Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0987 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 6.7e-119 430.6 208 100.0
CDE11G0464 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 6.3e-101 370.9 269 72.5
CDE07G0124 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 1.4e-97 359.8 269 70.3
Solyc04g015740.3 Solanum lycopersicum HOM05D003650 ORTHO05D004213 4.4e-86 321.6 201 73.6
TWI77G0711 Tripterygium wilfordii HOM05D003650 ORTHO05D004213 4.1e-84 315.1 269 58.7
TWI74G1194 Tripterygium wilfordii HOM05D003650 ORTHO05D004213 2.6e-83 312.4 269 58.0
TAR633G1518 Trochodendron aralioides HOM05D003650 ORTHO05D004213 3.5e-83 312.0 269 59.1
TAR636G3054 Trochodendron aralioides HOM05D003650 ORTHO05D004213 1.0e-82 310.5 269 58.4
Nn2g15253 Nelumbo nucifera HOM05D003650 ORTHO05D004213 1.7e-82 309.7 271 58.7
Haze_19859 Corylus avellana HOM05D003650 ORTHO05D004213 5.0e-82 308.1 269 57.2
MD14G1071900 Malus domestica HOM05D003650 ORTHO05D004213 6.5e-82 307.8 269 57.2
MD12G1073600 Malus domestica HOM05D003650 ORTHO05D004213 1.9e-81 306.2 269 56.9
CSS0010444 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 2.5e-81 305.8 269 57.2
COL.COLO4_28278 Corchorus olitorius HOM05D003650 ORTHO05D004213 2.5e-81 305.8 269 56.5
Dinv12480 Davidia involucrata HOM05D003650 ORTHO05D004213 3.2e-81 305.4 269 56.9
Prupe.7G061300 Prunus persica HOM05D003650 ORTHO05D004213 3.2e-81 305.4 269 57.6
SalBow6G5443 Salvia bowleyana HOM05D003650 ORTHO05D004213 3.2e-81 305.4 269 56.1
AT2G41770 Arabidopsis thaliana HOM05D003650 ORTHO05D004213 4.2e-81 305.1 266 56.0
Gorai.006G136700 Gossypium raimondii HOM05D003650 ORTHO05D004213 4.2e-81 305.1 262 56.5
BcaNung06246 Brassica carinata HOM05D003650 ORTHO05D004213 5.5e-81 304.7 269 56.1
CANSAT80G1317 Cannabis sativa HOM05D003650 ORTHO05D004213 7.2e-81 304.3 269 57.2
CANSAT80G0970 Cannabis sativa HOM05D003650 ORTHO05D004213 9.4e-81 303.9 269 56.9
Thhalv10016286m.g Eutrema salsugineum HOM05D003650 ORTHO05D004213 1.2e-80 303.5 269 55.4
FvH4_6g23790 Fragaria vesca HOM05D003650 ORTHO05D004213 1.2e-80 303.5 270 57.0
FAN02G1020 Fragaria x ananassa HOM05D003650 ORTHO05D004213 1.2e-80 303.5 270 57.0
FAN05G4085 Fragaria x ananassa HOM05D003650 ORTHO05D004213 1.2e-80 303.5 270 57.0
FAN09G0940 Fragaria x ananassa HOM05D003650 ORTHO05D004213 1.2e-80 303.5 270 57.0
FAN14G5543 Fragaria x ananassa HOM05D003650 ORTHO05D004213 1.2e-80 303.5 270 57.0
PSO339G5560 Papaver somniferum HOM05D003650 ORTHO05D004213 1.6e-80 303.1 269 58.0
THA.LOC104802108 Tarenaya hassleriana HOM05D003650 ORTHO05D004213 1.6e-80 303.1 269 55.4
RcHm_v2.0_Chr3g0482321 Rosa chinensis HOM05D003650 ORTHO05D004213 2.1e-80 302.8 270 55.9
AL4G40080 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 2.7e-80 302.4 269 55.4
EL10Ac3g07088 Beta vulgaris HOM05D003650 ORTHO05D004213 2.7e-80 302.4 269 56.1
CiPaw.09G038100 Carya illinoinensis HOM05D003650 ORTHO05D004213 2.7e-80 302.4 269 56.1
Ah.13g076450 Amaranthus hybridus HOM05D003650 ORTHO05D004213 3.6e-80 302.0 269 55.8
A03p23420 Brassica napus HOM05D003650 ORTHO05D004213 3.6e-80 302.0 269 55.4
C03p27940 Brassica napus HOM05D003650 ORTHO05D004213 3.6e-80 302.0 269 55.4
BolC3t15166H Brassica oleracea HOM05D003650 ORTHO05D004213 3.6e-80 302.0 269 55.4
CiPaw.10G033200 Carya illinoinensis HOM05D003650 ORTHO05D004213 3.6e-80 302.0 269 55.4
PSO384G3418 Papaver somniferum HOM05D003650 ORTHO05D004213 3.6e-80 302.0 269 57.6
Actinidia09330 Actinidia chinensis HOM05D003650 ORTHO05D004213 4.7e-80 301.6 269 56.5
PGR004G2044 Punica granatum HOM05D003650 ORTHO05D004213 4.7e-80 301.6 269 56.5
MSTRG.6431 Avicennia marina HOM05D003650 ORTHO05D004213 6.1e-80 301.2 269 56.5
Sopen04g007820 Solanum pennellii HOM05D003650 ORTHO05D004213 6.1e-80 301.2 269 56.1
PGSC0003DMG400027249 Solanum tuberosum HOM05D003650 ORTHO05D004213 6.1e-80 301.2 269 56.1
Aqoxy2G00151 Aquilegia oxysepala HOM05D003650 ORTHO05D004213 8.0e-80 300.8 269 57.2
BraA03t11559Z Brassica rapa HOM05D003650 ORTHO05D004213 8.0e-80 300.8 269 55.0
Sc13g0001770 Simmondsia chinensis HOM05D003650 ORTHO05D004213 8.0e-80 300.8 271 55.7
Eucgr.A02349 Eucalyptus grandis HOM05D003650 ORTHO05D004213 1.0e-79 300.4 266 56.4
Peaxi162Scf00130g00016 Petunia axillaris HOM05D003650 ORTHO05D004213 1.0e-79 300.4 269 55.8
QL07p000311 Quercus lobata HOM05D003650 ORTHO05D004213 1.0e-79 300.4 269 56.1
Carub.0004s2405 Capsella rubella HOM05D003650 ORTHO05D004213 1.8e-79 299.7 269 55.0
Thhalv10005801m.g Eutrema salsugineum HOM05D003650 ORTHO05D004213 1.8e-79 299.7 269 55.0
Gohir.D09G118400 Gossypium hirsutum HOM05D003650 ORTHO05D004213 1.8e-79 299.7 269 54.6
Nitab4.5_0005195g0070 Nicotiana tabacum HOM05D003650 ORTHO05D004213 1.8e-79 299.7 266 56.0
Nitab4.5_0010636g0040 Nicotiana tabacum HOM05D003650 ORTHO05D004213 1.8e-79 299.7 269 56.1
Hma1.2p1_2002F.1_g310720 Hydrangea macrophylla HOM05D003650 ORTHO05D004213 2.3e-79 299.3 269 55.4
Potri.016G055700 Populus trichocarpa HOM05D003650 ORTHO05D004213 2.3e-79 299.3 269 55.8
SGA_v2.0_scaffold69G23114 Striga asiatica HOM05D003650 ORTHO05D004213 2.3e-79 299.3 269 54.6
BcaNung02835 Brassica carinata HOM05D003650 ORTHO05D004213 4.0e-79 298.5 264 55.7
Carub.0005s2426 Capsella rubella HOM05D003650 ORTHO05D004213 4.0e-79 298.5 269 54.6
Lsat_1_v5_gn_9_29041 Lactuca sativa HOM05D003650 ORTHO05D004213 4.0e-79 298.5 269 54.6
Manes.08G050700 Manihot esculenta HOM05D003650 ORTHO05D004213 4.0e-79 298.5 269 56.9
GSVIVG01033278001 Vitis vinifera HOM05D003650 ORTHO05D004213 4.0e-79 298.5 263 56.7
A05p02520 Brassica napus HOM05D003650 ORTHO05D004213 5.2e-79 298.1 264 55.3
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 5.2e-79 298.1 264 55.3
Gorai.006G136600 Gossypium raimondii HOM05D003650 ORTHO05D004213 6.7e-79 297.7 269 53.9
Aa31LG1G23780 Aethionema arabicum HOM05D003650 ORTHO05D004213 8.8e-79 297.4 269 55.0
C04p02980 Brassica napus HOM05D003650 ORTHO05D004213 8.8e-79 297.4 264 54.9
BraA05t19245Z Brassica rapa HOM05D003650 ORTHO05D004213 8.8e-79 297.4 264 54.9
CARHR136860 Cardamine hirsuta HOM05D003650 ORTHO05D004213 8.8e-79 297.4 269 55.0
Sabra16G0058400 Salix brachista HOM05D003650 ORTHO05D004213 8.8e-79 297.4 269 55.4
Thecc.05G153700 Theobroma cacao HOM05D003650 ORTHO05D004213 8.8e-79 297.4 269 54.3
Duzib093G1511 Durio zibethinus HOM05D003650 ORTHO05D004213 1.5e-78 296.6 269 55.0
Migut.J01760 Erythranthe guttata HOM05D003650 ORTHO05D004213 1.5e-78 296.6 269 54.3
Gohir.A09G122200 Gossypium hirsutum HOM05D003650 ORTHO05D004213 1.5e-78 296.6 269 53.9
HanXRQChr10g0288771 Helianthus annuus HOM05D003650 ORTHO05D004213 1.5e-78 296.6 270 54.8
Potri.006G051000 Populus trichocarpa HOM05D003650 ORTHO05D004213 1.5e-78 296.6 269 55.0
Sp4g24040 Schrenkiella parvula HOM05D003650 ORTHO05D004213 1.5e-78 296.6 269 54.6
Gohir.A09G122300 Gossypium hirsutum HOM05D003650 ORTHO05D004213 2.0e-78 296.2 269 53.9
Rhsim03G0022300 Rhododendron simsii HOM05D003650 ORTHO05D004213 2.0e-78 296.2 269 53.9
CAN.G676.68 Capsicum annuum HOM05D003650 ORTHO05D004213 2.6e-78 295.8 266 57.1
Oeu008162.1 Olea europaea HOM05D003650 ORTHO05D004213 2.6e-78 295.8 269 55.8
Hund19149 Selenicereus undatus HOM05D003650 ORTHO05D004213 2.6e-78 295.8 269 55.0
Sed0014274 Sechium edule HOM05D003650 ORTHO05D004213 3.3e-78 295.4 266 55.3
AL5G38950 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 4.4e-78 295.0 269 54.6
Oeu023110.1 Olea europaea HOM05D003650 ORTHO05D004213 4.4e-78 295.0 271 55.7
Rhsim03G0021200 Rhododendron simsii HOM05D003650 ORTHO05D004213 4.4e-78 295.0 269 53.5
vmacro07855 Vaccinium macrocarpon HOM05D003650 ORTHO05D004213 4.4e-78 295.0 269 53.5
Lalb_Chr20g0110481 Lupinus albus HOM05D003650 ORTHO05D004213 5.7e-78 294.7 271 54.2
AT3G57420 Arabidopsis thaliana HOM05D003650 ORTHO05D004213 7.5e-78 294.3 269 54.3
CARHR167620 Cardamine hirsuta HOM05D003650 ORTHO05D004213 7.5e-78 294.3 269 53.9
Dinv09321 Davidia involucrata HOM05D003650 ORTHO05D004213 7.5e-78 294.3 269 56.5
CsaV3_3G039750 Cucumis sativus L. HOM05D003650 ORTHO05D004213 9.7e-78 293.9 269 55.4
ClCG10G016580 Citrullus lanatus HOM05D003650 ORTHO05D004213 1.3e-77 293.5 269 55.4
Ciclev10004391m.g Citrus clementina HOM05D003650 ORTHO05D004213 1.3e-77 293.5 269 54.6
Ah.04g151780 Amaranthus hybridus HOM05D003650 ORTHO05D004213 1.7e-77 293.1 269 54.6
MELO3C009717.2 Cucumis melo HOM05D003650 ORTHO05D004213 1.7e-77 293.1 269 55.4
Manes.09G021900 Manihot esculenta HOM05D003650 ORTHO05D004213 1.7e-77 293.1 269 55.4
Sabra06G0035700 Salix brachista HOM05D003650 ORTHO05D004213 1.7e-77 293.1 269 54.3
Duzib128G1026 Durio zibethinus HOM05D003650 ORTHO05D004213 2.2e-77 292.7 269 53.9
Prupe.2G020200 Prunus persica HOM05D003650 ORTHO05D004213 2.2e-77 292.7 269 55.4
Sp5g05180 Schrenkiella parvula HOM05D003650 ORTHO05D004213 2.8e-77 292.4 269 53.2
Lj5g0024914 Lotus japonicus HOM05D003650 ORTHO05D004213 4.8e-77 291.6 269 53.9
MD07G1018300 Malus domestica HOM05D003650 ORTHO05D004213 8.2e-77 290.8 269 54.6
Cpa.g.sc92.50 Carica papaya HOM05D003650 ORTHO05D004213 1.1e-76 290.4 269 53.2
arahy.Tifrunner.gnm1.ann1.MS35EQ Arachis hypogaea HOM05D003650 ORTHO05D004213 1.4e-76 290.0 269 54.6
Lsat_1_v5_gn_5_161461 Lactuca sativa HOM05D003650 ORTHO05D004213 1.4e-76 290.0 265 55.1
AUR62024446 Chenopodium quinoa HOM05D003650 ORTHO05D004213 1.8e-76 289.7 264 53.0
AUR62026036 Chenopodium quinoa HOM05D003650 ORTHO05D004213 1.8e-76 289.7 264 53.0
Lj2A385G21 Lonicera japonica HOM05D003650 ORTHO05D004213 1.8e-76 289.7 266 53.8
Phvul.007G252800 Phaseolus vulgaris HOM05D003650 ORTHO05D004213 1.8e-76 289.7 269 53.5
TPR.G10642 Trifolium pratense HOM05D003650 ORTHO05D004213 3.1e-76 288.9 269 53.9
arahy.Tifrunner.gnm1.ann1.YDMB1U Arachis hypogaea HOM05D003650 ORTHO05D004213 4.1e-76 288.5 269 54.3
Duzib205G0897 Durio zibethinus HOM05D003650 ORTHO05D004213 4.1e-76 288.5 269 53.9
Lalb_Chr06g0173451 Lupinus albus HOM05D003650 ORTHO05D004213 5.3e-76 288.1 269 53.5
ECA247G3671 Erigeron canadensis HOM05D003650 ORTHO05D004213 9.1e-76 287.3 269 52.0
Ca_26017_v3 Cicer arietinum L. HOM05D003650 ORTHO05D004213 1.2e-75 287.0 269 53.2
DCAR_013601 Daucus carota HOM05D003650 ORTHO05D004213 1.2e-75 287.0 269 52.4
vmacro13691 Vaccinium macrocarpon HOM05D003650 ORTHO05D004213 1.2e-75 287.0 271 54.6
VMungo0720G2955 Vigna mungo HOM05D003650 ORTHO05D004213 2.0e-75 286.2 269 52.8
Glyma.10G097600 Glycine max HOM05D003650 ORTHO05D004213 2.7e-75 285.8 269 52.8
FAN10G4002 Fragaria x ananassa HOM05D003650 ORTHO05D004213 3.5e-75 285.4 271 55.0
Cc06_g17090 Coffea canephora HOM05D003650 ORTHO05D004213 5.9e-75 284.6 259 54.8
ECA248G2213 Erigeron canadensis HOM05D003650 ORTHO05D004213 7.7e-75 284.3 266 54.1
Rhsim07G0058200 Rhododendron simsii HOM05D003650 ORTHO05D004213 1.0e-74 283.9 271 53.9
FAN06G0077 Fragaria x ananassa HOM05D003650 ORTHO05D004213 2.2e-74 282.7 271 54.2
Glyma.02G184100 Glycine max HOM05D003650 ORTHO05D004213 2.2e-74 282.7 269 52.4
FvH4_7g01460 Fragaria vesca HOM05D003650 ORTHO05D004213 2.9e-74 282.3 271 53.9
Medtr0121s0010 Medicago truncatula HOM05D003650 ORTHO05D004213 2.9e-74 282.3 269 52.4
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 2.9e-74 282.3 269 52.0
CANSAT80G2225 Cannabis sativa HOM05D003650 ORTHO05D004213 6.5e-74 281.2 269 52.4
Psat6g120000 Pisum sativum HOM05D003650 ORTHO05D004213 1.1e-73 280.4 269 51.3
CSS0035654 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 1.5e-73 280.0 271 53.5
HanXRQChr01g0008741 Helianthus annuus HOM05D003650 ORTHO05D004213 2.5e-73 279.3 268 52.2
CSS0046501 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 5.5e-73 278.1 271 53.1
Oeu027406.1 Olea europaea HOM05D003650 ORTHO05D004213 7.2e-73 277.7 263 54.0
RcHm_v2.0_Chr1g0317301 Rosa chinensis HOM05D003650 ORTHO05D004213 9.4e-73 277.3 271 54.2
ClCG09G003920 Citrullus lanatus HOM05D003650 ORTHO05D004213 1.2e-72 276.9 268 52.6
MELO3C023570.2 Cucumis melo HOM05D003650 ORTHO05D004213 2.1e-72 276.2 269 52.8
CsaV3_7G030820 Cucumis sativus L. HOM05D003650 ORTHO05D004213 2.1e-72 276.2 269 52.4
Nitab4.5_0000707g0190 Nicotiana tabacum HOM05D003650 ORTHO05D004213 6.1e-72 274.6 272 51.1
ATR0626G026 Amborella trichopoda HOM05D003650 ORTHO05D004213 8.0e-72 274.2 270 53.0
Nitab4.5_0008441g0020 Nicotiana tabacum HOM05D003650 ORTHO05D004213 1.8e-71 273.1 272 50.4
Sed0006713 Sechium edule HOM05D003650 ORTHO05D004213 1.8e-71 273.1 271 52.0
unitig_26.g9047 Utricularia gibba HOM05D003650 ORTHO05D004213 6.8e-71 271.2 273 50.2
Nn7g36273 Nelumbo nucifera HOM05D003650 ORTHO05D004213 5.7e-70 268.1 269 53.2
Peaxi162Scf00694g00117 Petunia axillaris HOM05D003650 ORTHO05D004213 5.7e-70 268.1 272 49.6
Dinv39600 Davidia involucrata HOM05D003650 ORTHO05D004213 1.3e-69 266.9 205 62.9
Cc02_g29000 Coffea canephora HOM05D003650 ORTHO05D004213 2.2e-69 266.2 269 51.3
CAN.G219.62 Capsicum annuum HOM05D003650 ORTHO05D004213 2.8e-69 265.8 272 49.6
Solyc01g087600.3 Solanum lycopersicum HOM05D003650 ORTHO05D004213 8.3e-69 264.2 272 49.6
Sopen01g034570 Solanum pennellii HOM05D003650 ORTHO05D004213 8.3e-69 264.2 272 49.6
PGSC0003DMG400006853 Solanum tuberosum HOM05D003650 ORTHO05D004213 8.3e-69 264.2 272 49.6
HPP92_010728 Vanilla planifolia HOM05D003650 ORTHO05D004213 3.5e-67 258.8 265 49.1
Zm00001eb287230 Zea mays HOM05D003650 ORTHO05D004213 1.0e-66 257.3 261 48.3
Actinidia39226 Actinidia chinensis HOM05D003650 ORTHO05D004213 5.0e-66 255.0 243 52.3
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 1.9e-65 253.1 270 48.5
Gohir.D09G118300 Gossypium hirsutum HOM05D003650 ORTHO05D004213 5.2e-63 245.0 141 78.0
SEGI_32089 Sequoiadendron giganteum HOM05D003650 ORTHO05D004213 3.4e-62 242.3 264 45.5
Atru.chr1.1095 Acer truncatum HOM05D003650 ORTHO05D004213 5.7e-62 241.5 141 75.9
Lju124C41T4 Lonicera japonica HOM05D003650 ORTHO05D004213 1.8e-60 236.5 141 75.9
Zm00001eb329540 Zea mays HOM05D003650 ORTHO05D004213 1.8e-55 219.9 262 44.3
Os07g0656400 Oryza sativa ssp. japonica HOM05D003650 ORTHO05D004213 2.4e-52 209.5 132 68.9
Mapoly0004s0304 Marchantia polymorpha HOM05D003650 ORTHO05D004213 5.4e-52 208.4 258 41.1
Pp3c14_20380 Physcomitrium patens HOM05D003650 ORTHO05D004213 3.9e-50 202.2 258 39.1
SMO329G0078 Selaginella moellendorffii HOM05D003650 ORTHO05D004213 4.3e-49 198.7 254 39.4
Pp3c17_18550 Physcomitrium patens HOM05D003650 ORTHO05D004213 5.6e-49 198.4 261 37.2
Sed0014161 Sechium edule HOM05D003650 ORTHO05D004213 1.4e-47 193.7 231 48.9
SMO165G0114 Selaginella moellendorffii HOM05D003650 ORTHO05D004213 3.7e-45 185.7 231 42.0
AL4G39860 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 2.7e-35 152.9 192 43.8
CARHR167370 Cardamine hirsuta HOM05D003650 ORTHO05D004213 1.2e-30 137.5 78 76.9
Rhsim03G0147000 Rhododendron simsii HOM05D003650 ORTHO05D004213 3.8e-21 105.9 69 71.0
Os05g0391200 Oryza sativa ssp. japonica HOM05D003650 ORTHO05D004213 2.5e-17 93.2 52 75.0
Actinidia02535 Actinidia chinensis HOM05D003650 ORTHO05D004213 3.3e-17 92.8 57 66.7
RhsimUnG0102900 Rhododendron simsii HOM05D002707 ORTHO05D002925 5.6e-17 92.0 57 73.7
GSVIVG01032164001 Vitis vinifera HOM05D003650 ORTHO05D004213 6.4e-13 78.6 39 87.2
Actinidia33702 Actinidia chinensis HOM05D003650 ORTHO05D004213 4.8e-08 62.4 50 50.0


User provided reference genes

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