Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G1084 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 5.3e-251 870.5 440 100.0
CDE09G1050 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 4.4e-237 824.3 440 94.5
MBI04_g35272_MAGBIO Magnolia biondii HOM05D005813 ORTHO05D007310 4.3e-176 621.7 440 70.0
Nn1g01240 Nelumbo nucifera HOM05D005813 ORTHO05D007310 5.1e-169 598.2 440 68.0
Nn4g26391 Nelumbo nucifera HOM05D005813 ORTHO05D007310 1.1e-168 597.0 440 67.0
TAR374G0529 Trochodendron aralioides HOM05D005813 ORTHO05D007310 4.3e-168 595.1 436 67.9
TWI59G1428 Tripterygium wilfordii HOM05D005813 ORTHO05D007310 9.0e-166 587.4 429 67.1
Lj1g0017617 Lotus japonicus HOM05D005813 ORTHO05D007310 2.6e-165 585.9 434 66.8
MELO3C006191.2 Cucumis melo HOM05D005813 ORTHO05D007310 1.0e-164 583.9 431 68.0
Duzib133G0639 Durio zibethinus HOM05D005813 ORTHO05D007310 4.9e-164 581.6 434 65.4
CsaV3_3G009700 Cucumis sativus L. HOM05D005813 ORTHO05D007310 1.9e-163 579.7 432 67.4
Duzib138G0196 Durio zibethinus HOM05D005813 ORTHO05D007310 4.2e-163 578.6 435 65.5
Manes.05G045300 Manihot esculenta HOM05D005813 ORTHO05D007310 5.5e-163 578.2 431 65.7
Ca_11657_v3 Cicer arietinum L. HOM05D005813 ORTHO05D007310 7.1e-163 577.8 431 65.7
CSS0030666 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 9.3e-163 577.4 427 67.9
CSS0042195 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 9.3e-163 577.4 427 67.9
Cfa001724 Carpinus fangiana HOM05D005813 ORTHO05D007310 9.3e-163 577.4 430 65.8
Glyma.18G220700 Glycine max HOM05D005813 ORTHO05D007310 9.3e-163 577.4 435 64.8
ClCG05G002290 Citrullus lanatus HOM05D005813 ORTHO05D007310 2.1e-162 576.2 432 66.4
Migut.B01633 Erythranthe guttata HOM05D005813 ORTHO05D007310 2.1e-162 576.2 428 66.4
QL08p052527 Quercus lobata HOM05D005813 ORTHO05D007310 2.7e-162 575.9 428 66.8
PSO478G4467 Papaver somniferum HOM05D005813 ORTHO05D007310 4.6e-162 575.1 436 65.1
MD02G1204700 Malus domestica HOM05D005813 ORTHO05D007310 7.9e-162 574.3 437 66.4
Lj7A528T62 Lonicera japonica HOM05D005813 ORTHO05D007310 1.0e-161 573.9 451 65.0
Ciclev10020183m.g Citrus clementina HOM05D005813 ORTHO05D007310 1.3e-161 573.5 438 66.7
CiPaw.02G167800 Carya illinoinensis HOM05D005813 ORTHO05D007310 1.8e-161 573.2 431 64.5
Glyma.09G269300 Glycine max HOM05D005813 ORTHO05D007310 1.8e-161 573.2 435 64.4
PSO782G1692 Papaver somniferum HOM05D005813 ORTHO05D007310 3.9e-161 572.0 436 64.2
PGR031G3848 Punica granatum HOM05D005813 ORTHO05D007310 5.1e-161 571.6 431 65.2
Thecc.01G376600 Theobroma cacao HOM05D005813 ORTHO05D007310 5.1e-161 571.6 434 65.0
Potri.014G069400 Populus trichocarpa HOM05D005813 ORTHO05D007310 6.7e-161 571.2 434 65.9
THA.LOC104817009 Tarenaya hassleriana HOM05D005813 ORTHO05D007310 8.7e-161 570.9 430 65.6
Sc02g0002610 Simmondsia chinensis HOM05D005813 ORTHO05D007310 1.1e-160 570.5 436 64.4
Prupe.2G145000 Prunus persica HOM05D005813 ORTHO05D007310 1.5e-160 570.1 430 66.0
Aqoxy7G00631 Aquilegia oxysepala HOM05D005813 ORTHO05D007310 1.9e-160 569.7 434 66.1
CiPaw.01G262200 Carya illinoinensis HOM05D005813 ORTHO05D007310 1.9e-160 569.7 431 65.7
VMungo1383G1345 Vigna mungo HOM05D005813 ORTHO05D007310 1.9e-160 569.7 435 64.8
ATR0810G089 Amborella trichopoda HOM05D005813 ORTHO05D007310 4.3e-160 568.5 435 64.4
Medtr7g074890 Medicago truncatula HOM05D005813 ORTHO05D007310 5.7e-160 568.2 427 64.6
TPR.G29407 Trifolium pratense HOM05D005813 ORTHO05D007310 5.7e-160 568.2 429 65.7
arahy.Tifrunner.gnm1.ann1.4B5N4V Arachis hypogaea HOM05D005813 ORTHO05D007310 9.7e-160 567.4 432 64.1
CANSAT56G4177 Cannabis sativa HOM05D005813 ORTHO05D007310 1.6e-159 566.6 440 65.0
Phvul.008G076400 Phaseolus vulgaris HOM05D005813 ORTHO05D007310 2.8e-159 565.8 435 65.1
Lalb_Chr03g0039571 Lupinus albus HOM05D005813 ORTHO05D007310 6.3e-159 564.7 435 63.4
CARHR248130 Cardamine hirsuta HOM05D005813 ORTHO05D007310 8.2e-159 564.3 426 66.0
AL6G53420 Arabidopsis lyrata HOM05D005813 ORTHO05D007310 1.4e-158 563.5 426 66.2
Cpa.g.sc18.111 Carica papaya HOM05D005813 ORTHO05D007310 1.4e-158 563.5 435 65.3
MSTRG.17192 Avicennia marina HOM05D005813 ORTHO05D007310 1.8e-158 563.1 437 63.8
Hund27345 Selenicereus undatus HOM05D005813 ORTHO05D007310 4.1e-158 562.0 437 63.8
Eucgr.D02453 Eucalyptus grandis HOM05D005813 ORTHO05D007310 5.3e-158 561.6 433 65.1
Cc02_g23900 Coffea canephora HOM05D005813 ORTHO05D007310 9.0e-158 560.8 434 63.4
SGA_v2.0_scaffold153G37009 Striga asiatica HOM05D005813 ORTHO05D007310 9.0e-158 560.8 437 62.2
FAN10G1195 Fragaria x ananassa HOM05D005813 ORTHO05D007310 1.2e-157 560.5 431 65.7
Nitab4.5_0004917g0040 Nicotiana tabacum HOM05D005813 ORTHO05D007310 1.2e-157 560.5 436 63.3
Sp6g00150 Schrenkiella parvula HOM05D005813 ORTHO05D007310 1.2e-157 560.5 428 65.7
AT4G00090 Arabidopsis thaliana HOM05D005813 ORTHO05D007310 3.4e-157 558.9 428 65.2
C09p00110 Brassica napus HOM05D005813 ORTHO05D007310 4.5e-157 558.5 430 65.1
BraA09t35685Z Brassica rapa HOM05D005813 ORTHO05D007310 4.5e-157 558.5 430 65.1
Sabra02G0117100 Salix brachista HOM05D005813 ORTHO05D007310 4.5e-157 558.5 447 64.2
Gohir.A08G031100 Gossypium hirsutum HOM05D005813 ORTHO05D007310 5.9e-157 558.1 432 63.9
BcaB01g02210 Brassica carinata HOM05D005813 ORTHO05D007310 1.0e-156 557.4 427 65.6
FAN01G0479 Fragaria x ananassa HOM05D005813 ORTHO05D007310 1.3e-156 557.0 431 65.4
Sabra02G0115400 Salix brachista HOM05D005813 ORTHO05D007310 1.7e-156 556.6 453 63.4
arahy.Tifrunner.gnm1.ann1.DKE7V3 Arachis hypogaea HOM05D005813 ORTHO05D007310 2.2e-156 556.2 427 64.2
BcaC04g24202 Brassica carinata HOM05D005813 ORTHO05D007310 5.0e-156 555.1 430 65.3
BolC9t52946H Brassica oleracea HOM05D005813 ORTHO05D007310 5.0e-156 555.1 430 65.3
FvH4_7g11840 Fragaria vesca HOM05D005813 ORTHO05D007310 5.0e-156 555.1 431 65.2
FAN06G0614 Fragaria x ananassa HOM05D005813 ORTHO05D007310 5.0e-156 555.1 431 65.2
Carub.0006s3714 Capsella rubella HOM05D005813 ORTHO05D007310 6.5e-156 554.7 427 65.3
Potri.002G148100 Populus trichocarpa HOM05D005813 ORTHO05D007310 2.5e-155 552.7 434 64.1
Sed0028100 Sechium edule HOM05D005813 ORTHO05D007310 3.2e-155 552.4 431 64.7
unitig_749.g14372 Utricularia gibba HOM05D005813 ORTHO05D007310 3.2e-155 552.4 433 63.7
FAN10G2798 Fragaria x ananassa HOM05D005813 ORTHO05D007310 4.2e-155 552.0 431 65.0
Solyc01g091310.3 Solanum lycopersicum HOM05D005813 ORTHO05D007310 4.2e-155 552.0 439 62.6
Thhalv10028676m.g Eutrema salsugineum HOM05D005813 ORTHO05D007310 9.4e-155 550.8 428 65.0
EL10Ac1g00888 Beta vulgaris HOM05D005813 ORTHO05D007310 1.2e-154 550.4 437 62.9
Ah.05g174210 Amaranthus hybridus HOM05D005813 ORTHO05D007310 1.6e-154 550.1 433 62.8
AUR62004213 Chenopodium quinoa HOM05D005813 ORTHO05D007310 1.6e-154 550.1 437 63.6
GSVIVG01027606001 Vitis vinifera HOM05D005813 ORTHO05D007310 1.0e-153 547.4 406 68.5
Gohir.D08G042200 Gossypium hirsutum HOM05D005813 ORTHO05D007310 1.4e-153 547.0 432 62.7
MD07G1121300 Malus domestica HOM05D005813 ORTHO05D007310 1.4e-153 547.0 437 64.3
Sopen01g037050 Solanum pennellii HOM05D005813 ORTHO05D007310 3.9e-153 545.4 448 61.4
FAN06G1564 Fragaria x ananassa HOM05D005813 ORTHO05D007310 8.8e-153 544.3 443 63.2
Gohir.D08G155500 Gossypium hirsutum HOM05D005813 ORTHO05D007310 2.5e-152 542.7 435 62.5
Gorai.004G161700 Gossypium raimondii HOM05D005813 ORTHO05D007310 2.5e-152 542.7 435 62.5
Gohir.A08G134600 Gossypium hirsutum HOM05D005813 ORTHO05D007310 3.3e-152 542.3 435 62.5
SalBow5G4545 Salvia bowleyana HOM05D005813 ORTHO05D007310 3.3e-152 542.3 436 62.6
HanXRQChr04g0122421 Helianthus annuus HOM05D005813 ORTHO05D007310 1.1e-150 537.3 426 64.6
Lsat_1_v5_gn_7_7160 Lactuca sativa HOM05D005813 ORTHO05D007310 1.4e-150 537.0 426 64.6
RcHm_v2.0_Chr1g0350521 Rosa chinensis HOM05D005813 ORTHO05D007310 1.4e-150 537.0 435 64.1
Oeu055488.1 Olea europaea HOM05D005813 ORTHO05D007310 3.1e-150 535.8 465 58.5
Atru.chr5.306 Acer truncatum HOM05D005813 ORTHO05D007310 1.2e-149 533.9 434 63.6
Sed0000354 Sechium edule HOM05D005813 ORTHO05D007310 1.5e-149 533.5 404 65.8
Aa31LG5G9310 Aethionema arabicum HOM05D005813 ORTHO05D007310 7.7e-149 531.2 455 60.4
Dinv43710 Davidia involucrata HOM05D005813 ORTHO05D007310 8.5e-148 527.7 391 68.3
Gorai.004G040800 Gossypium raimondii HOM05D005813 ORTHO05D007310 8.5e-148 527.7 478 56.9
Haze_16813 Corylus avellana HOM05D005813 ORTHO05D007310 1.1e-147 527.3 398 65.8
Rhsim01G0147300 Rhododendron simsii HOM05D005813 ORTHO05D007310 2.7e-146 522.7 464 59.1
HPP92_003519 Vanilla planifolia HOM05D005813 ORTHO05D007310 7.4e-144 514.6 360 69.2
Zm00001eb065090 Zea mays HOM05D005813 ORTHO05D007310 1.7e-143 513.5 429 62.0
Nitab4.5_0000457g0240 Nicotiana tabacum HOM05D005813 ORTHO05D007310 3.7e-143 512.3 384 64.8
unitig_76.g29089 Utricularia gibba HOM05D005813 ORTHO05D007310 3.1e-142 509.2 389 65.3
SEGI_07293 Sequoiadendron giganteum HOM05D005813 ORTHO05D007310 1.2e-141 507.3 436 59.4
FAN03G1318 Fragaria x ananassa HOM05D005813 ORTHO05D007310 2.0e-141 506.5 391 65.5
vmacro21010 Vaccinium macrocarpon HOM05D005813 ORTHO05D007310 5.5e-139 498.4 447 59.5
Psat3g115920 Pisum sativum HOM05D005813 ORTHO05D007310 4.7e-138 495.4 431 58.7
Actinidia12685 Actinidia chinensis HOM05D005813 ORTHO05D007310 8.8e-137 491.1 426 59.6
AUR62013635 Chenopodium quinoa HOM05D005813 ORTHO05D007310 9.1e-134 481.1 448 56.9
Peaxi162Scf00013g03441 Petunia axillaris HOM05D005813 ORTHO05D007310 3.5e-133 479.2 395 61.8
Mapoly0037s0016 Marchantia polymorpha HOM05D005813 ORTHO05D007310 2.8e-127 459.5 424 54.0
Pp3c19_7620 Physcomitrium patens HOM05D005813 ORTHO05D007310 3.6e-122 442.6 435 52.4
AagrBONN_evm.TU.Sc2ySwM_117.33 Anthoceros agrestis HOM05D005813 ORTHO05D007310 8.8e-121 438.0 453 51.0
COL.COLO4_12543 Corchorus olitorius HOM05D005813 ORTHO05D007310 1.1e-118 431.0 434 53.7
A09p00750 Brassica napus HOM05D005813 ORTHO05D007310 1.2e-117 427.6 276 72.8
PGSC0003DMG400012776 Solanum tuberosum HOM05D005813 ORTHO05D007310 1.6e-114 417.2 275 70.2
DCAR_015903 Daucus carota HOM05D005813 ORTHO05D007310 2.8e-114 416.4 330 63.3
SMO367G0685 Selaginella moellendorffii HOM05D005813 ORTHO05D007310 1.4e-110 404.1 359 55.2
SHI01708 Sapria himalayana HOM05D005813 ORTHO05D007310 6.6e-108 395.2 430 50.7
PSO782G5041 Papaver somniferum HOM05D005813 ORTHO05D007310 2.8e-106 389.8 327 57.8
CBR_g23070 Chara braunii HOM05D005813 ORTHO05D007310 9.2e-102 374.8 457 47.0
CBR_g21297 Chara braunii HOM05D005813 ORTHO05D007310 7.8e-101 371.7 414 48.6
Psat3g202640 Pisum sativum HOM05D005813 ORTHO05D007310 1.0e-100 371.3 296 62.8
PSO170G3521 Papaver somniferum HOM05D005813 ORTHO05D007310 1.1e-99 367.9 352 52.3
PSO675G1684 Papaver somniferum HOM05D005813 ORTHO05D007310 4.3e-83 312.8 241 59.3
Actinidia33466 Actinidia chinensis HOM05D005813 ORTHO05D007310 1.6e-74 284.3 181 72.9
PSO478G0826 Papaver somniferum HOM05D005813 ORTHO05D007310 2.9e-55 220.3 156 67.9
Cre02.g102450 Chlamydomonas reinhardtii HOM05D005813 ORTHO05D007310 1.1e-49 201.8 420 31.7
MCO05G082 Micromonas commoda HOM05D005813 ORTHO05D007310 1.5e-43 181.4 413 31.2
PSO478G4170 Papaver somniferum HOM05D005813 ORTHO05D007310 4.2e-22 110.2 116 46.6
ATR0705G066 Amborella trichopoda HOM05D004669 ORTHO05D005767 1.1e-09 68.9 231 23.4
CSS0009653 Camellia sinensis var. sinensis HOM05D004669 ORTHO05D005767 1.6e-08 65.1 218 24.3
Lalb_Chr11g0073441 Lupinus albus HOM05D004669 ORTHO05D005767 2.0e-08 64.7 221 23.5
Cre06.g254150 Chlamydomonas reinhardtii HOM05D004669 ORTHO05D005767 2.7e-08 64.3 221 24.0
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 4.5e-08 63.5 361 21.9
AagrBONN_evm.TU.Sc2ySwM_228.2684 Anthoceros agrestis HOM05D005508 ORTHO05D006882 1.7e-07 61.6 285 24.2
ECA232G0673 Erigeron canadensis HOM05D005717 ORTHO05D007221 3.8e-07 60.5 216 25.0
Sed0011544 Sechium edule HOM05D005717 ORTHO05D007221 1.5e-06 58.5 264 23.1
Nn4g22656 Nelumbo nucifera HOM05D004386 ORTHO05D005247 2.5e-06 57.8 264 22.7
Cpa.g.sc3.215 Carica papaya HOM05D005717 ORTHO05D007221 5.5e-06 56.6 216 26.4
MELO3C031411.2 Cucumis melo HOM05D000544 ORTHO05D169468 5.5e-06 56.6 39 66.7
Lsat_1_v5_gn_4_112460 Lactuca sativa HOM05D005717 ORTHO05D007221 5.5e-06 56.6 225 24.0


User provided reference genes

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