Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.2e-55 219.5 105 100.0
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 6.7e-51 203.8 105 94.3
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 1.8e-32 142.5 108 63.9
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 5.3e-32 141.0 109 64.2
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 1.3e-30 136.3 107 59.8
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 8.5e-30 133.7 105 61.9
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 5.5e-29 131.0 104 57.7
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 7.2e-29 130.6 105 59.0
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 7.2e-29 130.6 122 54.9
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 1.2e-28 129.8 106 60.4
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 2.1e-28 129.0 108 60.2
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 4.7e-28 127.9 116 56.0
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 6.1e-28 127.5 97 64.9
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 8.0e-28 127.1 118 56.8
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 8.0e-28 127.1 108 60.2
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 1.0e-27 126.7 118 54.2
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 1.4e-27 126.3 114 58.8
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 1.8e-27 125.9 78 74.4
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 1.8e-27 125.9 111 59.5
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 2.3e-27 125.6 71 81.7
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 3.0e-27 125.2 67 80.6
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 4.0e-27 124.8 67 80.6
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 4.0e-27 124.8 94 61.7
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 5.2e-27 124.4 88 70.5
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 6.7e-27 124.0 86 69.8
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 1.1e-26 123.2 109 57.8
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 1.5e-26 122.9 88 65.9
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 2.0e-26 122.5 117 55.6
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 2.6e-26 122.1 83 68.7
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 3.3e-26 121.7 72 77.8
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 4.4e-26 121.3 115 54.8
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 4.4e-26 121.3 114 54.4
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 4.4e-26 121.3 67 77.6
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 4.4e-26 121.3 109 56.0
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 4.4e-26 121.3 82 64.6
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 5.7e-26 120.9 108 53.7
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 5.7e-26 120.9 81 71.6
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 5.7e-26 120.9 76 71.1
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 5.7e-26 120.9 109 56.0
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 5.7e-26 120.9 109 52.3
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 7.5e-26 120.6 106 60.4
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 7.5e-26 120.6 65 78.5
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 7.5e-26 120.6 67 76.1
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 7.5e-26 120.6 67 76.1
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 9.7e-26 120.2 81 69.1
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 9.7e-26 120.2 98 60.2
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 9.7e-26 120.2 112 51.8
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 1.3e-25 119.8 107 55.1
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 1.3e-25 119.8 65 80.0
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 1.3e-25 119.8 65 81.5
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.3e-25 119.8 114 54.4
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 1.3e-25 119.8 120 53.3
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 1.7e-25 119.4 80 67.5
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 1.7e-25 119.4 102 56.9
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 1.7e-25 119.4 69 76.8
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 1.7e-25 119.4 65 78.5
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 1.7e-25 119.4 67 73.1
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 2.2e-25 119.0 70 77.1
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 2.2e-25 119.0 73 74.0
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.8e-25 118.6 67 74.6
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.8e-25 118.6 73 75.3
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.8e-25 118.6 73 75.3
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 2.8e-25 118.6 81 70.4
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 3.7e-25 118.2 109 51.4
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 3.7e-25 118.2 109 53.2
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 3.7e-25 118.2 89 65.2
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 3.7e-25 118.2 67 74.6
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 3.7e-25 118.2 109 50.5
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 4.8e-25 117.9 63 81.0
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 4.8e-25 117.9 108 52.8
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 4.8e-25 117.9 69 75.4
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 6.3e-25 117.5 67 73.1
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 6.3e-25 117.5 109 55.0
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 6.3e-25 117.5 109 55.0
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 6.3e-25 117.5 109 55.0
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 6.3e-25 117.5 67 73.1
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 6.3e-25 117.5 66 77.3
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 6.3e-25 117.5 66 77.3
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 6.3e-25 117.5 120 51.7
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 6.3e-25 117.5 97 58.8
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 6.3e-25 117.5 81 67.9
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 8.2e-25 117.1 63 81.0
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 8.2e-25 117.1 68 76.5
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 8.2e-25 117.1 69 76.8
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 8.2e-25 117.1 69 76.8
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.1e-24 116.7 107 54.2
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 1.4e-24 116.3 109 55.0
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 1.4e-24 116.3 65 76.9
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 1.4e-24 116.3 69 76.8
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 1.4e-24 116.3 67 77.6
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 2.4e-24 115.5 69 73.9
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 3.1e-24 115.2 79 69.6
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 3.1e-24 115.2 108 50.9
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 3.1e-24 115.2 108 52.8
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 4.1e-24 114.8 64 75.0
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 2.0e-23 112.5 109 53.2
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 3.5e-23 111.7 146 45.2
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 4.5e-23 111.3 109 53.2
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 1.9e-21 105.9 66 71.2
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 8.0e-20 100.5 61 68.9
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.5e-18 96.3 69 62.3
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 3.4e-18 95.1 84 58.3
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 1.3e-17 93.2 67 59.7
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 2.5e-13 79.0 62 54.8
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 8.0e-12 73.9 86 51.2
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 7.5e-10 67.4 76 47.4
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 1.7e-09 66.2 94 42.6
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 9.2e-08 60.5 41 65.9
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 2.7e-07 58.9 26 92.3


User provided reference genes

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