Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0008 Ceratophyllum demersum HOM05D003816 ORTHO05D004410 2.5e-49 198.4 93 100.0
TAR375G0902 Trochodendron aralioides HOM05D003816 ORTHO05D004410 1.7e-37 159.1 92 77.2
TAR629G2639 Trochodendron aralioides HOM05D003816 ORTHO05D004410 4.9e-37 157.5 92 77.2
PSO135G0392 Papaver somniferum HOM05D003816 ORTHO05D004410 6.4e-37 157.1 92 76.1
PSO384G0096 Papaver somniferum HOM05D003816 ORTHO05D004410 6.4e-37 157.1 92 76.1
Aqoxy7G02903 Aquilegia oxysepala HOM05D003816 ORTHO05D004410 1.1e-36 156.4 92 77.2
Nn1g04065 Nelumbo nucifera HOM05D003816 ORTHO05D004410 3.2e-36 154.8 92 78.3
MBI06_g33549_MAGBIO Magnolia biondii HOM05D003816 ORTHO05D004410 7.0e-36 153.7 92 75.0
Eucgr.A02683 Eucalyptus grandis HOM05D003816 ORTHO05D004410 1.6e-35 152.5 92 72.8
Hund14255 Selenicereus undatus HOM05D003816 ORTHO05D004410 2.0e-35 152.1 92 73.9
Phvul.007G077200 Phaseolus vulgaris HOM05D003816 ORTHO05D004410 2.7e-35 151.8 92 75.0
VMungo0720G2481 Vigna mungo HOM05D003816 ORTHO05D004410 2.7e-35 151.8 92 75.0
Ah.12g052090 Amaranthus hybridus HOM05D003816 ORTHO05D004410 6.0e-35 150.6 92 73.9
Ciclev10020944m.g Citrus clementina HOM05D003816 ORTHO05D004410 7.8e-35 150.2 92 70.7
Psat0s694g0040 Pisum sativum HOM05D003816 ORTHO05D004410 7.8e-35 150.2 92 73.9
QL09p012028 Quercus lobata HOM05D003816 ORTHO05D004410 7.8e-35 150.2 92 73.9
AUR62010771 Chenopodium quinoa HOM05D003816 ORTHO05D004410 1.0e-34 149.8 92 72.8
AUR62019773 Chenopodium quinoa HOM05D003816 ORTHO05D004410 1.0e-34 149.8 92 72.8
Glyma.10G229000 Glycine max HOM05D003816 ORTHO05D004410 1.0e-34 149.8 92 73.9
HPP92_003943 Vanilla planifolia HOM05D003816 ORTHO05D004410 1.0e-34 149.8 92 71.7
Dinv28361 Davidia involucrata HOM05D003816 ORTHO05D004410 1.3e-34 149.4 92 72.8
Os06g0505400 Oryza sativa ssp. japonica HOM05D003816 ORTHO05D004410 1.3e-34 149.4 92 71.7
Haze_00080 Corylus avellana HOM05D003816 ORTHO05D004410 1.7e-34 149.1 92 72.8
Dinv35291 Davidia involucrata HOM05D000662 ORTHO05D004410 1.7e-34 149.1 92 71.7
Cfa016328 Carpinus fangiana HOM05D003816 ORTHO05D004410 2.3e-34 148.7 92 72.8
Prupe.5G110300 Prunus persica HOM05D003816 ORTHO05D004410 2.3e-34 148.7 92 70.7
HanXRQChr14g0462661 Helianthus annuus HOM05D003816 ORTHO05D004410 3.9e-34 147.9 92 73.9
Lsat_1_v5_gn_2_133601 Lactuca sativa HOM05D003816 ORTHO05D004410 3.9e-34 147.9 92 71.7
PGR042G2117 Punica granatum HOM05D003816 ORTHO05D004410 3.9e-34 147.9 92 70.7
vmacro06596 Vaccinium macrocarpon HOM05D003816 ORTHO05D004410 3.9e-34 147.9 92 72.8
Glyma.20G164100 Glycine max HOM05D003816 ORTHO05D004410 5.0e-34 147.5 92 73.9
Nn1g01737 Nelumbo nucifera HOM05D003816 ORTHO05D004410 6.6e-34 147.1 92 70.7
Lj5g0016706 Lotus japonicus HOM05D003816 ORTHO05D004410 8.6e-34 146.7 92 72.8
Actinidia34174 Actinidia chinensis HOM05D003816 ORTHO05D004410 1.5e-33 146.0 92 71.7
TPR.G7761 Trifolium pratense HOM05D003816 ORTHO05D004410 1.5e-33 146.0 92 71.7
GSVIVG01019444001 Vitis vinifera HOM05D003816 ORTHO05D004410 1.5e-33 146.0 92 69.6
Sc07g0009900 Simmondsia chinensis HOM05D003816 ORTHO05D004410 1.9e-33 145.6 92 70.7
Cfa012263 Carpinus fangiana HOM05D000154 ORTHO05D004410 2.5e-33 145.2 92 68.5
Ca_10703_v3 Cicer arietinum L. HOM05D003816 ORTHO05D004410 2.5e-33 145.2 92 70.7
Lsat_1_v5_gn_8_6220 Lactuca sativa HOM05D003816 ORTHO05D004410 2.5e-33 145.2 92 71.7
Phvul.002G294300 Phaseolus vulgaris HOM05D003816 ORTHO05D004410 2.5e-33 145.2 92 68.5
Rhsim03G0196400 Rhododendron simsii HOM05D003816 ORTHO05D004410 2.5e-33 145.2 92 72.8
VMungo0251G3347 Vigna mungo HOM05D003816 ORTHO05D004410 2.5e-33 145.2 92 68.5
Glyma.08G019500 Glycine max HOM05D003816 ORTHO05D004410 3.3e-33 144.8 92 68.5
Lj4g0017897 Lotus japonicus HOM05D003816 ORTHO05D004410 4.3e-33 144.4 92 66.3
Sed0000969 Sechium edule HOM05D003816 ORTHO05D004410 4.3e-33 144.4 92 66.3
ATR0749G058 Amborella trichopoda HOM05D003816 ORTHO05D004410 5.6e-33 144.1 92 68.5
Lalb_Chr21g0305321 Lupinus albus HOM05D003816 ORTHO05D004410 5.6e-33 144.1 92 69.6
Haze_08729 Corylus avellana HOM05D003816 ORTHO05D004410 7.3e-33 143.7 92 67.4
DCAR_020292 Daucus carota HOM05D003816 ORTHO05D004410 7.3e-33 143.7 92 69.6
Manes.01G051000 Manihot esculenta HOM05D003816 ORTHO05D004410 7.3e-33 143.7 92 67.4
THA.LOC104809356 Tarenaya hassleriana HOM05D003816 ORTHO05D004410 7.3e-33 143.7 92 66.3
Actinidia22704 Actinidia chinensis HOM05D000059 ORTHO05D004410 9.5e-33 143.3 91 69.2
Actinidia27352 Actinidia chinensis HOM05D003816 ORTHO05D004410 9.5e-33 143.3 91 68.1
Lalb_Chr02g0141351 Lupinus albus HOM05D003816 ORTHO05D004410 9.5e-33 143.3 92 70.7
Manes.01G051301 Manihot esculenta HOM05D003816 ORTHO05D004410 9.5e-33 143.3 92 66.3
arahy.Tifrunner.gnm1.ann1.8C5G5Z Arachis hypogaea HOM05D003816 ORTHO05D004410 1.2e-32 142.9 92 67.4
FvH4_5g03580 Fragaria vesca HOM05D003816 ORTHO05D004410 1.2e-32 142.9 92 67.4
FAN04G0729 Fragaria x ananassa HOM05D003816 ORTHO05D004410 1.2e-32 142.9 92 67.4
FAN04G2543 Fragaria x ananassa HOM05D003816 ORTHO05D004410 1.2e-32 142.9 92 67.4
Manes.02G015300 Manihot esculenta HOM05D003816 ORTHO05D004410 1.2e-32 142.9 92 65.2
Oeu008845.1 Olea europaea HOM05D003816 ORTHO05D004410 1.2e-32 142.9 91 70.3
Oeu008846.1 Olea europaea HOM05D003816 ORTHO05D004410 1.2e-32 142.9 91 70.3
Potri.001G097500 Populus trichocarpa HOM05D003816 ORTHO05D004410 1.2e-32 142.9 92 67.4
AL8G37340 Arabidopsis lyrata HOM05D003816 ORTHO05D004410 1.6e-32 142.5 92 66.3
AT5G60750 Arabidopsis thaliana HOM05D003816 ORTHO05D004410 1.6e-32 142.5 92 66.3
Carub.0008s2143 Capsella rubella HOM05D003816 ORTHO05D004410 1.6e-32 142.5 92 66.3
CARHR274430 Cardamine hirsuta HOM05D003816 ORTHO05D004410 1.6e-32 142.5 92 66.3
Cpa.g.sc122.12 Carica papaya HOM05D003816 ORTHO05D004410 1.6e-32 142.5 92 68.5
Ca_10960_v3 Cicer arietinum L. HOM05D003816 ORTHO05D004410 1.6e-32 142.5 92 66.3
Ca_29631_v3 Cicer arietinum L. HOM05D003816 ORTHO05D004410 1.6e-32 142.5 92 66.3
Duzib068G1263 Durio zibethinus HOM05D003816 ORTHO05D004410 1.6e-32 142.5 92 66.3
Aa31LG1G12710 Aethionema arabicum HOM05D003816 ORTHO05D004410 2.1e-32 142.1 92 66.3
CSS0012674 Camellia sinensis var. sinensis HOM05D003816 ORTHO05D004410 2.1e-32 142.1 92 71.7
CSS0031532 Camellia sinensis var. sinensis HOM05D003816 ORTHO05D004410 2.1e-32 142.1 92 71.7
Cc02_g02150 Coffea canephora HOM05D003816 ORTHO05D004410 2.1e-32 142.1 92 68.5
FAN08G3004 Fragaria x ananassa HOM05D003816 ORTHO05D004410 2.1e-32 142.1 92 66.3
PGR031G1220 Punica granatum HOM05D003816 ORTHO05D004410 2.1e-32 142.1 92 66.3
QL02p032669 Quercus lobata HOM05D003816 ORTHO05D004410 2.1e-32 142.1 92 66.3
RcHm_v2.0_Chr7g0196131 Rosa chinensis HOM05D003816 ORTHO05D004410 2.1e-32 142.1 92 67.4
Sabra01G0073000 Salix brachista HOM05D000147 ORTHO05D002016 2.8e-32 141.7 92 66.3
Thecc.03G288800 Theobroma cacao HOM05D003816 ORTHO05D004410 2.8e-32 141.7 92 66.3
Zm00001eb032160 Zea mays HOM05D003816 ORTHO05D004410 2.8e-32 141.7 92 67.4
BcaB05g22667 Brassica carinata HOM05D003816 ORTHO05D004410 3.6e-32 141.4 92 65.2
BcaC03g13940 Brassica carinata HOM05D003816 ORTHO05D004410 3.6e-32 141.4 92 65.2
BNapus_Darmor_BZH_scaffold_38p00150 Brassica napus HOM05D003816 ORTHO05D004410 3.6e-32 141.4 92 65.2
C02p11490 Brassica napus HOM05D003816 ORTHO05D004410 3.6e-32 141.4 92 65.2
BolC2t07223H Brassica oleracea HOM05D003816 ORTHO05D004410 3.6e-32 141.4 92 65.2
BraA02t05706Z Brassica rapa HOM05D003816 ORTHO05D004410 3.6e-32 141.4 92 65.2
CiPaw.12G087600 Carya illinoinensis HOM05D003816 ORTHO05D004410 3.6e-32 141.4 92 65.2
Dinv37574 Davidia involucrata HOM05D003816 ORTHO05D004410 3.6e-32 141.4 92 69.6
Eucgr.D01795 Eucalyptus grandis HOM05D003816 ORTHO05D004410 3.6e-32 141.4 92 65.2
Thhalv10013994m.g Eutrema salsugineum HOM05D003816 ORTHO05D004410 3.6e-32 141.4 92 65.2
Sp6g22330 Schrenkiella parvula HOM05D003816 ORTHO05D004410 3.6e-32 141.4 92 65.2
Atru.chr9.2089 Acer truncatum HOM05D003816 ORTHO05D004410 4.7e-32 141.0 92 65.2
Glyma.05G213000 Glycine max HOM05D003816 ORTHO05D004410 4.7e-32 141.0 92 67.4
Actinidia08605 Actinidia chinensis HOM05D003816 ORTHO05D004410 6.2e-32 140.6 92 69.6
arahy.Tifrunner.gnm1.ann1.E6YVBJ Arachis hypogaea HOM05D003816 ORTHO05D004410 6.2e-32 140.6 92 66.3
Atru.chr1.320 Acer truncatum HOM05D003816 ORTHO05D004410 8.1e-32 140.2 92 68.5
COL.COLO4_08337 Corchorus olitorius HOM05D000059 ORTHO05D004410 8.1e-32 140.2 92 65.2
CsaV3_5G000910 Cucumis sativus L. HOM05D003816 ORTHO05D004410 8.1e-32 140.2 92 64.1
Gorai.003G084200 Gossypium raimondii HOM05D003816 ORTHO05D004410 8.1e-32 140.2 92 63.0
Lalb_Chr09g0332761 Lupinus albus HOM05D003816 ORTHO05D004410 8.1e-32 140.2 92 65.2
TWI15G0065 Tripterygium wilfordii HOM05D003816 ORTHO05D004410 8.1e-32 140.2 92 65.2
FAN13G2496 Fragaria x ananassa HOM05D003816 ORTHO05D004410 1.1e-31 139.8 92 66.3
vmacro13989 Vaccinium macrocarpon HOM05D003816 ORTHO05D004410 1.1e-31 139.8 91 67.0
Gohir.A08G113000 Gossypium hirsutum HOM05D003816 ORTHO05D004410 1.4e-31 139.4 92 64.1
HanXRQChr05g0144401 Helianthus annuus HOM05D003816 ORTHO05D004410 1.8e-31 139.0 92 67.4
Medtr1g099420 Medicago truncatula HOM05D003816 ORTHO05D004410 1.8e-31 139.0 92 67.4
Oeu063040.1 Olea europaea HOM05D003816 ORTHO05D004410 1.8e-31 139.0 91 68.1
Psat7g029000 Pisum sativum HOM05D003816 ORTHO05D004410 1.8e-31 139.0 92 65.2
Rhsim07G0086200 Rhododendron simsii HOM05D000059 ORTHO05D000128 1.8e-31 139.0 91 67.0
Gohir.D08G133800 Gossypium hirsutum HOM05D003816 ORTHO05D004410 2.3e-31 138.7 92 64.1
Gorai.004G136900 Gossypium raimondii HOM05D003816 ORTHO05D004410 2.3e-31 138.7 92 64.1
Potri.003G133800 Populus trichocarpa HOM05D003816 ORTHO05D004410 2.3e-31 138.7 92 65.2
CAN.G532.69 Capsicum annuum HOM05D003816 ORTHO05D004410 3.1e-31 138.3 92 67.4
MELO3C005852.2 Cucumis melo HOM05D003816 ORTHO05D004410 3.1e-31 138.3 92 64.1
MD14G1115700 Malus domestica HOM05D003816 ORTHO05D004410 3.1e-31 138.3 92 67.4
Dinv07571 Davidia involucrata HOM05D003816 ORTHO05D004410 4.0e-31 137.9 90 67.8
Lj3P915T21 Lonicera japonica HOM05D003816 ORTHO05D004410 4.0e-31 137.9 92 67.4
Migut.A00701 Erythranthe guttata HOM05D003816 ORTHO05D004410 5.2e-31 137.5 91 68.1
ECA233G6188 Erigeron canadensis HOM05D003816 ORTHO05D004410 6.8e-31 137.1 92 67.4
Gohir.A02G104000 Gossypium hirsutum HOM05D003816 ORTHO05D004410 6.8e-31 137.1 92 62.0
Gohir.D03G079700 Gossypium hirsutum HOM05D003816 ORTHO05D004410 6.8e-31 137.1 92 62.0
PGSC0003DMG401012173 Solanum tuberosum HOM05D003816 ORTHO05D004410 6.8e-31 137.1 92 66.3
ClCG01G000780 Citrullus lanatus HOM05D003816 ORTHO05D004410 8.9e-31 136.7 92 63.0
Duzib205G1652 Durio zibethinus HOM05D003816 ORTHO05D004410 8.9e-31 136.7 92 64.1
Gohir.A11G023400 Gossypium hirsutum HOM05D003816 ORTHO05D004410 8.9e-31 136.7 92 63.0
Gohir.D11G023100 Gossypium hirsutum HOM05D003816 ORTHO05D004410 8.9e-31 136.7 92 63.0
Gorai.007G024900 Gossypium raimondii HOM05D003816 ORTHO05D004410 8.9e-31 136.7 92 63.0
Nitab4.5_0000966g0010 Nicotiana tabacum HOM05D003816 ORTHO05D004410 8.9e-31 136.7 92 66.3
Sed0004130 Sechium edule HOM05D003816 ORTHO05D004410 8.9e-31 136.7 92 63.0
SGA_v2.0_scaffold173G39120 Striga asiatica HOM05D003816 ORTHO05D004410 8.9e-31 136.7 91 64.8
TPR.G3391 Trifolium pratense HOM05D003816 ORTHO05D004410 8.9e-31 136.7 92 63.0
unitig_0.g2849 Utricularia gibba HOM05D003816 ORTHO05D004410 1.2e-30 136.3 92 66.3
Lalb_Chr05g0224371 Lupinus albus HOM05D003816 ORTHO05D004410 1.5e-30 136.0 92 64.1
Sabra03G0096100 Salix brachista HOM05D003816 ORTHO05D004410 1.5e-30 136.0 92 64.1
Solyc08g081750.3 Solanum lycopersicum HOM05D003816 ORTHO05D004410 2.0e-30 135.6 92 65.2
Sopen08g030050 Solanum pennellii HOM05D003816 ORTHO05D004410 2.0e-30 135.6 92 65.2
Medtr8g099085 Medicago truncatula HOM05D003816 ORTHO05D004410 2.6e-30 135.2 92 62.0
Peaxi162Scf00074g01527 Petunia axillaris HOM05D003816 ORTHO05D004410 2.6e-30 135.2 92 65.2
CiPaw.11G127500 Carya illinoinensis HOM05D003816 ORTHO05D004410 3.4e-30 134.8 92 60.9
MD06G1095700 Malus domestica HOM05D003816 ORTHO05D004410 4.4e-30 134.4 92 66.3
MSTRG.11945 Avicennia marina HOM05D003816 ORTHO05D004410 5.8e-30 134.0 91 64.8
GSVIVG01028788001 Vitis vinifera HOM05D003816 ORTHO05D004410 7.5e-30 133.7 92 63.0
unitig_88.g27629 Utricularia gibba HOM05D003816 ORTHO05D004410 9.8e-30 133.3 92 65.2
EL10Ac5g12851 Beta vulgaris HOM05D003816 ORTHO05D004410 1.3e-29 132.9 92 63.0
Cc08_g15460 Coffea canephora HOM05D003816 ORTHO05D004410 1.3e-29 132.9 91 65.9
Lj2P175T52 Lonicera japonica HOM05D003816 ORTHO05D004410 1.1e-28 129.8 91 61.5
DCAR_006850 Daucus carota HOM05D003816 ORTHO05D004410 1.4e-28 129.4 91 63.7
CANSAT21G2538 Cannabis sativa HOM05D003816 ORTHO05D004410 1.9e-28 129.0 92 64.1
Pp3c2_33420 Physcomitrium patens HOM05D003816 ORTHO05D004410 9.2e-28 126.7 92 59.8
CSS0006908 Camellia sinensis var. sinensis HOM05D003816 ORTHO05D004410 3.9e-26 121.3 91 61.5
CSS0019424 Camellia sinensis var. sinensis HOM05D003816 ORTHO05D004410 3.9e-26 121.3 91 61.5
SEGI_16728 Sequoiadendron giganteum HOM05D003816 ORTHO05D004410 3.9e-26 121.3 92 57.6
CSS0016588 Camellia sinensis var. sinensis HOM05D003816 ORTHO05D004410 4.3e-25 117.9 92 63.0
Mapoly0154s0029 Marchantia polymorpha HOM05D003816 ORTHO05D004410 9.5e-25 116.7 92 54.3
AagrBONN_evm.TU.Sc2ySwM_228.1353 Anthoceros agrestis HOM05D003816 ORTHO05D004410 1.2e-24 116.3 92 56.5
Nitab4.5_0007898g0030 Nicotiana tabacum HOM05D003816 ORTHO05D004410 1.6e-24 115.9 80 65.0
SMO137G0072 Selaginella moellendorffii HOM05D003816 ORTHO05D004410 1.6e-24 115.9 92 54.3
CDE01G0214 Ceratophyllum demersum HOM05D003816 ORTHO05D004410 4.7e-24 114.4 61 90.2
SEGI_22893 Sequoiadendron giganteum HOM05D003816 ORTHO05D004410 3.1e-23 111.7 92 51.1
DCAR_008524 Daucus carota HOM05D003816 ORTHO05D004410 5.8e-22 107.5 91 53.8
SHI07095 Sapria himalayana HOM05D003816 ORTHO05D004410 5.8e-22 107.5 92 55.4
ATR0749G066 Amborella trichopoda HOM05D003816 ORTHO05D004410 1.7e-21 105.9 67 68.7
MSTRG.1834 Avicennia marina HOM05D003816 ORTHO05D004410 1.2e-19 99.8 78 55.1
PRCOL_00000126 Prasinoderma coloniale HOM05D003816 ORTHO05D004410 4.4e-14 81.3 92 45.7
ATR0665G060 Amborella trichopoda HOM05D003816 ORTHO05D004410 1.3e-13 79.7 55 67.3
MCO04G312 Micromonas commoda HOM05D003816 ORTHO05D004410 8.4e-13 77.0 92 42.4


User provided reference genes

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