Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0027 Ceratophyllum demersum HOM05D006413 ORTHO05D007722 7.7e-172 607.1 308 100.0
TAR629G2159 Trochodendron aralioides HOM05D006413 ORTHO05D007722 1.3e-49 201.1 241 52.3
Dinv34265 Davidia involucrata HOM05D006413 ORTHO05D007722 1.2e-47 194.5 234 48.7
GSVIVG01027488001 Vitis vinifera HOM05D006413 ORTHO05D007722 4.5e-47 192.6 223 50.7
Rhsim01G0182400 Rhododendron simsii HOM05D006413 ORTHO05D007722 5.9e-47 192.2 215 51.6
Actinidia28080 Actinidia chinensis HOM05D006413 ORTHO05D007722 5.0e-46 189.1 232 48.3
RcHm_v2.0_Chr2g0149491 Rosa chinensis HOM05D006413 ORTHO05D007722 5.0e-46 189.1 214 53.7
MD17G1162400 Malus domestica HOM05D006413 ORTHO05D007722 1.9e-45 187.2 227 50.7
MBI12_g23070_MAGBIO Magnolia biondii HOM05D006413 ORTHO05D007722 4.2e-45 186.0 255 46.3
CiPaw.02G050700 Carya illinoinensis HOM05D006413 ORTHO05D007722 5.5e-45 185.7 240 47.9
FAN02G2312 Fragaria x ananassa HOM05D006413 ORTHO05D007722 2.7e-44 183.3 219 53.0
FAN09G4880 Fragaria x ananassa HOM05D006413 ORTHO05D007722 2.7e-44 183.3 219 53.4
Duzib138G1460 Durio zibethinus HOM05D006413 ORTHO05D007722 3.6e-44 183.0 202 55.9
Thecc.01G329000 Theobroma cacao HOM05D006413 ORTHO05D007722 3.6e-44 183.0 202 54.5
FvH4_6g36970 Fragaria vesca HOM05D006413 ORTHO05D007722 4.7e-44 182.6 218 53.2
Nn1g00502 Nelumbo nucifera HOM05D006413 ORTHO05D007722 4.7e-44 182.6 251 46.2
Lsat_1_v5_gn_5_42660 Lactuca sativa HOM05D006413 ORTHO05D007722 6.1e-44 182.2 186 54.8
Atru.chr5.817 Acer truncatum HOM05D006413 ORTHO05D007722 8.0e-44 181.8 219 51.1
Gorai.008G133200 Gossypium raimondii HOM05D006413 ORTHO05D007722 8.0e-44 181.8 249 49.8
Cpa.g.sc57.58 Carica papaya HOM05D006413 ORTHO05D007722 1.0e-43 181.4 253 46.6
FAN14G2652 Fragaria x ananassa HOM05D006413 ORTHO05D007722 2.3e-43 180.3 218 52.8
Gohir.D12G122400 Gossypium hirsutum HOM05D006413 ORTHO05D007722 3.0e-43 179.9 249 49.4
Cfa002153 Carpinus fangiana HOM05D006413 ORTHO05D007722 5.2e-43 179.1 224 48.7
COL.COLO4_23085 Corchorus olitorius HOM05D006413 ORTHO05D007722 6.8e-43 178.7 200 53.0
QL05p084380 Quercus lobata HOM05D006413 ORTHO05D007722 6.8e-43 178.7 227 51.1
HPP92_025405 Vanilla planifolia HOM05D006413 ORTHO05D007722 6.8e-43 178.7 216 49.1
CANSAT01G2278 Cannabis sativa HOM05D006413 ORTHO05D007722 8.8e-43 178.3 255 48.6
Potri.002G183900 Populus trichocarpa HOM05D006413 ORTHO05D007722 8.8e-43 178.3 227 51.1
Sabra02G0131800 Salix brachista HOM05D006413 ORTHO05D007722 1.5e-42 177.6 226 51.3
Aa31LG1G28280 Aethionema arabicum HOM05D006413 ORTHO05D007722 3.4e-42 176.4 227 48.0
Gohir.A12G118600 Gossypium hirsutum HOM05D006413 ORTHO05D007722 3.4e-42 176.4 249 48.6
Glyma.13G372900 Glycine max HOM05D006413 ORTHO05D007722 5.7e-42 175.6 196 52.0
Phvul.005G185400 Phaseolus vulgaris HOM05D006413 ORTHO05D007722 5.7e-42 175.6 221 48.0
AT2G46915 Arabidopsis thaliana HOM05D006413 ORTHO05D007722 7.5e-42 175.3 197 52.3
vmacro12628 Vaccinium macrocarpon HOM05D006413 ORTHO05D007722 7.5e-42 175.3 223 49.8
HanXRQChr12g0379901 Helianthus annuus HOM05D006413 ORTHO05D007722 9.8e-42 174.9 179 53.6
Sc26g0002030 Simmondsia chinensis HOM05D006413 ORTHO05D007722 9.8e-42 174.9 213 49.8
VMungo1080G0934 Vigna mungo HOM05D006413 ORTHO05D007722 9.8e-42 174.9 224 48.7
ECA246G2509 Erigeron canadensis HOM05D006413 ORTHO05D007722 1.7e-41 174.1 195 51.8
Manes.01G237000 Manihot esculenta HOM05D006413 ORTHO05D007722 2.2e-41 173.7 221 51.1
SGA_v2.0_scaffold12G06253 Striga asiatica HOM05D006413 ORTHO05D007722 3.7e-41 172.9 226 50.9
TWI14G0709 Tripterygium wilfordii HOM05D006413 ORTHO05D007722 4.8e-41 172.6 249 45.0
Carub.0004s2964 Capsella rubella HOM05D006413 ORTHO05D007722 6.3e-41 172.2 222 49.1
CARHR142270 Cardamine hirsuta HOM05D006413 ORTHO05D007722 6.3e-41 172.2 193 51.3
ClCG09G001640 Citrullus lanatus HOM05D006413 ORTHO05D007722 6.3e-41 172.2 262 45.4
Oeu059793.1 Olea europaea HOM05D006413 ORTHO05D007722 6.3e-41 172.2 237 46.0
arahy.Tifrunner.gnm1.ann1.JWHJ24 Arachis hypogaea HOM05D006413 ORTHO05D007722 8.3e-41 171.8 240 44.6
MSTRG.12126 Avicennia marina HOM05D006413 ORTHO05D007722 1.1e-40 171.4 233 45.1
MELO3C024283.2 Cucumis melo HOM05D006413 ORTHO05D007722 1.8e-40 170.6 232 47.4
Psat5g305280 Pisum sativum HOM05D006413 ORTHO05D007722 1.8e-40 170.6 206 50.0
Cc11_g00050 Coffea canephora HOM05D006413 ORTHO05D007722 2.4e-40 170.2 217 48.8
Thhalv10001331m.g Eutrema salsugineum HOM05D006413 ORTHO05D007722 4.1e-40 169.5 218 47.2
Prupe.3G022900 Prunus persica HOM05D006413 ORTHO05D007722 4.1e-40 169.5 218 49.5
CsaV3_7G033700 Cucumis sativus L. HOM05D006413 ORTHO05D007722 5.4e-40 169.1 241 48.1
Ca_00994_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 9.1e-40 168.3 227 45.8
THA.LOC104802107 Tarenaya hassleriana HOM05D006413 ORTHO05D007722 9.1e-40 168.3 215 49.3
Eucgr.E00011 Eucalyptus grandis HOM05D006413 ORTHO05D007722 1.2e-39 167.9 204 50.0
BolC4t21760H Brassica oleracea HOM05D006413 ORTHO05D007722 1.6e-39 167.5 205 49.3
MD05G1207200 Malus domestica HOM05D006413 ORTHO05D007722 2.7e-39 166.8 216 49.1
Sopen03g012060 Solanum pennellii HOM05D006413 ORTHO05D007722 5.9e-39 165.6 221 46.2
Migut.G00788 Erythranthe guttata HOM05D006413 ORTHO05D007722 7.7e-39 165.2 263 44.1
Os06g0104000 Oryza sativa ssp. japonica HOM05D006413 ORTHO05D007722 1.0e-38 164.9 229 46.7
AUR62038031 Chenopodium quinoa HOM05D006413 ORTHO05D007722 1.7e-38 164.1 247 44.1
DCAR_001546 Daucus carota HOM05D006413 ORTHO05D007722 1.7e-38 164.1 218 47.7
Lj5g0015604 Lotus japonicus HOM05D006413 ORTHO05D007722 2.3e-38 163.7 226 46.5
EL10Ac1g00655 Beta vulgaris HOM05D006413 ORTHO05D007722 5.0e-38 162.5 225 46.2
Lj3g0007654 Lotus japonicus HOM05D006413 ORTHO05D007722 6.6e-38 162.2 226 46.0
Medtr2g101420 Medicago truncatula HOM05D006413 ORTHO05D007722 6.6e-38 162.2 220 46.4
Sp4g28940 Schrenkiella parvula HOM05D006413 ORTHO05D007722 6.6e-38 162.2 216 46.8
TPR.G31784 Trifolium pratense HOM05D006413 ORTHO05D007722 6.6e-38 162.2 210 46.7
C04p01070 Brassica napus HOM05D006413 ORTHO05D007722 8.6e-38 161.8 217 47.0
SEGI_13405 Sequoiadendron giganteum HOM05D006413 ORTHO05D007722 1.5e-37 161.0 216 43.1
PGR042G2300 Punica granatum HOM05D006413 ORTHO05D007722 1.9e-37 160.6 199 50.3
Ah.05g177080 Amaranthus hybridus HOM05D006413 ORTHO05D007722 5.5e-37 159.1 246 43.1
Aqoxy5G04399 Aquilegia oxysepala HOM05D006413 ORTHO05D007722 5.5e-37 159.1 233 44.2
BraA05t19093Z Brassica rapa HOM05D006413 ORTHO05D007722 7.2e-37 158.7 223 46.2
Glyma.19G019600 Glycine max HOM05D006413 ORTHO05D007722 7.2e-37 158.7 179 52.0
Zm00001eb268520 Zea mays HOM05D006413 ORTHO05D007722 2.8e-36 156.8 212 46.7
AUR62014504 Chenopodium quinoa HOM05D006413 ORTHO05D007722 3.6e-36 156.4 242 44.2
BcaC02g12635 Brassica carinata HOM05D006413 ORTHO05D007722 4.7e-36 156.0 214 45.3
AL4G46380 Arabidopsis lyrata HOM05D006413 ORTHO05D007722 8.0e-36 155.2 219 46.6
A05p00920 Brassica napus HOM05D006413 ORTHO05D007722 4.0e-35 152.9 225 43.6
CAN.G317.7 Capsicum annuum HOM05D006413 ORTHO05D007722 2.0e-34 150.6 214 43.9
Nitab4.5_0000911g0040 Nicotiana tabacum HOM05D006413 ORTHO05D007722 2.6e-34 150.2 240 41.2
Lalb_Chr24g0392741 Lupinus albus HOM05D006413 ORTHO05D007722 8.3e-33 145.2 188 46.3
Hund26914 Selenicereus undatus HOM05D006413 ORTHO05D007722 3.1e-32 143.3 231 43.3
ATR0579G084 Amborella trichopoda HOM05D006413 ORTHO05D007722 5.4e-32 142.5 171 51.5
PSO782G4045 Papaver somniferum HOM05D006413 ORTHO05D007722 2.3e-30 137.1 175 46.3
Pp3c4_17360 Physcomitrium patens HOM05D006413 ORTHO05D007722 1.5e-29 134.4 284 34.2
Psat2g176480 Pisum sativum HOM05D006413 ORTHO05D007722 2.5e-29 133.7 172 47.1
PSO063G3388 Papaver somniferum HOM05D006413 ORTHO05D007722 1.0e-27 128.3 201 43.3
Sed0002155 Sechium edule HOM05D006413 ORTHO05D007722 2.3e-27 127.1 88 75.0
Ca_30995_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 1.9e-24 117.5 84 70.2
Lj9A544G35 Lonicera japonica HOM05D006413 ORTHO05D007722 3.0e-22 110.2 90 64.4
CSS0016033 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 8.0e-20 102.1 63 81.0
CSS0017802 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 8.0e-20 102.1 63 81.0
Mapoly0083s0051 Marchantia polymorpha HOM05D006413 ORTHO05D007722 1.4e-19 101.3 73 68.5
Glyma.15G001000 Glycine max HOM05D006413 ORTHO05D007722 4.0e-19 99.8 60 80.0
SMO358G0223 Selaginella moellendorffii HOM05D006413 ORTHO05D007722 1.1e-16 91.7 67 64.2
Psat5g292640 Pisum sativum HOM05D006413 ORTHO05D007722 5.4e-16 89.4 71 63.4
CSS0026125 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 9.2e-16 88.6 158 39.2
Hma1.2p1_0074F.1_g038990 Hydrangea macrophylla HOM05D006413 ORTHO05D007722 1.2e-15 88.2 80 56.2
CSS0033391 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 3.5e-15 86.7 158 38.6
Nitab4.5_0000001g0010 Nicotiana tabacum HOM05D006413 ORTHO05D007722 3.1e-11 73.6 64 59.4
Solyc03g058437.1 Solanum lycopersicum HOM05D006413 ORTHO05D007722 1.5e-10 71.2 57 68.4


User provided reference genes

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