Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G1120 Ceratophyllum demersum HOM05D004688 ORTHO05D005490 1.7e-241 839.0 423 100.0
CDE02G1754 Ceratophyllum demersum HOM05D004688 ORTHO05D005490 4.7e-180 634.8 348 93.1
MBI04_g30768_MAGBIO Magnolia biondii HOM05D004688 ORTHO05D005490 1.6e-114 417.2 350 60.6
TAR629G2324 Trochodendron aralioides HOM05D004688 ORTHO05D005490 3.3e-109 399.4 352 59.1
Aqoxy1G03166 Aquilegia oxysepala HOM05D004688 ORTHO05D005490 3.7e-108 396.0 331 61.9
TAR636G2823 Trochodendron aralioides HOM05D004688 ORTHO05D005490 4.1e-107 392.5 352 58.2
Hma1.2p1_0528F.1_g173050 Hydrangea macrophylla HOM05D004688 ORTHO05D005490 1.2e-103 380.9 348 56.6
Cfa016079 Carpinus fangiana HOM05D004688 ORTHO05D005490 6.1e-103 378.6 349 56.7
RhsimUnG0132900 Rhododendron simsii HOM05D004688 ORTHO05D005490 1.0e-102 377.9 353 56.9
PSO063G1904 Papaver somniferum HOM05D004688 ORTHO05D005490 3.0e-102 376.3 349 57.6
CiPaw.05G212300 Carya illinoinensis HOM05D004688 ORTHO05D005490 6.8e-102 375.2 348 57.5
COL.COLO4_15125 Corchorus olitorius HOM05D004688 ORTHO05D005490 1.2e-101 374.4 343 58.0
PSO782G0681 Papaver somniferum HOM05D004688 ORTHO05D005490 2.6e-101 373.2 349 57.3
vmacro12865 Vaccinium macrocarpon HOM05D004688 ORTHO05D005490 5.7e-101 372.1 352 56.8
Nn3g21937 Nelumbo nucifera HOM05D004688 ORTHO05D005490 4.8e-100 369.0 355 58.0
Haze_00366 Corylus avellana HOM05D004688 ORTHO05D005490 6.3e-100 368.6 349 55.9
Potri.019G042700 Populus trichocarpa HOM05D004688 ORTHO05D005490 6.3e-100 368.6 349 57.0
Thecc.05G223200 Theobroma cacao HOM05D004688 ORTHO05D005490 6.3e-100 368.6 342 56.7
Atru.chr12.1856 Acer truncatum HOM05D004688 ORTHO05D005490 8.3e-100 368.2 356 55.6
Manes.08G160300 Manihot esculenta HOM05D004688 ORTHO05D005490 8.3e-100 368.2 349 56.2
QL09p020531 Quercus lobata HOM05D004688 ORTHO05D005490 3.1e-99 366.3 353 54.7
Nn4g25357 Nelumbo nucifera HOM05D004688 ORTHO05D005490 5.4e-99 365.5 351 57.3
Actinidia20087 Actinidia chinensis HOM05D004688 ORTHO05D005490 1.6e-98 364.0 349 56.7
Dinv24334 Davidia involucrata HOM05D004688 ORTHO05D005490 2.0e-98 363.6 352 56.8
Gohir.D03G055600 Gossypium hirsutum HOM05D004688 ORTHO05D005490 4.5e-98 362.5 355 56.6
Ciclev10032005m.g Citrus clementina HOM05D004688 ORTHO05D005490 7.7e-98 361.7 340 55.9
Gorai.003G058400 Gossypium raimondii HOM05D004688 ORTHO05D005490 1.0e-97 361.3 355 56.3
Duzib128G0049 Durio zibethinus HOM05D004688 ORTHO05D005490 2.3e-97 360.1 354 55.9
Gohir.A02G114600 Gossypium hirsutum HOM05D004688 ORTHO05D005490 2.9e-97 359.8 355 56.3
Potri.013G076900 Populus trichocarpa HOM05D004688 ORTHO05D005490 3.8e-97 359.4 349 56.4
FAN01G2619 Fragaria x ananassa HOM05D004688 ORTHO05D005490 6.6e-97 358.6 351 55.8
Gohir.A13G158100 Gossypium hirsutum HOM05D004688 ORTHO05D005490 1.9e-96 357.1 339 56.9
FAN03G0573 Fragaria x ananassa HOM05D004688 ORTHO05D005490 4.2e-96 355.9 351 55.8
FvH4_7g34310 Fragaria vesca HOM05D004688 ORTHO05D005490 5.5e-96 355.5 351 55.6
Nn1g09153 Nelumbo nucifera HOM05D004688 ORTHO05D005490 9.5e-96 354.8 357 57.4
SalBow1G7515 Salvia bowleyana HOM05D004688 ORTHO05D005490 9.5e-96 354.8 352 54.0
GSVIVG01024321001 Vitis vinifera HOM05D004688 ORTHO05D005490 2.1e-95 353.6 350 56.0
Duzib177G0832 Durio zibethinus HOM05D004688 ORTHO05D005490 3.6e-95 352.8 349 57.3
Gohir.D13G162400 Gossypium hirsutum HOM05D004688 ORTHO05D005490 4.7e-95 352.4 339 56.3
Gorai.013G184500 Gossypium raimondii HOM05D004688 ORTHO05D005490 6.1e-95 352.1 343 55.7
RcHm_v2.0_Chr1g0384701 Rosa chinensis HOM05D004688 ORTHO05D005490 6.1e-95 352.1 350 55.4
Manes.09G130000 Manihot esculenta HOM05D004688 ORTHO05D005490 1.2e-93 347.8 349 53.0
CiPaw.06G036300 Carya illinoinensis HOM05D004688 ORTHO05D005490 5.7e-93 345.5 351 56.4
TWI18G0476 Tripterygium wilfordii HOM05D004688 ORTHO05D005490 5.7e-93 345.5 342 54.4
Zm00001eb245400 Zea mays HOM05D004688 ORTHO05D005490 7.5e-93 345.1 351 52.4
Gohir.A08G221644 Gossypium hirsutum HOM05D004688 ORTHO05D005490 1.3e-92 344.4 342 55.8
ClCG09G013160 Citrullus lanatus HOM05D004688 ORTHO05D005490 1.7e-92 344.0 350 54.3
TWI12G0369 Tripterygium wilfordii HOM05D004688 ORTHO05D005490 3.7e-92 342.8 342 53.5
Gohir.D08G240400 Gossypium hirsutum HOM05D004688 ORTHO05D005490 1.4e-91 340.9 342 55.6
Eucgr.E02431 Eucalyptus grandis HOM05D004688 ORTHO05D005490 4.1e-91 339.3 338 54.1
Sed0002645 Sechium edule HOM05D004688 ORTHO05D005490 5.4e-91 339.0 353 53.0
Cc04_g10300 Coffea canephora HOM05D004688 ORTHO05D005490 9.2e-91 338.2 348 52.0
Prupe.2G329400 Prunus persica HOM05D004688 ORTHO05D005490 2.0e-90 337.0 351 55.0
CANSAT21G2449 Cannabis sativa HOM05D004688 ORTHO05D005490 2.7e-90 336.7 342 55.6
Gorai.004G255700 Gossypium raimondii HOM05D004688 ORTHO05D005490 3.5e-90 336.3 342 55.0
Oeu047689.1 Olea europaea HOM05D004688 ORTHO05D005490 1.0e-89 334.7 348 53.2
Sed0013330 Sechium edule HOM05D004688 ORTHO05D005490 1.0e-89 334.7 345 53.6
MELO3C014341.2 Cucumis melo HOM05D004688 ORTHO05D005490 2.3e-89 333.6 339 53.1
Os02g0582200 Oryza sativa ssp. japonica HOM05D004688 ORTHO05D005490 2.3e-89 333.6 352 52.3
DCAR_030965 Daucus carota HOM05D004688 ORTHO05D005490 2.9e-89 333.2 347 53.0
Sabra19G0053300 Salix brachista HOM05D004688 ORTHO05D005490 5.0e-89 332.4 417 48.0
CsaV3_6G036850 Cucumis sativus L. HOM05D004688 ORTHO05D005490 8.6e-89 331.6 340 52.9
Zm00001eb183340 Zea mays HOM05D004688 ORTHO05D005490 1.5e-88 330.9 351 50.4
Sabra13G0065900 Salix brachista HOM05D004688 ORTHO05D005490 7.3e-88 328.6 412 47.3
Migut.E01543 Erythranthe guttata HOM05D004688 ORTHO05D005490 9.5e-88 328.2 350 52.3
arahy.Tifrunner.gnm1.ann1.8TRX11 Arachis hypogaea HOM05D004688 ORTHO05D005490 1.2e-87 327.8 348 52.9
MSTRG.1666 Avicennia marina HOM05D004688 ORTHO05D005490 1.6e-87 327.4 348 52.3
Oeu037809.1 Olea europaea HOM05D004688 ORTHO05D005490 1.6e-87 327.4 348 51.7
arahy.Tifrunner.gnm1.ann1.N6YK28 Arachis hypogaea HOM05D004688 ORTHO05D005490 2.8e-87 326.6 348 52.9
ECA236G0885 Erigeron canadensis HOM05D004688 ORTHO05D005490 8.0e-87 325.1 337 51.9
Lj2A605T63 Lonicera japonica HOM05D004688 ORTHO05D005490 1.0e-86 324.7 400 46.5
Ca_19600_v3 Cicer arietinum L. HOM05D004688 ORTHO05D005490 2.0e-85 320.5 349 52.1
CSS0020442 Camellia sinensis var. sinensis HOM05D004688 ORTHO05D005490 2.6e-85 320.1 360 53.3
MSTRG.14034 Avicennia marina HOM05D004688 ORTHO05D005490 4.4e-85 319.3 339 51.9
THA.LOC104823796 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 5.8e-85 318.9 356 53.9
Dinv03730 Davidia involucrata HOM05D004688 ORTHO05D005490 2.2e-84 317.0 300 57.3
Oeu044132.1 Olea europaea HOM05D004688 ORTHO05D005490 2.2e-84 317.0 337 53.1
Peaxi162Scf00012g01425 Petunia axillaris HOM05D004688 ORTHO05D005490 2.2e-84 317.0 348 51.4
MD07G1032800 Malus domestica HOM05D004688 ORTHO05D005490 3.7e-84 316.2 351 52.7
HanXRQChr04g0116531 Helianthus annuus HOM05D004688 ORTHO05D005490 4.9e-84 315.8 348 51.4
Sc07g0001340 Simmondsia chinensis HOM05D004688 ORTHO05D005490 4.9e-84 315.8 347 51.9
TPR.G9830 Trifolium pratense HOM05D004688 ORTHO05D005490 5.4e-83 312.4 355 50.4
Lj3g0005411 Lotus japonicus HOM05D004688 ORTHO05D005490 7.0e-83 312.0 349 51.3
Medtr0004s0230 Medicago truncatula HOM05D004688 ORTHO05D005490 2.0e-82 310.5 357 50.7
SGA_v2.0_scaffold163G38052 Striga asiatica HOM05D004688 ORTHO05D005490 2.7e-82 310.1 342 50.3
Carub.0007s1323 Capsella rubella HOM05D004688 ORTHO05D005490 1.0e-81 308.1 339 53.1
FAN10G2489 Fragaria x ananassa HOM05D004688 ORTHO05D005490 1.7e-81 307.4 396 48.2
Carub.0007s1324 Capsella rubella HOM05D004688 ORTHO05D005490 3.0e-81 306.6 352 52.0
PGSC0003DMG400028677 Solanum tuberosum HOM05D004688 ORTHO05D005490 3.9e-81 306.2 349 49.3
Glyma.09G222900 Glycine max HOM05D004688 ORTHO05D005490 5.0e-81 305.8 351 49.9
Glyma.12G014100 Glycine max HOM05D004688 ORTHO05D005490 8.6e-81 305.1 351 50.4
Solyc11g005810.2 Solanum lycopersicum HOM05D004688 ORTHO05D005490 8.6e-81 305.1 349 49.3
THA.LOC104805719 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 8.6e-81 305.1 339 50.4
Thhalv10025690m.g Eutrema salsugineum HOM05D004688 ORTHO05D005490 1.5e-80 304.3 340 53.2
Sopen11g001770 Solanum pennellii HOM05D004688 ORTHO05D005490 1.5e-80 304.3 349 49.3
Psat0s643g0040 Pisum sativum HOM05D004688 ORTHO05D005490 2.5e-80 303.5 351 50.1
VMungo1127G1418 Vigna mungo HOM05D004688 ORTHO05D005490 2.5e-80 303.5 353 49.9
Sp7g25560 Schrenkiella parvula HOM05D004688 ORTHO05D005490 3.3e-80 303.1 347 51.3
Aa31LG5G12060 Aethionema arabicum HOM05D004688 ORTHO05D003121 5.6e-80 302.4 338 52.7
AT4G27620 Arabidopsis thaliana HOM05D004688 ORTHO05D005490 7.3e-80 302.0 340 51.2
Lalb_Chr19g0140091 Lupinus albus HOM05D004688 ORTHO05D005490 2.8e-79 300.1 335 49.9
AUR62002842 Chenopodium quinoa HOM05D004688 ORTHO05D005490 4.7e-79 299.3 362 48.6
MD01G1239500 Malus domestica HOM05D004688 ORTHO05D005490 4.7e-79 299.3 351 51.0
Sp7g25570 Schrenkiella parvula HOM05D004688 ORTHO05D005490 1.4e-78 297.7 340 51.8
CARHR235320 Cardamine hirsuta HOM05D004688 ORTHO05D005490 2.3e-78 297.0 340 51.2
Thhalv10025651m.g Eutrema salsugineum HOM05D004688 ORTHO05D005490 3.1e-78 296.6 347 50.1
PGR142G2085 Punica granatum HOM05D004688 ORTHO05D005490 5.2e-78 295.8 341 52.2
Lalb_Chr01g0000741 Lupinus albus HOM05D004688 ORTHO05D005490 6.8e-78 295.4 353 49.6
CARHR235310 Cardamine hirsuta HOM05D004688 ORTHO05D005490 1.3e-76 291.2 341 51.6
AL7G25110 Arabidopsis lyrata HOM05D004688 ORTHO05D005490 8.3e-76 288.5 345 50.7
EL10Ac6g14347 Beta vulgaris HOM05D004688 ORTHO05D005490 8.3e-76 288.5 338 51.2
BcaNung01654 Brassica carinata HOM05D004688 ORTHO05D005490 1.4e-75 287.7 347 48.7
THA.LOC104821693 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 4.1e-75 286.2 344 50.3
HanXRQChr15g0482031 Helianthus annuus HOM05D004688 ORTHO05D005490 2.1e-74 283.9 335 49.6
Nitab4.5_0000877g0060 Nicotiana tabacum HOM05D004688 ORTHO05D005490 7.8e-74 282.0 351 48.7
AUR62037307 Chenopodium quinoa HOM05D004688 ORTHO05D005490 3.0e-73 280.0 354 47.7
BcaC09g50567 Brassica carinata HOM05D004688 ORTHO05D005490 3.9e-73 279.6 350 49.1
BolC1t02331H Brassica oleracea HOM05D004688 ORTHO05D005490 3.9e-73 279.6 350 49.1
Duzib106G1350 Durio zibethinus HOM05D004688 ORTHO05D005490 8.6e-73 278.5 274 53.6
Lalb_Chr03g0024311 Lupinus albus HOM05D004688 ORTHO05D005490 1.1e-72 278.1 328 51.2
AT4G27610 Arabidopsis thaliana HOM05D004688 ORTHO05D005490 3.3e-72 276.6 342 49.4
ATR0829G074 Amborella trichopoda HOM05D004688 ORTHO05D005490 1.6e-71 274.2 350 49.4
BcaC06g32678 Brassica carinata HOM05D004688 ORTHO05D005490 4.7e-71 272.7 346 48.0
BcaNung01652 Brassica carinata HOM05D004688 ORTHO05D005490 4.7e-71 272.7 339 49.6
A01p18910 Brassica napus HOM05D004688 ORTHO05D005490 4.7e-71 272.7 340 49.4
BraA01t01832Z Brassica rapa HOM05D004688 ORTHO05D005490 8.1e-71 271.9 340 49.4
A01p18850 Brassica napus HOM05D004688 ORTHO05D005490 1.1e-70 271.6 347 47.8
BraA01t01828Z Brassica rapa HOM05D004688 ORTHO05D005490 1.8e-70 270.8 347 47.8
BcaC09g50575 Brassica carinata HOM05D004688 ORTHO05D005490 5.2e-70 269.2 348 48.3
BolC1t02329H Brassica oleracea HOM05D004688 ORTHO05D005490 8.9e-70 268.5 348 48.6
BolC7t46040H Brassica oleracea HOM05D004688 ORTHO05D005490 8.9e-70 268.5 332 49.1
C07p55600 Brassica napus HOM05D004688 ORTHO05D005490 1.5e-69 267.7 329 48.9
A03p57380 Brassica napus HOM05D004688 ORTHO05D005490 2.6e-69 266.9 330 48.2
BraA03t14804Z Brassica rapa HOM05D004688 ORTHO05D005490 2.6e-69 266.9 330 48.2
C01p23780 Brassica napus HOM05D004688 ORTHO05D005490 9.9e-69 265.0 347 48.4
C01p23860 Brassica napus HOM05D004688 ORTHO05D005490 9.9e-69 265.0 340 48.8
Phvul.011G017000 Phaseolus vulgaris HOM05D004688 ORTHO05D005490 1.7e-68 264.2 275 55.3
CSS0035319 Camellia sinensis var. sinensis HOM05D004688 ORTHO05D005490 2.9e-68 263.5 258 56.2
Ah.02g127670 Amaranthus hybridus HOM05D004688 ORTHO05D005490 4.9e-68 262.7 342 47.4
Lsat_1_v5_gn_7_27441 Lactuca sativa HOM05D005861 ORTHO05D007151 8.3e-68 261.9 286 53.1
Ah.03g138260 Amaranthus hybridus HOM05D004688 ORTHO05D005490 1.9e-67 260.8 351 46.2
Actinidia06638 Actinidia chinensis HOM05D004688 ORTHO05D005490 1.3e-65 254.6 250 56.4
AL7G25100 Arabidopsis lyrata HOM05D004688 ORTHO05D005490 3.6e-55 219.9 211 58.3
unitig_578.g16583 Utricularia gibba HOM05D004688 ORTHO05D005490 1.4e-54 218.0 256 48.8
Migut.A00176 Erythranthe guttata HOM05D004688 ORTHO05D005490 1.9e-51 207.6 348 42.0
SEGI_37617 Sequoiadendron giganteum HOM05D004688 ORTHO05D005490 7.9e-42 175.6 395 33.9
Nitab4.5_0000805g0040 Nicotiana tabacum HOM05D004688 ORTHO05D005490 1.3e-39 168.3 349 34.1
BcaC06g32679 Brassica carinata HOM05D006163 ORTHO05D007625 7.6e-37 159.1 327 35.8
HPP92_022761 Vanilla planifolia HOM05D004688 ORTHO05D005490 2.1e-34 151.0 255 39.6
HPP92_004939 Vanilla planifolia HOM05D004688 ORTHO05D005490 2.5e-27 127.5 179 41.3
HPP92_004940 Vanilla planifolia HOM05D004688 ORTHO05D005490 4.6e-26 123.2 157 47.1
unitig_8.g5064 Utricularia gibba HOM05D004688 ORTHO05D005490 4.6e-18 96.7 157 40.8
SGA_v2.0_scaffold249G44960 Striga asiatica HOM05D004688 ORTHO05D005490 2.6e-13 80.9 106 45.3
unitig_8.g5063 Utricularia gibba HOM05D004688 ORTHO05D005490 2.1e-10 71.2 144 34.0
Mapoly0010s0074 Marchantia polymorpha HOM05D017133 ORTHO05D005490 3.6e-10 70.5 392 23.7
Oeu004249.1 Olea europaea HOM05D004688 ORTHO05D005490 1.4e-09 68.6 232 26.3
Pp3c7_3600 Physcomitrium patens HOM05D017133 ORTHO05D019609 6.7e-09 66.2 246 24.8
SMO367G0918 Selaginella moellendorffii HOM05D004688 ORTHO05D005490 4.4e-08 63.5 205 25.9
Pp3c24_15840 Physcomitrium patens HOM05D017133 ORTHO05D005490 2.4e-06 57.8 364 23.1
Peaxi162Scf00120g01119 Petunia axillaris HOM05D002883 ORTHO05D003116 7.0e-06 56.2 42 71.4


User provided reference genes

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