Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G1243 Ceratophyllum demersum HOM05D003158 ORTHO05D003560 8.9e-93 343.6 172 100.0
CDE04G3103 Ceratophyllum demersum HOM05D003158 ORTHO05D003560 2.0e-76 289.3 206 73.8
HanXRQChr16g0523401 Helianthus annuus HOM05D003158 ORTHO05D003560 2.6e-15 86.3 148 38.5
Dinv32397 Davidia involucrata HOM05D003158 ORTHO05D003560 4.4e-15 85.5 142 36.6
Thecc.01G372700 Theobroma cacao HOM05D003158 ORTHO05D003560 4.4e-15 85.5 127 42.5
Lsat_1_v5_gn_4_37561 Lactuca sativa HOM05D003158 ORTHO05D003560 7.4e-15 84.7 133 37.6
PGSC0003DMG400000142 Solanum tuberosum HOM05D003158 ORTHO05D003560 7.4e-15 84.7 144 36.8
Solyc01g094040.3 Solanum lycopersicum HOM05D003158 ORTHO05D003560 9.7e-15 84.3 144 36.1
CiPaw.02G165400 Carya illinoinensis HOM05D003158 ORTHO05D003560 1.3e-14 84.0 123 37.4
Duzib138G1748 Durio zibethinus HOM05D003158 ORTHO05D003560 2.2e-14 83.2 127 40.9
Sopen01g037860 Solanum pennellii HOM05D003158 ORTHO05D003560 2.2e-14 83.2 144 36.1
CSS0031380 Camellia sinensis var. sinensis HOM05D003158 ORTHO05D003560 3.7e-14 82.4 140 42.9
Sed0020500 Sechium edule HOM05D003158 ORTHO05D003560 3.7e-14 82.4 146 36.3
ClCG06G000290 Citrullus lanatus HOM05D003158 ORTHO05D003560 4.8e-14 82.0 112 42.0
Gohir.D07G151400 Gossypium hirsutum HOM05D003158 ORTHO05D003560 4.8e-14 82.0 111 42.3
Rhsim01G0161100 Rhododendron simsii HOM05D003158 ORTHO05D003560 4.8e-14 82.0 111 42.3
Gohir.A07G145200 Gossypium hirsutum HOM05D003158 ORTHO05D003560 6.3e-14 81.6 131 42.7
HPP92_023385 Vanilla planifolia HOM05D003158 ORTHO05D003560 8.2e-14 81.3 135 36.3
GSVIVG01027562001 Vitis vinifera HOM05D003158 ORTHO05D003560 1.4e-13 80.5 127 37.0
Ciclev10022194m.g Citrus clementina HOM05D003158 ORTHO05D003560 2.4e-13 79.7 148 35.1
AUR62004253 Chenopodium quinoa HOM05D003158 ORTHO05D003560 3.1e-13 79.3 112 41.1
AUR62042743 Chenopodium quinoa HOM05D003158 ORTHO05D003560 3.1e-13 79.3 104 41.3
Atru.chr5.356 Acer truncatum HOM05D003158 ORTHO05D003560 4.1e-13 79.0 127 40.9
CsaV3_6G006080 Cucumis sativus L. HOM05D003158 ORTHO05D003560 4.1e-13 79.0 131 37.4
DCAR_006883 Daucus carota HOM05D003158 ORTHO05D003560 4.1e-13 79.0 131 38.2
Lj7C525T12 Lonicera japonica HOM05D003158 ORTHO05D003560 4.1e-13 79.0 152 32.2
Nitab4.5_0002436g0050 Nicotiana tabacum HOM05D003158 ORTHO05D003560 5.3e-13 78.6 158 35.4
Nitab4.5_0005340g0030 Nicotiana tabacum HOM05D003158 ORTHO05D003560 6.9e-13 78.2 158 33.5
Gorai.001G173300 Gossypium raimondii HOM05D003158 ORTHO05D003560 1.2e-12 77.4 109 41.3
Potri.002G150600 Populus trichocarpa HOM05D003158 ORTHO05D003560 1.2e-12 77.4 111 39.6
MBI04_g26203_MAGBIO Magnolia biondii HOM05D003158 ORTHO05D003560 2.0e-12 76.6 159 34.0
Medtr7g075770 Medicago truncatula HOM05D003158 ORTHO05D003560 2.6e-12 76.3 191 33.5
Peaxi162Scf00988g00320 Petunia axillaris HOM05D003158 ORTHO05D003560 2.6e-12 76.3 125 37.6
CSS0032795 Camellia sinensis var. sinensis HOM05D003158 ORTHO05D003560 3.4e-12 75.9 173 35.8
Haze_16726 Corylus avellana HOM05D003158 ORTHO05D003560 5.9e-12 75.1 123 38.2
PSO478G2600 Papaver somniferum HOM05D003158 ORTHO05D003560 5.9e-12 75.1 103 38.8
EL10Ac1g00920 Beta vulgaris HOM05D003158 ORTHO05D003560 7.7e-12 74.7 102 42.2
Cfa001832 Carpinus fangiana HOM05D000524 ORTHO05D000381 7.7e-12 74.7 149 34.2
Potri.014G072700 Populus trichocarpa HOM05D003158 ORTHO05D003560 7.7e-12 74.7 155 34.8
Oeu026237.1 Olea europaea HOM05D003158 ORTHO05D003560 1.0e-11 74.3 160 33.1
Hund27341 Selenicereus undatus HOM05D003158 ORTHO05D003560 1.3e-11 73.9 107 40.2
Sc23g0003430 Simmondsia chinensis HOM05D003158 ORTHO05D003560 1.3e-11 73.9 95 42.1
ATR0661G345 Amborella trichopoda HOM05D003158 ORTHO05D003560 1.7e-11 73.6 110 42.7
Manes.01G264500 Manihot esculenta HOM05D003158 ORTHO05D003560 1.7e-11 73.6 127 36.2
VMungo1383G0950 Vigna mungo HOM05D003158 ORTHO05D003560 1.7e-11 73.6 106 39.6
Duzib268G0200 Durio zibethinus HOM05D003158 ORTHO05D003560 2.2e-11 73.2 127 37.8
PSO782G3191 Papaver somniferum HOM05D003158 ORTHO05D003560 2.2e-11 73.2 103 38.8
SGA_v2.0_scaffold43G16463 Striga asiatica HOM05D003158 ORTHO05D003560 2.2e-11 73.2 109 40.4
COL.COLO4_12587 Corchorus olitorius HOM05D003158 ORTHO05D003560 2.9e-11 72.8 165 33.9
Eucgr.D02434 Eucalyptus grandis HOM05D003158 ORTHO05D003560 2.9e-11 72.8 113 38.9
Cpa.g.sc18.153 Carica papaya HOM05D003158 ORTHO05D003560 3.8e-11 72.4 127 37.0
Sabra14G0051900 Salix brachista HOM05D003158 ORTHO05D003560 5.0e-11 72.0 107 38.3
SalBow5G4846 Salvia bowleyana HOM05D003158 ORTHO05D003560 6.5e-11 71.6 109 39.4
TWI59G0507 Tripterygium wilfordii HOM05D003158 ORTHO05D003560 6.5e-11 71.6 167 34.7
vmacro20993 Vaccinium macrocarpon HOM05D003158 ORTHO05D003560 6.5e-11 71.6 89 42.7
PGR031G1765 Punica granatum HOM05D003158 ORTHO05D003560 1.1e-10 70.9 176 33.5
CSS0030800 Camellia sinensis var. sinensis HOM05D003158 ORTHO05D003560 1.4e-10 70.5 124 34.7
MELO3C022509.2 Cucumis melo HOM05D003158 ORTHO05D003560 1.9e-10 70.1 94 42.6
Hma1.2p1_0532F.1_g173415 Hydrangea macrophylla HOM05D003158 ORTHO05D003560 1.9e-10 70.1 199 31.2
Phvul.008G074200 Phaseolus vulgaris HOM05D003158 ORTHO05D003560 1.9e-10 70.1 94 41.5
ECA234G4259 Erigeron canadensis HOM05D003158 ORTHO05D003560 3.2e-10 69.3 116 38.8
FAN01G1454 Fragaria x ananassa HOM05D003158 ORTHO05D003560 4.2e-10 68.9 86 44.2
MD02G1199000 Malus domestica HOM05D003158 ORTHO05D003560 4.2e-10 68.9 110 39.1
Rhsim01G0161200 Rhododendron simsii HOM05D003158 ORTHO05D003560 4.2e-10 68.9 122 37.7
Ca_07839_v3 Cicer arietinum L. HOM05D003158 ORTHO05D003560 5.5e-10 68.6 148 32.4
Cc02_g36380 Coffea canephora HOM05D003158 ORTHO05D003560 5.5e-10 68.6 109 37.6
Glyma.18G223900 Glycine max HOM05D003158 ORTHO05D003560 5.5e-10 68.6 110 36.4
arahy.Tifrunner.gnm1.ann1.4ZPK1I Arachis hypogaea HOM05D003158 ORTHO05D003560 7.2e-10 68.2 94 39.4
FAN03G1209 Fragaria x ananassa HOM05D003158 ORTHO05D003560 7.2e-10 68.2 86 44.2
ATR0307G078 Amborella trichopoda HOM05D003158 ORTHO05D003560 1.2e-09 67.4 96 37.5
arahy.Tifrunner.gnm1.ann1.YQF4QR Arachis hypogaea HOM05D003158 ORTHO05D003560 1.2e-09 67.4 94 39.4
Aqoxy5G03941 Aquilegia oxysepala HOM05D003158 ORTHO05D003560 1.6e-09 67.0 111 36.9
FAN10G2980 Fragaria x ananassa HOM05D003158 ORTHO05D003560 1.6e-09 67.0 86 44.2
FAN10G4201 Fragaria x ananassa HOM05D003158 ORTHO05D003560 1.6e-09 67.0 86 44.2
RcHm_v2.0_Chr1g0351281 Rosa chinensis HOM05D003158 ORTHO05D003560 1.6e-09 67.0 93 47.3
Lalb_Chr01g0021261 Lupinus albus HOM05D003158 ORTHO05D003560 2.1e-09 66.6 96 39.6
FvH4_7g12470 Fragaria vesca HOM05D003158 ORTHO05D003560 3.6e-09 65.9 86 43.0
FAN06G3727 Fragaria x ananassa HOM05D003158 ORTHO05D003560 3.6e-09 65.9 86 43.0
FAN06G4544 Fragaria x ananassa HOM05D003158 ORTHO05D003560 3.6e-09 65.9 86 43.0
Actinidia33455 Actinidia chinensis HOM05D003158 ORTHO05D003560 4.7e-09 65.5 113 38.9
TAR629G2043 Trochodendron aralioides HOM05D003158 ORTHO05D003560 4.7e-09 65.5 104 35.6
GSVIVG01037359001 Vitis vinifera HOM05D003158 ORTHO05D003560 4.7e-09 65.5 101 36.6
Psat0ss4236g0240 Pisum sativum HOM05D003158 ORTHO05D003560 6.1e-09 65.1 116 35.3
Migut.N01585 Erythranthe guttata HOM05D003158 ORTHO05D003560 8.0e-09 64.7 109 35.8
Zm00001eb200430 Zea mays HOM05D003158 ORTHO05D003560 1.4e-08 63.9 133 35.3
Nitab4.5_0002372g0060 Nicotiana tabacum HOM05D003158 ORTHO05D003560 1.8e-08 63.5 116 34.5
EL10Ac4g10084 Beta vulgaris HOM05D003158 ORTHO05D003560 2.3e-08 63.2 110 32.7
COL.COLO4_06622 Corchorus olitorius HOM05D003158 ORTHO05D003560 2.3e-08 63.2 125 31.2
PSO339G6483 Papaver somniferum HOM05D003158 ORTHO05D003560 3.0e-08 62.8 102 37.3
TAR633G2256 Trochodendron aralioides HOM05D003158 ORTHO05D003560 3.0e-08 62.8 106 36.8
Nn6g34346 Nelumbo nucifera HOM05D003158 ORTHO05D003560 5.2e-08 62.0 144 31.9
HPP92_003586 Vanilla planifolia HOM05D003158 ORTHO05D003560 6.7e-08 61.6 111 36.0
TPR.G12345 Trifolium pratense HOM05D003158 ORTHO05D003560 8.8e-08 61.2 125 33.6
Prupe.2G149300 Prunus persica HOM05D003158 ORTHO05D003560 2.0e-07 60.1 139 33.1
Dinv22196 Davidia involucrata HOM05D003158 ORTHO05D003560 2.6e-07 59.7 120 34.2
Hund07418 Selenicereus undatus HOM05D003158 ORTHO05D003560 2.6e-07 59.7 89 37.1
MBI13_g09207_MAGBIO Magnolia biondii HOM05D003158 ORTHO05D003560 3.3e-07 59.3 100 35.0
Nn7g36905 Nelumbo nucifera HOM05D003158 ORTHO05D003560 3.3e-07 59.3 114 35.1
Lj1g0016529 Lotus japonicus HOM05D003158 ORTHO05D003560 4.4e-07 58.9 96 35.4
TAR623G1391 Trochodendron aralioides HOM05D003158 ORTHO05D003560 4.4e-07 58.9 114 32.5
Aqoxy2G00508 Aquilegia oxysepala HOM05D003158 ORTHO05D003560 7.4e-07 58.2 127 30.7
arahy.Tifrunner.gnm1.ann1.FW4L9V Arachis hypogaea HOM05D003158 ORTHO05D003560 7.4e-07 58.2 105 36.2
arahy.Tifrunner.gnm1.ann1.Z71ZTI Arachis hypogaea HOM05D003158 ORTHO05D003560 7.4e-07 58.2 104 33.7
Sc09g0001140 Simmondsia chinensis HOM05D003158 ORTHO05D003560 9.7e-07 57.8 106 33.0
Migut.D00682 Erythranthe guttata HOM05D003158 ORTHO05D003560 1.7e-06 57.0 106 34.9
Os11g0491500 Oryza sativa ssp. japonica HOM05D003158 ORTHO05D003560 1.7e-06 57.0 143 30.8
MBI04_g41104_MAGBIO Magnolia biondii HOM05D003158 ORTHO05D003560 2.8e-06 56.2 98 36.7
Sabra02G0119000 Salix brachista HOM05D003158 ORTHO05D003560 4.8e-06 55.5 88 36.4


User provided reference genes

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