Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G1116 Ceratophyllum demersum HOM05D003119 ORTHO05D003559 4.6e-205 717.6 348 100.0
TAR633G1226 Trochodendron aralioides HOM05D003119 ORTHO05D003559 1.1e-118 430.6 305 66.9
Nn7g36274 Nelumbo nucifera HOM05D003119 ORTHO05D003559 2.0e-115 419.9 302 65.2
COL.COLO4_04878 Corchorus olitorius HOM05D003119 ORTHO05D003559 7.5e-115 417.9 305 64.9
Thecc.01G407300 Theobroma cacao HOM05D003119 ORTHO05D003559 9.8e-115 417.5 305 65.2
Cpa.g.sc125.32 Carica papaya HOM05D003119 ORTHO05D003559 1.7e-114 416.8 302 64.2
Gorai.004G170700 Gossypium raimondii HOM05D003119 ORTHO05D003559 1.7e-114 416.8 305 65.6
Manes.10G139100 Manihot esculenta HOM05D003119 ORTHO05D003559 1.7e-114 416.8 306 65.7
Gohir.D08G163800 Gossypium hirsutum HOM05D003119 ORTHO05D003559 2.2e-114 416.4 305 65.6
PSO063G0387 Papaver somniferum HOM05D003119 ORTHO05D003559 2.8e-114 416.0 304 64.8
Gohir.A08G142900 Gossypium hirsutum HOM05D003119 ORTHO05D003559 4.1e-113 412.1 304 64.8
GSVIVG01032165001 Vitis vinifera HOM05D003119 ORTHO05D003559 5.4e-113 411.8 306 63.7
Duzib133G0610 Durio zibethinus HOM05D003119 ORTHO05D003559 9.2e-113 411.0 303 64.0
Prupe.2G020300 Prunus persica HOM05D003119 ORTHO05D003559 1.2e-112 410.6 305 63.3
vmacro13692 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 1.6e-112 410.2 304 62.2
MD07G1018500 Malus domestica HOM05D003119 ORTHO05D003559 2.3e-111 406.4 303 63.0
Nitab4.5_0000707g0170 Nicotiana tabacum HOM05D003119 ORTHO05D003559 2.9e-111 406.0 314 62.1
Nitab4.5_0008441g0010 Nicotiana tabacum HOM05D003119 ORTHO05D003559 2.9e-111 406.0 316 61.1
RcHm_v2.0_Chr1g0317311 Rosa chinensis HOM05D003119 ORTHO05D003559 2.9e-111 406.0 303 64.4
CANSAT80G1880 Cannabis sativa HOM05D003119 ORTHO05D003559 6.6e-111 404.8 307 62.2
Peaxi162Scf00694g00124 Petunia axillaris HOM05D003119 ORTHO05D003559 5.6e-110 401.7 314 61.5
FAN06G3340 Fragaria x ananassa HOM05D003119 ORTHO05D003559 9.5e-110 401.0 303 63.7
HanXRQChr16g0524981 Helianthus annuus HOM05D003119 ORTHO05D003559 9.5e-110 401.0 302 61.9
TWI60G0203 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 4.7e-109 398.7 304 62.8
CiPaw.13G007600 Carya illinoinensis HOM05D003119 ORTHO05D003559 6.1e-109 398.3 301 63.1
Solyc01g087610.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 6.1e-109 398.3 314 62.1
Glyma.10G091000 Glycine max HOM05D003119 ORTHO05D003559 8.0e-109 397.9 307 60.9
Potri.009G058100 Populus trichocarpa HOM05D003119 ORTHO05D003559 8.0e-109 397.9 304 62.2
Zm00001eb394460 Zea mays HOM05D003119 ORTHO05D003559 8.0e-109 397.9 303 60.4
Aqoxy4G00031 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 1.4e-108 397.1 304 62.8
CSS0008603 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 1.4e-108 397.1 304 61.2
Hma1.2p1_1042F.1_g251140 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 1.8e-108 396.7 303 60.7
Ca_14529_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 3.0e-108 396.0 310 59.7
CSS0027617 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 4.0e-108 395.6 306 60.8
Sopen01g034580 Solanum pennellii HOM05D003119 ORTHO05D003559 5.2e-108 395.2 314 61.8
arahy.Tifrunner.gnm1.ann1.X582RR Arachis hypogaea HOM05D003119 ORTHO05D003559 6.8e-108 394.8 348 56.0
Lsat_1_v5_gn_4_32101 Lactuca sativa HOM05D003119 ORTHO05D003559 3.4e-107 392.5 300 61.0
FAN10G2435 Fragaria x ananassa HOM05D003119 ORTHO05D003559 7.5e-107 391.3 334 58.4
VMungo1080G0526 Vigna mungo HOM05D003119 ORTHO05D003559 7.5e-107 391.3 308 60.7
Lj3g0004567 Lotus japonicus HOM05D003119 ORTHO05D003559 9.8e-107 391.0 307 59.9
arahy.Tifrunner.gnm1.ann1.SMYW0Q Arachis hypogaea HOM05D003119 ORTHO05D003559 1.3e-106 390.6 305 60.7
Medtr3g032980 Medicago truncatula HOM05D003119 ORTHO05D003559 1.3e-106 390.6 310 60.0
CAN.G219.63 Capsicum annuum HOM05D003119 ORTHO05D003559 1.7e-106 390.2 308 61.7
Lj7A574G60 Lonicera japonica HOM05D003119 ORTHO05D003559 1.7e-106 390.2 306 61.1
Cfa010802 Carpinus fangiana HOM05D003119 ORTHO05D003559 3.7e-106 389.0 301 60.8
Cc02_g29010 Coffea canephora HOM05D003119 ORTHO05D003559 3.7e-106 389.0 304 58.9
Eucgr.G03358 Eucalyptus grandis HOM05D003119 ORTHO05D003559 3.7e-106 389.0 307 60.6
Lalb_Chr04g0263891 Lupinus albus HOM05D003119 ORTHO05D003559 6.4e-106 388.3 309 58.6
Sc10g0000230 Simmondsia chinensis HOM05D003119 ORTHO05D003559 6.4e-106 388.3 303 60.4
PGR031G0137 Punica granatum HOM05D003119 ORTHO05D003559 8.3e-106 387.9 301 61.1
ECA234G0904 Erigeron canadensis HOM05D003119 ORTHO05D003559 1.8e-105 386.7 305 60.0
HPP92_012079 Vanilla planifolia HOM05D003119 ORTHO05D003559 3.2e-105 386.0 301 61.1
AUR62023087 Chenopodium quinoa HOM05D003119 ORTHO05D003559 9.2e-105 384.4 306 58.5
QL04p009441 Quercus lobata HOM05D003119 ORTHO05D003559 9.2e-105 384.4 301 60.8
ATR0626G097 Amborella trichopoda HOM05D003119 ORTHO05D003559 1.6e-104 383.6 303 60.7
EL10Ac2g04355 Beta vulgaris HOM05D003119 ORTHO05D003559 2.0e-104 383.3 304 59.2
Migut.B01276 Erythranthe guttata HOM05D003119 ORTHO05D003559 3.5e-104 382.5 302 58.3
QL04p009277 Quercus lobata HOM05D003119 ORTHO05D003559 1.0e-103 380.9 301 60.8
FAN01G3156 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.7e-103 380.2 334 57.2
MSTRG.20565 Avicennia marina HOM05D003119 ORTHO05D003559 2.3e-103 379.8 308 59.4
CiPaw.14G002300 Carya illinoinensis HOM05D003119 ORTHO05D003559 3.0e-103 379.4 301 59.8
Sed0001972 Sechium edule HOM05D003119 ORTHO05D003559 8.6e-103 377.9 305 59.7
AUR62009404 Chenopodium quinoa HOM05D003119 ORTHO05D003559 3.3e-102 375.9 301 58.1
Ciclev10030724m.g Citrus clementina HOM05D003119 ORTHO05D003559 4.3e-102 375.6 309 57.9
DCAR_003225 Daucus carota HOM05D003119 ORTHO05D003559 9.5e-102 374.4 300 58.3
SalBow5G4976 Salvia bowleyana HOM05D003119 ORTHO05D003559 2.8e-101 372.9 307 56.7
THA.LOC104809848 Tarenaya hassleriana HOM05D003119 ORTHO05D003559 2.8e-101 372.9 309 58.3
Phvul.005G023300 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 1.4e-100 370.5 307 58.3
CsaV3_7G030810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 1.8e-100 370.2 301 58.5
CARHR199750 Cardamine hirsuta HOM05D003119 ORTHO05D003559 2.3e-100 369.8 311 55.9
FAN01G1325 Fragaria x ananassa HOM05D003119 ORTHO05D003559 2.3e-100 369.8 361 52.9
AL6G24300 Arabidopsis lyrata HOM05D003119 ORTHO05D003559 3.1e-100 369.4 311 58.2
Thhalv10012727m.g Eutrema salsugineum HOM05D003119 ORTHO05D003559 5.2e-100 368.6 319 56.7
Sp6g30330 Schrenkiella parvula HOM05D003119 ORTHO05D003559 5.2e-100 368.6 319 56.1
Rhsim07G0058300 Rhododendron simsii HOM05D003119 ORTHO05D003559 3.4e-99 365.9 267 64.8
HPP92_012082 Vanilla planifolia HOM05D003119 ORTHO05D003559 4.4e-99 365.5 301 58.1
AT5G13690 Arabidopsis thaliana HOM05D003119 ORTHO05D003559 5.8e-99 365.2 311 56.9
BcaNung04192 Brassica carinata HOM05D003119 ORTHO05D003559 2.2e-98 363.2 309 56.0
Carub.0006s1185 Capsella rubella HOM05D003119 ORTHO05D003559 4.9e-98 362.1 311 56.9
Aa31sc576G10 Aethionema arabicum HOM05D003119 ORTHO05D003559 9.2e-97 357.8 311 55.3
Psat5g211360 Pisum sativum HOM05D003119 ORTHO05D003559 1.7e-95 353.6 309 54.7
MELO3C023569.2 Cucumis melo HOM05D003119 ORTHO05D003559 2.3e-95 353.2 303 57.1
Dinv43414 Davidia involucrata HOM05D003119 ORTHO05D003559 1.9e-94 350.1 303 56.4
TPR.G28382 Trifolium pratense HOM05D000009 ORTHO05D003559 2.5e-94 349.7 289 57.1
Sabra09G0042700 Salix brachista HOM05D003119 ORTHO05D003559 1.1e-92 344.4 269 61.0
ECA232G0870 Erigeron canadensis HOM05D003119 ORTHO05D003559 1.1e-89 334.3 302 52.3
PGSC0003DMG400024584 Solanum tuberosum HOM05D003119 ORTHO05D003559 1.9e-89 333.6 308 51.6
Solyc03g113820.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 3.2e-89 332.8 304 52.0
Potri.012G075932 Populus trichocarpa HOM05D003119 ORTHO05D003559 9.2e-89 331.3 304 51.3
HanXRQChr09g0271881 Helianthus annuus HOM05D003119 ORTHO05D003559 1.2e-88 330.9 302 52.3
BcaC04g24265 Brassica carinata HOM05D003119 ORTHO05D003559 1.6e-88 330.5 316 52.5
Lsat_1_v5_gn_4_73520 Lactuca sativa HOM05D003119 ORTHO05D003559 1.6e-88 330.5 302 51.0
ClCG09G003910 Citrullus lanatus HOM05D003119 ORTHO05D003559 1.0e-87 327.8 267 59.6
Hma1.2p1_0002F.1_g002830 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 1.3e-87 327.4 304 50.7
unitig_61.g26361 Utricularia gibba HOM05D003119 ORTHO05D003559 1.7e-87 327.0 301 52.2
Peaxi162Scf00017g02524 Petunia axillaris HOM05D003119 ORTHO05D003559 3.0e-87 326.2 307 51.1
SEGI_13141 Sequoiadendron giganteum HOM05D003119 ORTHO05D003559 1.5e-86 323.9 307 52.1
FvH4_5g16380 Fragaria vesca HOM05D003119 ORTHO05D003559 2.5e-86 323.2 302 50.7
FAN18G1370 Fragaria x ananassa HOM05D003119 ORTHO05D003559 2.5e-86 323.2 302 50.7
RcHm_v2.0_Chr7g0179741 Rosa chinensis HOM05D003119 ORTHO05D003559 2.5e-86 323.2 302 51.3
Duzib205G0437 Durio zibethinus HOM05D003119 ORTHO05D003559 3.3e-86 322.8 303 50.8
vmacro19356 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 3.3e-86 322.8 306 50.7
Prupe.5G179300 Prunus persica HOM05D003119 ORTHO05D003559 4.3e-86 322.4 304 52.3
CSS0022012 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 5.6e-86 322.0 306 50.0
GSVIVG01007826001 Vitis vinifera HOM05D003119 ORTHO05D003559 9.5e-86 321.2 311 50.5
CAN.G853.15 Capsicum annuum HOM05D003119 ORTHO05D003559 1.2e-85 320.9 319 49.5
Atru.chr9.2402 Acer truncatum HOM05D003119 ORTHO05D003559 2.1e-85 320.1 306 52.0
Rhsim08G0167900 Rhododendron simsii HOM05D003119 ORTHO05D003559 2.1e-85 320.1 304 49.7
MD14G1187100 Malus domestica HOM05D003119 ORTHO05D003559 3.6e-85 319.3 302 51.7
Ciclev10018883m.g Citrus clementina HOM05D003119 ORTHO05D003559 4.7e-85 318.9 306 50.0
QL10p012342 Quercus lobata HOM05D003119 ORTHO05D003559 4.7e-85 318.9 302 50.7
Gorai.001G078400 Gossypium raimondii HOM05D003119 ORTHO05D003559 8.1e-85 318.2 303 50.8
Phvul.009G182100 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 1.8e-84 317.0 304 51.0
Nitab4.5_0003386g0030 Nicotiana tabacum HOM05D003119 ORTHO05D003559 2.3e-84 316.6 294 50.7
Gohir.D07G074200 Gossypium hirsutum HOM05D003119 ORTHO05D003559 3.1e-84 316.2 303 50.5
VMungo1309G2946 Vigna mungo HOM05D003119 ORTHO05D003559 5.2e-84 315.5 304 51.3
TPR.G31478 Trifolium pratense HOM05D003119 ORTHO05D003559 8.9e-84 314.7 337 48.1
ATR0712G088 Amborella trichopoda HOM05D003119 ORTHO05D003559 1.5e-83 313.9 306 47.4
Ca_16209_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 1.5e-83 313.9 305 50.2
Medtr3g078410 Medicago truncatula HOM05D003119 ORTHO05D003559 1.5e-83 313.9 302 50.3
Oeu018528.1 Olea europaea HOM05D003119 ORTHO05D003559 1.5e-83 313.9 302 48.3
SGA_v2.0_scaffold119G32756 Striga asiatica HOM05D003119 ORTHO05D003559 2.0e-83 313.5 302 50.0
TWI15G0194 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 2.0e-83 313.5 302 49.0
Gohir.A07G069566 Gossypium hirsutum HOM05D003119 ORTHO05D003559 3.4e-83 312.8 317 48.6
Thecc.03G004100 Theobroma cacao HOM05D003119 ORTHO05D003559 3.4e-83 312.8 307 50.5
TAR629G2536 Trochodendron aralioides HOM05D003119 ORTHO05D003559 3.4e-83 312.8 304 49.7
arahy.Tifrunner.gnm1.ann1.P53GXH Arachis hypogaea HOM05D003119 ORTHO05D003559 5.8e-83 312.0 307 48.9
Eucgr.B00338 Eucalyptus grandis HOM05D003119 ORTHO05D003559 7.6e-83 311.6 304 48.7
Psat0s489g0080 Pisum sativum HOM05D003119 ORTHO05D003559 9.9e-83 311.2 302 49.7
Dinv20699 Davidia involucrata HOM05D003119 ORTHO05D003559 1.3e-82 310.8 304 49.0
Lj1g0014859 Lotus japonicus HOM05D003119 ORTHO05D003559 1.3e-82 310.8 302 50.3
Glyma.06G186000 Glycine max HOM05D003119 ORTHO05D003559 3.7e-82 309.3 302 49.7
Mapoly0144s0027 Marchantia polymorpha HOM05D003119 ORTHO05D003559 6.4e-82 308.5 306 50.7
AagrBONN_evm.TU.Sc2ySwM_362.673 Anthoceros agrestis HOM05D003119 ORTHO05D003559 1.4e-81 307.4 301 49.5
Lj9C454T4 Lonicera japonica HOM05D003119 ORTHO05D003559 1.4e-81 307.4 306 49.3
Manes.14G070200 Manihot esculenta HOM05D003119 ORTHO05D003559 2.4e-81 306.6 302 49.0
Cc04_g12970 Coffea canephora HOM05D003119 ORTHO05D003559 3.2e-81 306.2 305 47.2
FAN08G2581 Fragaria x ananassa HOM05D003119 ORTHO05D003559 4.1e-81 305.8 338 45.3
arahy.Tifrunner.gnm1.ann1.7YSS56 Arachis hypogaea HOM05D003119 ORTHO05D003559 2.1e-80 303.5 323 46.7
PGR083G0248 Punica granatum HOM05D003119 ORTHO05D003559 2.7e-80 303.1 305 49.2
SalBow3G3123 Salvia bowleyana HOM05D003119 ORTHO05D003559 4.6e-80 302.4 305 47.2
Atru.chr11.2581 Acer truncatum HOM05D003119 ORTHO05D003559 6.0e-80 302.0 226 63.7
Cpa.g.sc35.39 Carica papaya HOM05D003119 ORTHO05D003559 2.3e-79 300.1 304 48.0
Haze_07437 Corylus avellana HOM05D003119 ORTHO05D003559 5.1e-79 298.9 294 49.7
PSO832G2904 Papaver somniferum HOM05D003119 ORTHO05D003559 6.6e-79 298.5 304 47.4
Sed0021395 Sechium edule HOM05D003119 ORTHO05D003559 6.6e-79 298.5 302 47.4
MELO3C017123.2 Cucumis melo HOM05D003119 ORTHO05D003559 8.6e-79 298.1 303 47.2
Pp3c17_12040 Physcomitrium patens HOM05D003119 ORTHO05D003559 4.3e-78 295.8 301 49.2
CsaV3_1G001810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 1.2e-77 294.3 306 46.1
Aqoxy3G03116 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 3.4e-75 286.2 303 44.6
Sopen03g032870 Solanum pennellii HOM05D003119 ORTHO05D003559 9.9e-75 284.6 268 51.1
SMO141G0099 Selaginella moellendorffii HOM05D003119 ORTHO05D003559 4.9e-74 282.3 300 47.7
ClCG06G016700 Citrullus lanatus HOM05D003119 ORTHO05D003559 5.4e-73 278.9 305 44.6
Haze_03156 Corylus avellana HOM05D003119 ORTHO05D003559 1.6e-72 277.3 223 60.1
Nitab4.5_0008927g0020 Nicotiana tabacum HOM05D003119 ORTHO05D003559 2.3e-71 273.5 266 49.2
Sabra12G0054000 Salix brachista HOM05D003119 ORTHO05D003559 5.1e-71 272.3 268 48.9
FAN13G2511 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.5e-70 270.8 313 44.4
Zm00001eb068240 Zea mays HOM05D003119 ORTHO05D003559 1.8e-68 263.8 303 43.9
SEGI_39203 Sequoiadendron giganteum HOM05D003119 ORTHO05D003559 4.9e-66 255.8 183 62.3
MBI14_g13279_MAGBIO Magnolia biondii HOM05D003119 ORTHO05D003559 9.3e-65 251.5 267 46.1
FvH4_7g01470 Fragaria vesca HOM05D003119 ORTHO05D003559 1.8e-60 237.3 205 58.5
Migut.D01907 Erythranthe guttata HOM05D003119 ORTHO05D003559 4.1e-44 183.0 207 44.9
Prupe.5G179500 Prunus persica HOM05D003119 ORTHO05D003559 8.5e-42 175.3 136 57.4
Actinidia04959 Actinidia chinensis HOM05D003119 ORTHO05D003559 1.9e-38 164.1 134 53.7
Medtr3g435710 Medicago truncatula HOM05D003119 ORTHO05D003559 1.7e-26 124.4 110 52.7
Actinidia04960 Actinidia chinensis HOM05D003119 ORTHO05D003559 8.2e-13 79.0 70 51.4
MCO16G065 Micromonas commoda HOM05D003119 ORTHO05D003559 1.9e-09 67.8 173 28.9
Solyc03g113840.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 3.4e-06 57.0 38 60.5
Sopen03g032890 Solanum pennellii HOM05D003119 ORTHO05D003559 4.4e-06 56.6 38 60.5


User provided reference genes

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