Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G1025 Ceratophyllum demersum HOM05D007599 ORTHO05D009548 2.7e-29 131.7 87 100.0
CDE09G0527 Ceratophyllum demersum HOM05D007599 ORTHO05D009548 6.6e-28 127.1 87 94.3
Sopen10g024670 Solanum pennellii HOM05D007599 ORTHO05D009548 4.4e-16 87.8 88 53.4
Lsat_1_v5_gn_3_11180 Lactuca sativa HOM05D007599 ORTHO05D009548 9.9e-16 86.7 87 54.0
HanXRQChr17g0534931 Helianthus annuus HOM05D007599 ORTHO05D009548 2.2e-15 85.5 87 54.0
unitig_62.g23260 Utricularia gibba HOM05D007599 ORTHO05D009548 2.2e-15 85.5 87 55.2
Oeu029803.1 Olea europaea HOM05D007599 ORTHO05D009548 2.9e-15 85.1 84 56.0
GSVIVG01019698001 Vitis vinifera HOM05D007599 ORTHO05D009548 2.9e-15 85.1 86 59.3
Os02g0682600 Oryza sativa ssp. japonica HOM05D007599 ORTHO05D009548 6.4e-15 84.0 83 55.4
AL2G14680 Arabidopsis lyrata HOM05D007599 ORTHO05D009548 8.4e-15 83.6 87 54.0
PGSC0003DMG400012109 Solanum tuberosum HOM05D007599 ORTHO05D009548 1.1e-14 83.2 86 52.3
Solyc08g083380.2 Solanum lycopersicum HOM05D007599 ORTHO05D009548 2.4e-14 82.0 88 51.1
AT1G61570 Arabidopsis thaliana HOM05D007599 ORTHO05D009548 3.2e-14 81.6 87 66.7
MELO3C005802.2 Cucumis melo HOM05D007599 ORTHO05D009548 4.2e-14 81.3 83 60.2
CsaV3_5G001470 Cucumis sativus L. HOM05D007599 ORTHO05D009548 4.2e-14 81.3 83 60.2
Sc07g0010220 Simmondsia chinensis HOM05D007599 ORTHO05D009548 7.1e-14 80.5 87 52.9
EL10Ac5g12394 Beta vulgaris HOM05D007599 ORTHO05D009548 9.2e-14 80.1 88 51.1
Thhalv10019387m.g Eutrema salsugineum HOM05D007599 ORTHO05D009548 1.2e-13 79.7 82 50.0
AUR62007084 Chenopodium quinoa HOM05D007599 ORTHO05D009548 1.6e-13 79.3 87 55.2
AUR62019947 Chenopodium quinoa HOM05D007599 ORTHO05D009548 1.6e-13 79.3 87 55.2
AagrBONN_evm.TU.Sc2ySwM_117.1837 Anthoceros agrestis HOM05D007599 ORTHO05D009548 2.1e-13 79.0 83 50.6
Sed0012861 Sechium edule HOM05D007599 ORTHO05D009548 3.5e-13 78.2 83 54.2
ClCG01G001340 Citrullus lanatus HOM05D007599 ORTHO05D009548 6.0e-13 77.4 83 54.2
Actinidia22230 Actinidia chinensis HOM05D007599 ORTHO05D009548 1.3e-12 76.3 84 63.1
Pp3c25_10700 Physcomitrium patens HOM05D007599 ORTHO05D009548 1.3e-12 76.3 85 55.3
AagrBONN_evm.TU.Sc2ySwM_344.1292 Anthoceros agrestis HOM05D007599 ORTHO05D009548 2.3e-12 75.5 84 65.5
MSTRG.12224 Avicennia marina HOM05D007599 ORTHO05D009548 3.9e-12 74.7 78 52.6
Ciclev10023088m.g Citrus clementina HOM05D007599 ORTHO05D009548 1.1e-11 73.2 85 57.6
Gohir.A12G242400 Gossypium hirsutum HOM05D007599 ORTHO05D009548 1.1e-11 73.2 87 55.2
Atru.chr9.1835 Acer truncatum HOM05D007599 ORTHO05D009548 1.5e-11 72.8 86 47.7
Migut.E00717 Erythranthe guttata HOM05D007599 ORTHO05D009548 1.5e-11 72.8 66 69.7
Mapoly0015s0046 Marchantia polymorpha HOM05D007599 ORTHO05D009548 1.9e-11 72.4 85 45.9
Manes.02G000300 Manihot esculenta HOM05D007599 ORTHO05D009548 1.1e-09 66.6 85 67.1
Rhsim07G0075900 Rhododendron simsii HOM05D007599 ORTHO05D009548 1.1e-09 66.6 87 63.2
Manes.01G000403 Manihot esculenta HOM05D007599 ORTHO05D009548 2.4e-09 65.5 85 65.9
Carub.0002s0362 Capsella rubella HOM05D007599 ORTHO05D009548 4.0e-09 64.7 85 61.2
COL.COLO4_10843 Corchorus olitorius HOM05D007599 ORTHO05D009548 4.0e-09 64.7 93 52.7
Duzib084G0922 Durio zibethinus HOM05D007599 ORTHO05D009548 6.9e-09 63.9 85 43.5
TPR.G21312 Trifolium pratense HOM05D007599 ORTHO05D009548 6.9e-09 63.9 84 40.5
Cc08_g17030 Coffea canephora HOM05D007599 ORTHO05D009548 1.2e-08 63.2 90 65.6
Gohir.D12G243500 Gossypium hirsutum HOM05D007599 ORTHO05D009548 2.0e-08 62.4 87 63.2
Gorai.008G260900 Gossypium raimondii HOM05D007599 ORTHO05D009548 2.0e-08 62.4 87 63.2
CiPaw.12G074700 Carya illinoinensis HOM05D007599 ORTHO05D009548 4.4e-08 61.2 86 61.6
Sp5g30310 Schrenkiella parvula HOM05D007599 ORTHO05D009548 7.6e-08 60.5 82 58.5
Duzib068G0772 Durio zibethinus HOM05D007599 ORTHO05D009548 1.3e-07 59.7 85 62.4
Actinidia27277 Actinidia chinensis HOM05D007599 ORTHO05D009548 3.8e-07 58.2 84 63.1
CSS0029258 Camellia sinensis var. sinensis HOM05D007599 ORTHO05D009548 4.9e-07 57.8 84 61.9
FvH4_5g07140 Fragaria vesca HOM05D007599 ORTHO05D009548 4.9e-07 57.8 78 37.2
SGA_v2.0_scaffold88G27242 Striga asiatica HOM05D007599 ORTHO05D009548 6.4e-07 57.4 121 32.2
FAN18G2966 Fragaria x ananassa HOM05D007599 ORTHO05D009548 8.4e-07 57.0 110 33.6
TAR374G1499 Trochodendron aralioides HOM05D007599 ORTHO05D009548 2.4e-06 55.5 64 73.4
CARHR050820 Cardamine hirsuta HOM05D007599 ORTHO05D009548 4.2e-06 54.7 83 56.6
CBR_g48723 Chara braunii HOM05D007599 ORTHO05D009548 7.1e-06 53.9 85 60.0
FAN08G0537 Fragaria x ananassa HOM05D007599 ORTHO05D009548 7.1e-06 53.9 76 35.5


User provided reference genes

Program Settings