Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G1202 Ceratophyllum demersum HOM05D007218 ORTHO05D008812 6.5e-102 374.0 183 100.0
CDE02G4644 Ceratophyllum demersum HOM05D007218 ORTHO05D008812 7.5e-58 227.6 171 70.2
MBI04_g36328_MAGBIO Magnolia biondii HOM05D007218 ORTHO05D008812 9.6e-45 184.1 188 52.7
TAR375G1119 Trochodendron aralioides HOM05D007218 ORTHO05D008812 3.2e-40 169.1 183 53.0
Nn1g00887 Nelumbo nucifera HOM05D007218 ORTHO05D008812 6.6e-38 161.4 177 54.2
Manes.01G272400 Manihot esculenta HOM05D007218 ORTHO05D008812 4.3e-37 158.7 185 49.2
Sabra14G0033400 Salix brachista HOM05D007218 ORTHO05D008812 4.3e-37 158.7 138 55.8
BcaC02g10152 Brassica carinata HOM05D007218 ORTHO05D008812 7.3e-37 157.9 179 49.2
C04p32200 Brassica napus HOM05D007218 ORTHO05D008812 9.6e-37 157.5 179 48.6
BolC4t24771H Brassica oleracea HOM05D007218 ORTHO05D008812 9.6e-37 157.5 179 48.6
Dinv43633 Davidia involucrata HOM05D007218 ORTHO05D008812 1.3e-36 157.1 137 58.4
Eucgr.D01515 Eucalyptus grandis HOM05D007218 ORTHO05D008812 1.3e-36 157.1 138 56.5
Potri.014G045600 Populus trichocarpa HOM05D007218 ORTHO05D008812 1.3e-36 157.1 138 55.8
A04p01650 Brassica napus HOM05D007218 ORTHO05D008812 2.1e-36 156.4 179 48.6
BraA04t15889Z Brassica rapa HOM05D007218 ORTHO05D008812 2.1e-36 156.4 179 48.6
ATR0057G039 Amborella trichopoda HOM05D007218 ORTHO05D008812 2.8e-36 156.0 125 60.8
COL.COLO4_12426 Corchorus olitorius HOM05D001866 ORTHO05D001915 2.8e-36 156.0 121 62.0
BcaB02g08171 Brassica carinata HOM05D007218 ORTHO05D008812 3.6e-36 155.6 179 48.6
Actinidia12651 Actinidia chinensis HOM05D007218 ORTHO05D008812 4.8e-36 155.2 134 58.2
EL10Ac1g00779 Beta vulgaris HOM05D007218 ORTHO05D008812 4.8e-36 155.2 146 54.8
Cpa.g.sc101.26 Carica papaya HOM05D007218 ORTHO05D008812 4.8e-36 155.2 152 55.3
Gohir.A08G059200 Gossypium hirsutum HOM05D007218 ORTHO05D008812 4.8e-36 155.2 150 55.3
TWI59G0129 Tripterygium wilfordii HOM05D007218 ORTHO05D008812 8.1e-36 154.5 184 47.8
Gohir.D08G068400 Gossypium hirsutum HOM05D007218 ORTHO05D008812 1.1e-35 154.1 164 50.0
Gorai.004G071600 Gossypium raimondii HOM05D007218 ORTHO05D008812 1.1e-35 154.1 164 50.0
Duzib133G0872 Durio zibethinus HOM05D007218 ORTHO05D008812 2.4e-35 152.9 121 61.2
PSO675G3278 Papaver somniferum HOM05D007218 ORTHO05D008812 2.4e-35 152.9 187 47.1
CSS0012991 Camellia sinensis var. sinensis HOM05D007218 ORTHO05D008812 3.1e-35 152.5 128 60.2
PGR004G1942 Punica granatum HOM05D007218 ORTHO05D008812 3.1e-35 152.5 182 48.4
GSVIVG01018250001 Vitis vinifera HOM05D007218 ORTHO05D008812 3.1e-35 152.5 137 57.7
Atru.chr5.157 Acer truncatum HOM05D007218 ORTHO05D008812 4.0e-35 152.1 129 56.6
Hma1.2p1_0041F.1_g025320 Hydrangea macrophylla HOM05D007218 ORTHO05D008812 4.0e-35 152.1 132 55.3
Os07g0490400 Oryza sativa ssp. japonica HOM05D007218 ORTHO05D008812 1.2e-34 150.6 162 52.5
Rhsim11G0040600 Rhododendron simsii HOM05D007218 ORTHO05D008812 1.2e-34 150.6 128 59.4
Sp5g02850 Schrenkiella parvula HOM05D007218 ORTHO05D008812 1.2e-34 150.6 126 56.3
SpUn0080_0030 Schrenkiella parvula HOM05D007218 ORTHO05D008812 1.2e-34 150.6 126 56.3
Nitab4.5_0010261g0010 Nicotiana tabacum HOM05D007218 ORTHO05D008812 2.0e-34 149.8 135 55.6
Cfa011087 Carpinus fangiana HOM05D007218 ORTHO05D008812 3.4e-34 149.1 180 50.0
Ah.05g173180 Amaranthus hybridus HOM05D007218 ORTHO05D008812 4.5e-34 148.7 130 55.4
CAN.G108.55 Capsicum annuum HOM05D007218 ORTHO05D008812 4.5e-34 148.7 135 54.1
CiPaw.14G021500 Carya illinoinensis HOM05D007218 ORTHO05D008812 4.5e-34 148.7 134 56.0
Ciclev10021814m.g Citrus clementina HOM05D007218 ORTHO05D008812 4.5e-34 148.7 169 47.9
Lj3g0011179 Lotus japonicus HOM05D007218 ORTHO05D008812 4.5e-34 148.7 132 56.8
QL04p030910 Quercus lobata HOM05D007218 ORTHO05D008812 4.5e-34 148.7 176 47.2
arahy.Tifrunner.gnm1.ann1.63W3DY Arachis hypogaea HOM05D007218 ORTHO05D008812 5.8e-34 148.3 123 60.2
arahy.Tifrunner.gnm1.ann1.DN3U87 Arachis hypogaea HOM05D007218 ORTHO05D008812 5.8e-34 148.3 123 60.2
Sc26g0001500 Simmondsia chinensis HOM05D007218 ORTHO05D008812 5.8e-34 148.3 187 46.5
Cc02_g24950 Coffea canephora HOM05D007218 ORTHO05D008812 7.6e-34 147.9 129 55.8
Aa31LG10G14480 Aethionema arabicum HOM05D007218 ORTHO05D008812 9.9e-34 147.5 146 52.7
THA.LOC104817195 Tarenaya hassleriana HOM05D007218 ORTHO05D008812 9.9e-34 147.5 191 45.0
Thecc.01G392800 Theobroma cacao HOM05D007218 ORTHO05D008812 9.9e-34 147.5 121 59.5
CsaV3_3G007570 Cucumis sativus L. HOM05D007218 ORTHO05D008812 1.3e-33 147.1 168 48.2
Glyma.03G114100 Glycine max HOM05D007218 ORTHO05D008812 1.3e-33 147.1 134 53.0
CARHR170690 Cardamine hirsuta HOM05D007218 ORTHO05D008812 1.7e-33 146.7 181 47.5
Hund27402 Selenicereus undatus HOM05D007218 ORTHO05D008812 2.2e-33 146.4 181 47.0
AUR62013730 Chenopodium quinoa HOM05D007218 ORTHO05D008812 2.9e-33 146.0 141 50.4
Solyc10g039270.2 Solanum lycopersicum HOM05D007218 ORTHO05D008812 2.9e-33 146.0 135 53.3
Sopen10g012160 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-33 146.0 135 53.3
VMungo0331G1963 Vigna mungo HOM05D007218 ORTHO05D008812 3.8e-33 145.6 138 53.6
MELO3C005979.2 Cucumis melo HOM05D007218 ORTHO05D008812 4.9e-33 145.2 143 52.4
AUR62023423 Chenopodium quinoa HOM05D007218 ORTHO05D008812 6.4e-33 144.8 131 52.7
Glyma.07G112600 Glycine max HOM05D007218 ORTHO05D008812 8.4e-33 144.4 177 45.2
Phvul.010G052000 Phaseolus vulgaris HOM05D007218 ORTHO05D008812 1.1e-32 144.1 179 43.6
PGSC0003DMG400004328 Solanum tuberosum HOM05D007218 ORTHO05D008812 1.1e-32 144.1 127 57.5
Oeu024171.1 Olea europaea HOM05D007218 ORTHO05D008812 1.9e-32 143.3 136 52.9
Aqoxy7G01797 Aquilegia oxysepala HOM05D007218 ORTHO05D008812 2.4e-32 142.9 147 53.1
Thhalv10006207m.g Eutrema salsugineum HOM05D007218 ORTHO05D008812 2.4e-32 142.9 129 55.0
Ca_14058_v3 Cicer arietinum L. HOM05D007218 ORTHO05D008812 3.2e-32 142.5 182 42.3
Haze_02814 Corylus avellana HOM05D007218 ORTHO05D008812 4.2e-32 142.1 190 47.4
Lalb_Chr07g0195551 Lupinus albus HOM05D007218 ORTHO05D008812 4.2e-32 142.1 154 50.6
Lj7A544T36 Lonicera japonica HOM05D007218 ORTHO05D008812 7.1e-32 141.4 124 54.0
Carub.0007s2696 Capsella rubella HOM05D007218 ORTHO05D008812 9.3e-32 141.0 122 55.7
Zm00001eb321700 Zea mays HOM05D007218 ORTHO05D008812 9.3e-32 141.0 132 54.5
Peaxi162Scf00001g00604 Petunia axillaris HOM05D007218 ORTHO05D008812 1.6e-31 140.2 125 54.4
Medtr8g006755 Medicago truncatula HOM05D007218 ORTHO05D008812 2.1e-31 139.8 138 53.6
vmacro21048 Vaccinium macrocarpon HOM05D007218 ORTHO05D008812 2.1e-31 139.8 151 48.3
TPR.G33136 Trifolium pratense HOM05D002328 ORTHO05D008812 2.7e-31 139.4 134 52.2
AL5G42610 Arabidopsis lyrata HOM05D007218 ORTHO05D008812 3.5e-31 139.0 122 54.9
Psat4g225320 Pisum sativum HOM05D007218 ORTHO05D008812 3.5e-31 139.0 131 52.7
DCAR_015828 Daucus carota HOM05D007218 ORTHO05D008812 6.0e-31 138.3 137 51.8
ECA240G4247 Erigeron canadensis HOM05D007218 ORTHO05D008812 6.0e-31 138.3 119 56.3
SGA_v2.0_scaffold153G36915 Striga asiatica HOM05D001866 ORTHO05D008812 6.0e-31 138.3 142 48.6
unitig_26.g8871 Utricularia gibba HOM05D007218 ORTHO05D008812 6.0e-31 138.3 140 53.6
Migut.B01549 Erythranthe guttata HOM05D007218 ORTHO05D008812 1.3e-30 137.1 174 42.5
MD02G1216500 Malus domestica HOM05D007218 ORTHO05D008812 1.3e-30 137.1 122 54.9
FvH4_7g09860 Fragaria vesca HOM05D007218 ORTHO05D008812 2.3e-30 136.3 144 49.3
SalBow8G2238 Salvia bowleyana HOM05D007218 ORTHO05D008812 2.3e-30 136.3 170 44.1
AT3G60370 Arabidopsis thaliana HOM05D007218 ORTHO05D008812 3.0e-30 136.0 171 45.0
Lsat_1_v5_gn_3_131281 Lactuca sativa HOM05D007218 ORTHO05D008812 3.0e-30 136.0 177 44.1
RcHm_v2.0_Chr1g0347401 Rosa chinensis HOM05D007218 ORTHO05D008812 3.9e-30 135.6 122 54.1
FAN03G1686 Fragaria x ananassa HOM05D007218 ORTHO05D008812 5.1e-30 135.2 122 54.1
FAN10G1547 Fragaria x ananassa HOM05D002756 ORTHO05D008812 6.7e-30 134.8 122 54.1
FAN10G3136 Fragaria x ananassa HOM05D002756 ORTHO05D008812 6.7e-30 134.8 122 54.1
Prupe.2G127600 Prunus persica HOM05D007218 ORTHO05D008812 8.7e-30 134.4 121 57.0
Sed0023662 Sechium edule HOM05D007218 ORTHO05D008812 1.1e-29 134.0 165 44.2
HanXRQChr13g0423401 Helianthus annuus HOM05D007218 ORTHO05D008812 5.6e-29 131.7 163 44.2
HPP92_012667 Vanilla planifolia HOM05D007218 ORTHO05D008812 9.6e-29 131.0 119 55.5
SEGI_03520 Sequoiadendron giganteum HOM05D007218 ORTHO05D008812 5.3e-27 125.2 116 56.9
Nitab4.5_0000210g0030 Nicotiana tabacum HOM05D007218 ORTHO05D008812 1.2e-26 124.0 105 57.1
FAN06G0867 Fragaria x ananassa HOM05D002756 ORTHO05D008812 7.6e-26 121.3 147 44.9
FAN06G3255 Fragaria x ananassa HOM05D007218 ORTHO05D008812 1.3e-25 120.6 169 41.4
Pp3c13_7390 Physcomitrium patens HOM05D007218 ORTHO05D008812 9.3e-24 114.4 87 59.8
Mapoly0068s0106 Marchantia polymorpha HOM05D007218 ORTHO05D008812 4.6e-23 112.1 96 54.2
Mapoly0156s0027 Marchantia polymorpha HOM05D007218 ORTHO05D008812 4.6e-23 112.1 96 54.2
SMO111G0227 Selaginella moellendorffii HOM05D007218 ORTHO05D008812 2.3e-22 109.8 127 44.9
MCO07G188 Micromonas commoda HOM05D007218 ORTHO05D008812 1.2e-18 97.4 90 48.9
CBR_g48120 Chara braunii HOM05D007218 ORTHO05D008812 3.4e-18 95.9 86 47.7
AagrBONN_evm.TU.Sc2ySwM_228.5704 Anthoceros agrestis HOM05D007218 ORTHO05D008812 5.8e-18 95.1 72 56.9
PRCOL_00005621 Prasinoderma coloniale HOM05D007218 ORTHO05D008812 2.4e-11 73.2 99 40.4
Cre13.g577850 Chlamydomonas reinhardtii HOM05D007218 ORTHO05D008812 6.9e-11 71.6 78 47.4
FAN01G2454 Fragaria x ananassa HOM05D007218 ORTHO05D008812 1.5e-10 70.5 53 58.5
Ah.03g146520 Amaranthus hybridus HOM05D007218 ORTHO05D008812 1.4e-08 63.9 37 73.0
Hma1.2p1_0041F.1_g025310 Hydrangea macrophylla HOM05D007218 ORTHO05D008812 2.5e-08 63.2 122 36.9


User provided reference genes

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