Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.6e-168 595.5 344 100.0
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.2e-114 416.4 294 79.6
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 8.1e-37 158.7 323 35.3
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 3.3e-30 136.7 305 39.3
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 8.4e-26 122.1 304 36.2
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 1.4e-25 121.3 330 39.4
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 1.6e-24 117.9 324 34.9
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 1.6e-24 117.9 333 33.3
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 2.1e-24 117.5 312 34.9
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 7.9e-24 115.5 336 33.3
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 7.9e-24 115.5 330 38.2
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 1.3e-23 114.8 308 36.0
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 3.9e-23 113.2 322 37.3
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 5.1e-23 112.8 326 34.4
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 5.1e-23 112.8 325 31.4
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 8.7e-23 112.1 320 33.8
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.5e-22 111.3 326 31.3
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 1.5e-22 111.3 328 34.8
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.9e-22 110.9 346 34.1
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 1.9e-22 110.9 331 38.1
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 3.3e-22 110.2 326 35.0
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 3.3e-22 110.2 330 37.3
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 3.3e-22 110.2 331 34.7
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 3.3e-22 110.2 324 35.5
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 4.3e-22 109.8 329 32.8
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 7.4e-22 109.0 316 37.0
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 7.4e-22 109.0 318 35.8
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 7.4e-22 109.0 254 37.4
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 9.6e-22 108.6 323 33.7
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 1.3e-21 108.2 321 32.7
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 1.6e-21 107.8 315 34.6
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 2.8e-21 107.1 334 37.4
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.8e-21 107.1 284 35.6
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 4.8e-21 106.3 315 37.5
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 4.8e-21 106.3 280 35.7
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 1.4e-20 104.8 300 34.7
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 1.8e-20 104.4 305 33.4
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 3.1e-20 103.6 324 34.3
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 4.0e-20 103.2 336 33.9
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 4.0e-20 103.2 331 33.8
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 1.2e-19 101.7 316 38.6
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 1.5e-19 101.3 321 34.6
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 2.6e-19 100.5 358 31.8
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 3.4e-19 100.1 343 33.2
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 4.5e-19 99.8 313 39.3
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 5.8e-19 99.4 295 34.2
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 5.8e-19 99.4 326 32.2
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 5.8e-19 99.4 314 35.4
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 7.6e-19 99.0 288 39.2
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 9.9e-19 98.6 232 35.3
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 1.3e-18 98.2 303 31.7
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 1.7e-18 97.8 239 35.1
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 2.9e-18 97.1 318 39.6
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 3.8e-18 96.7 325 34.8
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 3.8e-18 96.7 260 33.5
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 4.9e-18 96.3 342 32.5
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 8.4e-18 95.5 306 34.6
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 8.4e-18 95.5 198 41.4
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.1e-17 95.1 324 34.9
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 1.1e-17 95.1 313 30.0
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 1.9e-17 94.4 301 33.9
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 2.4e-17 94.0 354 36.2
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 2.4e-17 94.0 293 33.4
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 4.2e-17 93.2 281 32.7
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.6e-16 91.3 316 37.3
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 1.0e-15 88.6 324 35.5
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 1.8e-15 87.8 218 38.1
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 5.1e-15 86.3 301 38.5
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 6.7e-15 85.9 287 32.8
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 1.1e-14 85.1 176 40.9
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 1.5e-14 84.7 195 38.5
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 3.3e-14 83.6 287 34.8
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 4.3e-14 83.2 123 50.4
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 4.3e-14 83.2 322 30.1
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 1.6e-13 81.3 239 35.1
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 2.1e-13 80.9 129 43.4
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 2.8e-13 80.5 189 38.6
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 4.8e-13 79.7 375 29.6
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.1e-12 78.6 220 34.5
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.4e-12 78.2 311 36.3
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 3.1e-12 77.0 164 38.4
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 3.1e-12 77.0 334 36.2
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 3.1e-12 77.0 330 31.5
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 5.3e-12 76.3 132 43.9
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 5.8e-11 72.8 115 44.3
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 7.6e-11 72.4 333 34.2
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 7.6e-11 72.4 300 31.3
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 1.7e-10 71.2 300 38.0
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 1.7e-10 71.2 222 31.5
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 2.2e-10 70.9 105 48.6
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 2.9e-10 70.5 293 30.7
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 6.5e-10 69.3 281 36.3
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 1.4e-09 68.2 130 40.0
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 1.4e-09 68.2 130 40.0
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 1.4e-09 68.2 205 36.1
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 5.5e-09 66.2 147 39.5
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 5.5e-09 66.2 132 36.4
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 5.5e-09 66.2 198 36.9
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 7.1e-09 65.9 43 79.1
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 7.1e-09 65.9 213 31.5
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 1.2e-08 65.1 242 31.4
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 1.6e-08 64.7 130 39.2
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 1.6e-08 64.7 130 39.2
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 2.7e-08 63.9 132 39.4
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 2.7e-08 63.9 132 39.4
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 2.7e-08 63.9 132 39.4
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 3.5e-08 63.5 130 39.2
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 6.0e-08 62.8 301 35.5
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 7.9e-08 62.4 166 36.1
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 1.0e-07 62.0 132 39.4
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 1.0e-07 62.0 103 41.7
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 1.0e-07 62.0 319 25.7
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 1.3e-07 61.6 133 36.8
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.3e-07 60.8 241 27.8
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 3.0e-07 60.5 227 33.5
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 3.0e-07 60.5 205 33.2
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 5.1e-07 59.7 41 75.6
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 5.1e-07 59.7 182 34.1
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 5.1e-07 59.7 160 33.8
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 1.9e-06 57.8 196 31.1
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 1.9e-06 57.8 196 31.1
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 2.5e-06 57.4 132 37.9
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 2.5e-06 57.4 132 38.6
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 2.5e-06 57.4 132 38.6
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 7.4e-06 55.8 196 32.1
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 9.6e-06 55.5 194 31.4
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 9.6e-06 55.5 65 53.8


User provided reference genes

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