Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0901 Ceratophyllum demersum HOM05D002321 ORTHO05D007292 1.0e-66 256.5 125 100.0
CDE02G1030 Ceratophyllum demersum HOM05D002321 ORTHO05D007292 9.1e-39 163.7 87 86.2
CSS0039841 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D007292 1.9e-28 129.4 83 68.7
Rhsim11G0035800 Rhododendron simsii HOM05D002321 ORTHO05D007292 3.3e-28 128.6 83 69.9
CSS0026909 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D007292 4.3e-28 128.3 85 67.1
Dinv41810 Davidia involucrata HOM05D002321 ORTHO05D007292 7.3e-28 127.5 83 67.5
AUR62010476 Chenopodium quinoa HOM05D002321 ORTHO05D007292 1.2e-27 126.7 85 67.1
AUR62030420 Chenopodium quinoa HOM05D002321 ORTHO05D007292 1.2e-27 126.7 85 67.1
Lj8A345G17 Lonicera japonica HOM05D002321 ORTHO05D007292 1.6e-27 126.3 83 66.3
PSO502G0020 Papaver somniferum HOM05D002321 ORTHO05D007292 2.8e-27 125.6 86 66.3
PSO675G6664 Papaver somniferum HOM05D002321 ORTHO05D007292 2.8e-27 125.6 86 66.3
TAR636G3608 Trochodendron aralioides HOM05D002321 ORTHO05D007292 2.8e-27 125.6 83 68.7
GSVIVG01020479001 Vitis vinifera HOM05D002321 ORTHO05D007292 4.7e-27 124.8 83 67.5
Migut.A00536 Erythranthe guttata HOM05D002321 ORTHO05D007292 1.0e-26 123.6 83 66.3
COL.COLO4_10363 Corchorus olitorius HOM05D002321 ORTHO05D007292 1.8e-26 122.9 84 65.5
Nitab4.5_0009533g0010 Nicotiana tabacum HOM05D000433 ORTHO05D000443 1.8e-26 122.9 85 67.1
vmacro00081 Vaccinium macrocarpon HOM05D002321 ORTHO05D007292 1.8e-26 122.9 83 66.3
Nn7g37396 Nelumbo nucifera HOM05D002321 ORTHO05D007292 2.3e-26 122.5 83 66.3
Peaxi162Scf00045g00729 Petunia axillaris HOM05D002321 ORTHO05D007292 2.3e-26 122.5 83 67.5
Lj8A1G34 Lonicera japonica HOM05D002321 ORTHO05D007292 3.0e-26 122.1 77 68.8
SalBow4G2419 Salvia bowleyana HOM05D002321 ORTHO05D007292 4.0e-26 121.7 83 66.3
Hund11035 Selenicereus undatus HOM05D002321 ORTHO05D007292 4.0e-26 121.7 86 59.3
CAN.G884.10 Capsicum annuum HOM05D002321 ORTHO05D007292 5.2e-26 121.3 85 67.1
PGR031G1597 Punica granatum HOM05D002321 ORTHO05D007292 5.2e-26 121.3 83 67.5
PGSC0003DMG400018482 Solanum tuberosum HOM05D002321 ORTHO05D007292 5.2e-26 121.3 86 65.1
Solyc08g005570.4 Solanum lycopersicum HOM05D002321 ORTHO05D007292 6.8e-26 120.9 86 65.1
Sopen08g001590 Solanum pennellii HOM05D002321 ORTHO05D007292 6.8e-26 120.9 86 65.1
Glyma.01G155200 Glycine max HOM05D002321 ORTHO05D007292 8.9e-26 120.6 83 63.9
ATR0568G152 Amborella trichopoda HOM05D002321 ORTHO05D007292 2.0e-25 119.4 83 62.7
Nitab4.5_0001175g0160 Nicotiana tabacum HOM05D002321 ORTHO05D007292 2.0e-25 119.4 85 64.7
CsaV3_3G020160 Cucumis sativus L. HOM05D002321 ORTHO05D007292 2.6e-25 119.0 84 61.9
Gohir.A08G149900 Gossypium hirsutum HOM05D002321 ORTHO05D007292 2.6e-25 119.0 83 65.1
Gohir.D08G171000 Gossypium hirsutum HOM05D002321 ORTHO05D007292 2.6e-25 119.0 83 65.1
QL07p000071 Quercus lobata HOM05D002321 ORTHO05D007292 2.6e-25 119.0 89 60.7
EL10Ac6g14612 Beta vulgaris HOM05D002321 ORTHO05D007292 3.4e-25 118.6 85 62.4
ClCG05G012170 Citrullus lanatus HOM05D002321 ORTHO05D007292 4.4e-25 118.2 84 61.9
MELO3C014739.2 Cucumis melo HOM05D002321 ORTHO05D007292 4.4e-25 118.2 84 61.9
Glyma.11G089500 Glycine max HOM05D002321 ORTHO05D007292 4.4e-25 118.2 85 61.2
Gorai.004G178400 Gossypium raimondii HOM05D002321 ORTHO05D007292 5.8e-25 117.9 83 63.9
VMungo1215G0605 Vigna mungo HOM05D002321 ORTHO05D007292 5.8e-25 117.9 83 62.7
Phvul.002G120300 Phaseolus vulgaris HOM05D002321 ORTHO05D007292 9.8e-25 117.1 83 62.7
QL05p088947 Quercus lobata HOM05D002321 ORTHO05D007292 9.8e-25 117.1 94 57.4
SGA_v2.0_scaffold96G29090 Striga asiatica HOM05D002321 ORTHO05D007292 2.2e-24 115.9 83 63.9
Thecc.03G318100 Theobroma cacao HOM05D002321 ORTHO05D007292 2.2e-24 115.9 83 65.1
Duzib068G1479 Durio zibethinus HOM05D002321 ORTHO05D007292 2.9e-24 115.5 83 66.3
Aa31LG9G15700 Aethionema arabicum HOM05D002321 ORTHO05D007292 3.7e-24 115.2 85 61.2
Ah.10g034370 Amaranthus hybridus HOM05D002321 ORTHO05D007292 3.7e-24 115.2 83 59.0
Carub.0005s1174 Capsella rubella HOM05D002321 ORTHO05D007292 3.7e-24 115.2 85 61.2
Haze_09515 Corylus avellana HOM05D002321 ORTHO05D007292 3.7e-24 115.2 86 59.3
Atru.chr8.2639 Acer truncatum HOM05D002321 ORTHO05D007292 4.9e-24 114.8 83 63.9
BcaB01g01050 Brassica carinata HOM05D002321 ORTHO05D007292 4.9e-24 114.8 83 62.7
BcaC01g01944 Brassica carinata HOM05D002321 ORTHO05D007292 4.9e-24 114.8 85 62.4
C03p70360 Brassica napus HOM05D002321 ORTHO05D007292 4.9e-24 114.8 85 62.4
BolC3t19290H Brassica oleracea HOM05D002321 ORTHO05D007292 4.9e-24 114.8 85 62.4
Prupe.1G352800 Prunus persica HOM05D002321 ORTHO05D007292 4.9e-24 114.8 85 61.2
RcHm_v2.0_Chr6g0304441 Rosa chinensis HOM05D002321 ORTHO05D007292 4.9e-24 114.8 83 63.9
Eucgr.D02553 Eucalyptus grandis HOM05D002321 ORTHO05D007292 6.4e-24 114.4 83 61.4
Thhalv10002446m.g Eutrema salsugineum HOM05D002321 ORTHO05D007292 6.4e-24 114.4 86 61.6
HanXRQChr03g0081051 Helianthus annuus HOM05D002321 ORTHO05D007292 6.4e-24 114.4 83 61.4
Rhsim11G0035300 Rhododendron simsii HOM05D002321 ORTHO05D007292 6.4e-24 114.4 77 67.5
Aqoxy7G00905 Aquilegia oxysepala HOM05D002321 ORTHO05D007292 8.3e-24 114.0 83 61.4
AT3G45890 Arabidopsis thaliana HOM05D002321 ORTHO05D007292 8.3e-24 114.0 85 60.0
Oeu015537.1 Olea europaea HOM05D002321 ORTHO05D007292 8.3e-24 114.0 85 60.0
CARHR154220 Cardamine hirsuta HOM05D002321 ORTHO05D007292 1.1e-23 113.6 85 60.0
CiPaw.03G266200 Carya illinoinensis HOM05D002321 ORTHO05D007292 1.1e-23 113.6 83 62.7
Ciclev10012148m.g Citrus clementina HOM05D002321 ORTHO05D007292 1.1e-23 113.6 83 63.9
Zm00001eb143370 Zea mays HOM05D002321 ORTHO05D007292 1.1e-23 113.6 83 62.7
Sp5g15650 Schrenkiella parvula HOM05D002321 ORTHO05D007292 1.4e-23 113.2 85 61.2
AL5G24570 Arabidopsis lyrata HOM05D002321 ORTHO05D007292 2.4e-23 112.5 85 58.8
DCAR_028365 Daucus carota HOM05D002321 ORTHO05D007292 2.4e-23 112.5 83 62.7
Psat2g145920 Pisum sativum HOM05D002321 ORTHO05D007292 2.4e-23 112.5 85 60.0
Atru.chr8.2642 Acer truncatum HOM05D002321 ORTHO05D007292 3.2e-23 112.1 83 62.7
A06p21190 Brassica napus HOM05D002321 ORTHO05D007292 3.2e-23 112.1 85 61.2
BraA06t25206Z Brassica rapa HOM05D002321 ORTHO05D007292 4.1e-23 111.7 85 61.2
Lsat_1_v5_gn_5_56941 Lactuca sativa HOM05D002321 ORTHO05D007292 4.1e-23 111.7 83 59.0
Sc07g0007960 Simmondsia chinensis HOM05D002321 ORTHO05D007292 4.1e-23 111.7 86 55.8
Cfa020521 Carpinus fangiana HOM05D002321 ORTHO05D007292 5.4e-23 111.3 86 58.1
ECA240G2715 Erigeron canadensis HOM05D002321 ORTHO05D007292 5.4e-23 111.3 83 59.0
Lalb_Chr16g0380301 Lupinus albus HOM05D002321 ORTHO05D007292 5.4e-23 111.3 85 58.8
FAN15G3131 Fragaria x ananassa HOM05D002321 ORTHO05D007292 7.0e-23 110.9 83 62.7
Potri.001G193300 Populus trichocarpa HOM05D002321 ORTHO05D007292 9.2e-23 110.5 84 60.7
THA.LOC104814396 Tarenaya hassleriana HOM05D002321 ORTHO05D007292 9.2e-23 110.5 83 60.2
FAN20G1652 Fragaria x ananassa HOM05D002321 ORTHO05D007292 1.6e-22 109.8 83 61.4
Lj2g0006482 Lotus japonicus HOM05D002321 ORTHO05D007292 2.0e-22 109.4 85 56.5
CANSAT01G1510 Cannabis sativa HOM05D002321 ORTHO05D007292 2.7e-22 109.0 83 60.2
Cc08_g05450 Coffea canephora HOM05D002321 ORTHO05D007292 2.7e-22 109.0 83 59.0
Manes.11G092600 Manihot esculenta HOM05D002321 ORTHO05D007292 3.5e-22 108.6 83 60.2
Psat6g117280 Pisum sativum HOM05D002321 ORTHO05D007292 3.5e-22 108.6 85 57.6
TWI32G0969 Tripterygium wilfordii HOM05D002321 ORTHO05D007292 3.5e-22 108.6 83 57.8
TPR.G5263 Trifolium pratense HOM05D002321 ORTHO05D007292 4.6e-22 108.2 83 57.8
Ca_25029_v3 Cicer arietinum L. HOM05D002321 ORTHO05D007292 6.0e-22 107.8 83 57.8
MD08G1000800 Malus domestica HOM05D002321 ORTHO05D007292 6.0e-22 107.8 83 59.0
Psat6g117360 Pisum sativum HOM05D002321 ORTHO05D007292 1.3e-21 106.7 75 61.3
Os04g0290800 Oryza sativa ssp. japonica HOM05D002321 ORTHO05D007292 1.7e-21 106.3 83 57.8
Medtr5g025160 Medicago truncatula HOM05D002321 ORTHO05D007292 2.3e-21 105.9 82 57.3
unitig_32.g11634 Utricularia gibba HOM05D002321 ORTHO05D007292 7.3e-20 100.9 84 57.1
arahy.Tifrunner.gnm1.ann1.MGL5WV Arachis hypogaea HOM05D002321 ORTHO05D007292 3.6e-19 98.6 83 53.0
arahy.Tifrunner.gnm1.ann1.RTC3FZ Arachis hypogaea HOM05D002321 ORTHO05D007292 3.6e-19 98.6 83 53.0
SHI07853 Sapria himalayana HOM05D002321 ORTHO05D007292 6.2e-19 97.8 84 51.2
EL10Ac6g14606 Beta vulgaris HOM05D002321 ORTHO05D007292 6.8e-18 94.4 85 54.1
SEGI_10212 Sequoiadendron giganteum HOM05D002321 ORTHO05D007292 2.6e-17 92.4 83 43.4
Sed0006351 Sechium edule HOM05D002321 ORTHO05D007292 4.1e-15 85.1 67 56.7
HPP92_011476 Vanilla planifolia HOM05D002321 ORTHO05D007292 7.0e-15 84.3 77 50.6
Actinidia32784 Actinidia chinensis HOM05D002321 ORTHO05D007292 3.5e-14 82.0 61 59.0
Rhsim11G0035000 Rhododendron simsii HOM05D002321 ORTHO05D007292 9.5e-12 73.9 51 62.7
CARHR154550 Cardamine hirsuta HOM05D002321 ORTHO05D007292 6.2e-11 71.2 65 52.3
Pp3c18_1720 Physcomitrium patens HOM05D002321 ORTHO05D007292 1.7e-08 63.2 83 34.9
Pp3c18_1727 Physcomitrium patens HOM05D002321 ORTHO05D007292 1.7e-08 63.2 83 34.9
AagrBONN_evm.TU.Sc2ySwM_344.4091 Anthoceros agrestis HOM05D002321 ORTHO05D007292 2.4e-07 59.3 83 31.3
Rhsim11G0036300 Rhododendron simsii HOM05D000007 ORTHO05D000039 6.0e-06 54.7 43 53.5


User provided reference genes

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