Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G1133 Ceratophyllum demersum HOM05D003846 ORTHO05D004726 3.3e-81 305.1 161 100.0
TAR622G0464 Trochodendron aralioides HOM05D003846 ORTHO05D004726 2.1e-67 259.2 161 79.5
TAR374G1390 Trochodendron aralioides HOM05D003846 ORTHO05D004726 1.3e-66 256.5 161 79.5
Sc04g0006620 Simmondsia chinensis HOM05D003846 ORTHO05D004726 3.9e-66 255.0 161 78.9
Potri.010G128500 Populus trichocarpa HOM05D003846 ORTHO05D004726 4.3e-65 251.5 161 76.4
Gohir.A13G053526 Gossypium hirsutum HOM05D003846 ORTHO05D004726 1.1e-63 246.9 161 75.8
CSS0029565 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 3.1e-63 245.4 162 76.5
Gorai.013G080600 Gossypium raimondii HOM05D003846 ORTHO05D004726 4.0e-63 245.0 161 75.8
Manes.06G071100 Manihot esculenta HOM05D003846 ORTHO05D004726 5.2e-63 244.6 161 77.0
Nn3g17770 Nelumbo nucifera HOM05D003846 ORTHO05D004726 1.2e-62 243.4 162 77.2
TWI79G0122 Tripterygium wilfordii HOM05D003846 ORTHO05D004726 1.5e-62 243.0 161 74.5
Gohir.D13G070400 Gossypium hirsutum HOM05D003846 ORTHO05D004726 2.6e-62 242.3 161 74.5
Duzib251G0345 Durio zibethinus HOM05D003846 ORTHO05D004726 3.4e-62 241.9 161 75.2
Gohir.D13G070700 Gossypium hirsutum HOM05D003846 ORTHO05D004726 3.4e-62 241.9 161 73.9
MBI19_g21095_MAGBIO Magnolia biondii HOM05D003846 ORTHO05D004726 3.4e-62 241.9 160 78.1
Cpa.g.sc1.209 Carica papaya HOM05D003846 ORTHO05D004726 1.3e-61 240.0 161 75.2
Gorai.013G080900 Gossypium raimondii HOM05D003846 ORTHO05D004726 1.7e-61 239.6 161 73.9
Gohir.A13G053470 Gossypium hirsutum HOM05D003846 ORTHO05D004726 2.2e-61 239.2 161 75.2
PSO063G1115 Papaver somniferum HOM05D003846 ORTHO05D004726 2.2e-61 239.2 163 76.1
CiPaw.16G084800 Carya illinoinensis HOM05D003846 ORTHO05D004726 2.9e-61 238.8 161 78.3
Atru.chr11.1333 Acer truncatum HOM05D003846 ORTHO05D004726 4.9e-61 238.0 161 72.7
Dinv07363 Davidia involucrata HOM05D003846 ORTHO05D004726 6.4e-61 237.7 162 73.5
ATR0665G367 Amborella trichopoda HOM05D003846 ORTHO05D004726 1.1e-60 236.9 161 74.5
Dinv21120 Davidia involucrata HOM05D003846 ORTHO05D004726 1.1e-60 236.9 163 75.5
Duzib204G0001 Durio zibethinus HOM05D003846 ORTHO05D004726 1.1e-60 236.9 161 72.7
ClCG05G022950 Citrullus lanatus HOM05D003846 ORTHO05D004726 1.9e-60 236.1 160 73.1
Haze_18631 Corylus avellana HOM05D003846 ORTHO05D004726 1.9e-60 236.1 162 75.3
THA.LOC104821956 Tarenaya hassleriana HOM05D003846 ORTHO05D004726 1.9e-60 236.1 159 73.6
PSO782G3649 Papaver somniferum HOM05D003846 ORTHO05D004726 2.4e-60 235.7 163 76.1
Duzib248G0399 Durio zibethinus HOM05D003846 ORTHO05D004726 3.2e-60 235.3 161 72.7
MD16G1046400 Malus domestica HOM05D003846 ORTHO05D004726 4.2e-60 235.0 161 74.5
CSS0009272 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 7.1e-60 234.2 162 73.5
CANSAT64G1970 Cannabis sativa HOM05D003846 ORTHO05D004726 7.1e-60 234.2 162 72.8
Cfa019801 Carpinus fangiana HOM05D003846 ORTHO05D004726 7.1e-60 234.2 162 74.7
CiPaw.15G127700 Carya illinoinensis HOM05D003846 ORTHO05D004726 7.1e-60 234.2 160 75.6
Lalb_Chr17g0341961 Lupinus albus HOM05D003846 ORTHO05D004726 7.1e-60 234.2 161 73.3
MELO3C012223.2 Cucumis melo HOM05D003846 ORTHO05D004726 9.3e-60 233.8 160 72.5
Nitab4.5_0001599g0080 Nicotiana tabacum HOM05D003846 ORTHO05D004726 1.2e-59 233.4 164 73.2
Prupe.1G306800 Prunus persica HOM05D003846 ORTHO05D004726 1.2e-59 233.4 160 74.4
ClCG04G011240 Citrullus lanatus HOM05D003846 ORTHO05D004726 1.6e-59 233.0 162 74.7
Dinv40424 Davidia involucrata HOM05D003846 ORTHO05D004726 2.1e-59 232.6 162 72.8
TWI31G0653 Tripterygium wilfordii HOM05D003846 ORTHO05D004726 2.1e-59 232.6 161 71.4
Solyc03g119700.3 Solanum lycopersicum HOM05D003846 ORTHO05D004726 3.5e-59 231.9 161 73.9
Sopen03g038530 Solanum pennellii HOM05D003846 ORTHO05D004726 3.5e-59 231.9 161 73.9
PGSC0003DMG400005627 Solanum tuberosum HOM05D003846 ORTHO05D004726 3.5e-59 231.9 161 73.9
MD13G1045100 Malus domestica HOM05D003846 ORTHO05D004726 4.6e-59 231.5 161 73.3
EL10Ac6g14463 Beta vulgaris HOM05D003846 ORTHO05D004726 6.0e-59 231.1 161 70.2
Nitab4.5_0010565g0020 Nicotiana tabacum HOM05D003846 ORTHO05D004726 1.0e-58 230.3 164 72.0
Aqoxy3G00349 Aquilegia oxysepala HOM05D003846 ORTHO05D004726 1.3e-58 229.9 162 72.2
Peaxi162Scf00015g00824 Petunia axillaris HOM05D003846 ORTHO05D004726 1.7e-58 229.6 164 72.0
Sed0019100 Sechium edule HOM05D003846 ORTHO05D004726 2.3e-58 229.2 161 70.8
Lalb_Chr10g0099871 Lupinus albus HOM05D003846 ORTHO05D004726 3.0e-58 228.8 161 71.4
Thhalv10019264m.g Eutrema salsugineum HOM05D003846 ORTHO05D004726 3.9e-58 228.4 161 71.4
Sp5g23760 Schrenkiella parvula HOM05D003846 ORTHO05D004726 5.1e-58 228.0 161 70.2
AUR62002909 Chenopodium quinoa HOM05D003846 ORTHO05D004726 6.6e-58 227.6 161 71.4
Cc04_g07410 Coffea canephora HOM05D003846 ORTHO05D004726 1.1e-57 226.9 161 69.6
MELO3C002078.2 Cucumis melo HOM05D003846 ORTHO05D004726 1.5e-57 226.5 162 72.2
PGR044G0282 Punica granatum HOM05D003846 ORTHO05D004726 1.5e-57 226.5 164 72.0
HPP92_016288 Vanilla planifolia HOM05D003846 ORTHO05D004726 1.9e-57 226.1 161 70.8
Ah.02g127070 Amaranthus hybridus HOM05D003846 ORTHO05D004726 2.5e-57 225.7 163 69.9
Hund25092 Selenicereus undatus HOM05D003846 ORTHO05D004726 2.5e-57 225.7 160 70.0
AL2G27580 Arabidopsis lyrata HOM05D003846 ORTHO05D004726 3.3e-57 225.3 161 69.6
arahy.Tifrunner.gnm1.ann1.72UZVS Arachis hypogaea HOM05D003846 ORTHO05D004726 3.3e-57 225.3 161 70.8
A07p31880 Brassica napus HOM05D003846 ORTHO05D004726 3.3e-57 225.3 163 69.9
HPP92_016307 Vanilla planifolia HOM05D003846 ORTHO05D004726 3.3e-57 225.3 161 70.2
C06p37450 Brassica napus HOM05D003846 ORTHO05D004726 5.6e-57 224.6 163 69.9
BolC6t38848H Brassica oleracea HOM05D003846 ORTHO05D004726 5.6e-57 224.6 163 69.9
BraA07t30817Z Brassica rapa HOM05D003846 ORTHO05D004726 5.6e-57 224.6 163 69.3
CsaV3_1G006510 Cucumis sativus L. HOM05D003846 ORTHO05D004726 5.6e-57 224.6 162 71.6
VMungo1215G1161 Vigna mungo HOM05D003846 ORTHO05D004726 5.6e-57 224.6 161 73.3
Actinidia35079 Actinidia chinensis HOM05D003846 ORTHO05D004726 7.3e-57 224.2 162 68.5
CAN.G438.125 Capsicum annuum HOM05D003846 ORTHO05D004726 9.6e-57 223.8 161 70.2
AT1G68660 Arabidopsis thaliana HOM05D003846 ORTHO05D004726 1.3e-56 223.4 161 69.6
BolC2t08590H Brassica oleracea HOM05D003846 ORTHO05D004726 1.6e-56 223.0 162 69.1
Sed0009794 Sechium edule HOM05D003846 ORTHO05D004726 1.6e-56 223.0 160 68.1
Actinidia31024 Actinidia chinensis HOM05D003846 ORTHO05D004726 2.1e-56 222.6 162 67.9
A02p15260 Brassica napus HOM05D003846 ORTHO05D004726 2.1e-56 222.6 162 69.1
BraA02t06588Z Brassica rapa HOM05D003846 ORTHO05D004726 2.1e-56 222.6 162 69.1
DCAR_023191 Daucus carota HOM05D003846 ORTHO05D004726 2.8e-56 222.2 161 68.9
CARHR061470 Cardamine hirsuta HOM05D003846 ORTHO05D004726 3.6e-56 221.9 161 68.9
Phvul.003G028500 Phaseolus vulgaris HOM05D003846 ORTHO05D004726 3.6e-56 221.9 161 71.4
arahy.Tifrunner.gnm1.ann1.6C9V7B Arachis hypogaea HOM05D003846 ORTHO05D004726 4.8e-56 221.5 161 70.8
BcaB05g24403 Brassica carinata HOM05D003846 ORTHO05D004726 6.2e-56 221.1 162 69.8
Carub.0002s1520 Capsella rubella HOM05D003846 ORTHO05D004726 6.2e-56 221.1 161 67.7
Ah.03g137840 Amaranthus hybridus HOM05D003846 ORTHO05D004726 8.1e-56 220.7 161 68.3
Glyma.02G098100 Glycine max HOM05D003846 ORTHO05D004726 8.1e-56 220.7 161 71.4
QL10p023733 Quercus lobata HOM05D003846 ORTHO05D004726 8.1e-56 220.7 184 65.8
RcHm_v2.0_Chr4g0435651 Rosa chinensis HOM05D003846 ORTHO05D004726 8.1e-56 220.7 160 70.0
Glyma.01G084700 Glycine max HOM05D003846 ORTHO05D004726 1.1e-55 220.3 161 70.8
Sed0022338 Sechium edule HOM05D003846 ORTHO05D004726 1.1e-55 220.3 162 68.5
BcaB03g15438 Brassica carinata HOM05D003846 ORTHO05D004726 2.4e-55 219.2 164 68.9
Ciclev10032968m.g Citrus clementina HOM05D003846 ORTHO05D004726 2.4e-55 219.2 161 68.9
Prupe.5G218600 Prunus persica HOM05D003846 ORTHO05D004726 3.1e-55 218.8 159 69.8
Eucgr.K02665 Eucalyptus grandis HOM05D003846 ORTHO05D004726 9.0e-55 217.2 162 70.4
unitig_21.g20429 Utricularia gibba HOM05D003846 ORTHO05D004726 9.0e-55 217.2 168 67.9
GSVIVG01008253001 Vitis vinifera HOM05D003846 ORTHO05D004726 1.2e-54 216.9 161 68.9
Lj2g0005403 Lotus japonicus HOM05D003846 ORTHO05D004726 1.5e-54 216.5 161 67.1
RcHm_v2.0_Chr7g0184811 Rosa chinensis HOM05D003846 ORTHO05D004726 2.0e-54 216.1 159 66.7
arahy.Tifrunner.gnm1.ann1.5K2M2S Arachis hypogaea HOM05D003846 ORTHO05D004726 2.6e-54 215.7 162 67.3
arahy.Tifrunner.gnm1.ann1.5U1FHR Arachis hypogaea HOM05D003846 ORTHO05D004726 2.6e-54 215.7 162 67.3
Glyma.07G089500 Glycine max HOM05D003846 ORTHO05D004726 3.4e-54 215.3 160 68.8
Glyma.09G187300 Glycine max HOM05D003846 ORTHO05D004726 3.4e-54 215.3 160 68.8
MSTRG.9269 Avicennia marina HOM05D003846 ORTHO05D004726 4.5e-54 214.9 164 69.5
HanXRQChr06g0171111 Helianthus annuus HOM05D003846 ORTHO05D004726 7.6e-54 214.2 162 67.9
Medtr6g085050 Medicago truncatula HOM05D003846 ORTHO05D004726 7.6e-54 214.2 153 73.2
MD14G1223300 Malus domestica HOM05D003846 ORTHO05D004726 1.3e-53 213.4 158 65.8
Medtr5g054770 Medicago truncatula HOM05D003846 ORTHO05D004726 1.3e-53 213.4 161 68.3
ECA246G4193 Erigeron canadensis HOM05D003846 ORTHO05D004726 3.8e-53 211.8 162 68.5
FvH4_5g12540 Fragaria vesca HOM05D003846 ORTHO05D004726 3.8e-53 211.8 160 65.6
FAN04G0089 Fragaria x ananassa HOM05D003846 ORTHO05D004726 3.8e-53 211.8 160 65.6
FAN13G1296 Fragaria x ananassa HOM05D003846 ORTHO05D004726 3.8e-53 211.8 160 65.6
FAN18G2095 Fragaria x ananassa HOM05D003846 ORTHO05D004726 3.8e-53 211.8 160 65.6
FAN18G2723 Fragaria x ananassa HOM05D003846 ORTHO05D004726 3.8e-53 211.8 160 65.6
Lj2g0006290 Lotus japonicus HOM05D003846 ORTHO05D004726 3.8e-53 211.8 162 66.7
FAN08G1200 Fragaria x ananassa HOM05D003846 ORTHO05D004726 4.9e-53 211.5 160 65.0
Potri.008G117800 Populus trichocarpa HOM05D003846 ORTHO05D004726 6.4e-53 211.1 110 93.6
Lsat_1_v5_gn_3_40660 Lactuca sativa HOM05D003846 ORTHO05D004726 8.4e-53 210.7 162 67.9
Psat2g088560 Pisum sativum HOM05D003846 ORTHO05D004726 8.4e-53 210.7 140 75.7
Phvul.004G160300 Phaseolus vulgaris HOM05D003846 ORTHO05D004726 1.1e-52 210.3 160 68.1
Manes.14G098800 Manihot esculenta HOM05D003846 ORTHO05D004726 1.4e-52 209.9 110 91.8
SEGI_01063 Sequoiadendron giganteum HOM05D003846 ORTHO05D004726 1.4e-52 209.9 161 64.6
Lalb_Chr14g0371301 Lupinus albus HOM05D003846 ORTHO05D004726 1.9e-52 209.5 162 65.4
Oeu024319.1 Olea europaea HOM05D003846 ORTHO05D004726 1.9e-52 209.5 110 92.7
unitig_744.g24407 Utricularia gibba HOM05D003846 ORTHO05D004726 2.4e-52 209.1 170 65.9
CSS0028088 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 4.2e-52 208.4 110 91.8
Psat1g039320 Pisum sativum HOM05D003846 ORTHO05D004726 4.2e-52 208.4 153 70.6
VMungo0464G1055 Vigna mungo HOM05D003846 ORTHO05D004726 9.3e-52 207.2 160 66.2
Sabra10G0097700 Salix brachista HOM05D003846 ORTHO05D004726 1.6e-51 206.5 110 90.0
SalBow1G4777 Salvia bowleyana HOM05D003846 ORTHO05D004726 1.6e-51 206.5 140 76.4
TPR.G38292 Trifolium pratense HOM05D003846 ORTHO05D004726 1.6e-51 206.5 140 74.3
BcaB03g15443 Brassica carinata HOM05D003846 ORTHO05D004726 2.7e-51 205.7 142 73.2
Thecc.02G359500 Theobroma cacao HOM05D003846 ORTHO05D004726 3.5e-51 205.3 109 90.8
TPR.G9001 Trifolium pratense HOM05D003846 ORTHO05D004726 4.6e-51 204.9 149 72.5
BcaC03g14976 Brassica carinata HOM05D003846 ORTHO05D004726 1.8e-50 203.0 141 73.0
COL.COLO4_07882 Corchorus olitorius HOM05D000199 ORTHO05D000550 1.8e-50 203.0 128 79.7
AagrBONN_evm.TU.Sc2ySwM_369.545 Anthoceros agrestis HOM05D003846 ORTHO05D004726 6.7e-50 201.1 110 87.3
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 1.9e-49 199.5 110 86.4
C02p25100 Brassica napus HOM05D003846 ORTHO05D004726 2.5e-49 199.1 128 76.6
AUR62035268 Chenopodium quinoa HOM05D003846 ORTHO05D004726 3.3e-49 198.7 136 73.5
Os08g0432500 Oryza sativa ssp. japonica HOM05D003846 ORTHO05D004726 7.4e-49 197.6 165 62.4
Zm00001eb041630 Zea mays HOM05D003846 ORTHO05D004726 7.4e-49 197.6 164 62.8
vmacro16453 Vaccinium macrocarpon HOM05D003846 ORTHO05D004726 1.3e-48 196.8 218 51.8
Actinidia39818 Actinidia chinensis HOM05D003846 ORTHO05D004726 8.1e-48 194.1 108 84.3
BcaC08g45948 Brassica carinata HOM05D003846 ORTHO05D004726 1.8e-47 193.0 146 67.8
Migut.D01214 Erythranthe guttata HOM05D003846 ORTHO05D004726 4.0e-47 191.8 112 84.8
Mapoly0068s0048 Marchantia polymorpha HOM05D003846 ORTHO05D004726 5.3e-47 191.4 110 82.7
Lj9A429T51 Lonicera japonica HOM05D003846 ORTHO05D004726 1.2e-46 190.3 148 70.3
SGA_v2.0_scaffold63G21786 Striga asiatica HOM05D003846 ORTHO05D004726 5.8e-46 188.0 108 83.3
Zm00001eb179570 Zea mays HOM05D003846 ORTHO05D004726 1.3e-45 186.8 166 59.0
Rhsim12G0144000 Rhododendron simsii HOM05D003846 ORTHO05D004726 2.9e-45 185.7 110 81.8
SMO356G0199 Selaginella moellendorffii HOM05D003846 ORTHO05D004726 1.4e-44 183.3 109 81.7
Pp3c10_21560 Physcomitrium patens HOM05D003846 ORTHO05D004726 4.6e-43 178.3 106 77.4
Pp3c20_21920 Physcomitrium patens HOM05D003846 ORTHO05D004726 2.5e-41 172.6 104 74.0
Lj6A764T53 Lonicera japonica HOM05D003846 ORTHO05D004726 1.6e-40 169.9 136 64.7
GSVIVG01011936001 Vitis vinifera HOM05D003846 ORTHO05D004726 6.2e-40 167.9 161 57.1
Sed0007398 Sechium edule HOM05D003846 ORTHO05D004726 3.1e-39 165.6 89 87.6
CDE05G0888 Ceratophyllum demersum HOM05D003846 ORTHO05D004726 8.4e-37 157.5 143 61.5
DCAR_011545 Daucus carota HOM05D003846 ORTHO05D004726 3.2e-36 155.6 82 87.8
CBR_g40856 Chara braunii HOM05D003846 ORTHO05D004726 7.9e-35 151.0 108 69.4
HPP92_027194 Vanilla planifolia HOM05D003846 ORTHO05D004726 5.3e-31 138.3 145 50.3
PRCOL_00003868 Prasinoderma coloniale HOM05D003846 ORTHO05D004726 2.7e-27 125.9 109 57.8
Manes.11G040441 Manihot esculenta HOM05D000085 ORTHO05D249439 1.1e-25 120.6 95 60.0
Lsat_1_v5_gn_4_145001 Lactuca sativa HOM05D003846 ORTHO05D004726 3.7e-24 115.5 66 83.3
Manes.11G039928 Manihot esculenta HOM05D000085 ORTHO05D250131 1.4e-23 113.6 86 62.8
Manes.11G040408 Manihot esculenta HOM05D003846 ORTHO05D004726 2.4e-23 112.8 88 61.4
Cre17.g696400 Chlamydomonas reinhardtii HOM05D003846 ORTHO05D004726 5.9e-22 108.2 110 54.5
Lsat_1_v5_gn_8_50200 Lactuca sativa HOM05D003846 ORTHO05D004726 1.7e-21 106.7 66 80.3
TPR.G20310 Trifolium pratense HOM05D003846 ORTHO05D004726 1.6e-19 100.1 54 87.0
Lsat_1_v5_gn_4_123441 Lactuca sativa HOM05D003846 ORTHO05D004726 2.7e-19 99.4 53 86.8
Lsat_1_v5_gn_5_125381 Lactuca sativa HOM05D003846 ORTHO05D020826 2.7e-19 99.4 53 86.8
Lsat_1_v5_gn_5_18841 Lactuca sativa HOM05D003846 ORTHO05D020826 2.7e-19 99.4 53 86.8
Lsat_1_v5_gn_5_43841 Lactuca sativa HOM05D003846 ORTHO05D020826 2.7e-19 99.4 53 86.8
Lsat_1_v5_gn_7_114520 Lactuca sativa HOM05D003846 ORTHO05D004726 4.7e-19 98.6 88 59.1
Lsat_1_v5_gn_4_70420 Lactuca sativa HOM05D003297 ORTHO05D020826 3.9e-18 95.5 65 73.8
Lj6A762T41 Lonicera japonica HOM05D003846 ORTHO05D004726 1.1e-15 87.4 55 74.5
Nn4g23759 Nelumbo nucifera HOM05D003846 ORTHO05D004726 1.1e-15 87.4 74 59.5
CsaV3_5G034070 Cucumis sativus L. HOM05D000040 ORTHO05D000759 1.0e-13 80.9 80 53.8
Aa31sc562G10 Aethionema arabicum HOM05D003846 ORTHO05D004726 2.2e-13 79.7 48 72.9
FAN12G0550 Fragaria x ananassa HOM05D003846 ORTHO05D004726 1.1e-09 67.4 63 63.5
C06p41190 Brassica napus HOM05D003846 ORTHO05D004726 1.8e-07 60.1 40 70.0
Aa31LG6G7310 Aethionema arabicum HOM05D003846 ORTHO05D058653 2.6e-06 56.2 32 78.1


User provided reference genes

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