Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0846 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 1.5e-83 312.8 153 100.0
CDE05G0468 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 1.2e-51 206.8 109 91.7
MBI19_g13201_MAGBIO Magnolia biondii HOM05D006871 ORTHO05D008544 7.0e-33 144.4 110 67.3
Nn3g21461 Nelumbo nucifera HOM05D006871 ORTHO05D008544 3.5e-32 142.1 110 65.5
Dinv33046 Davidia involucrata HOM05D006871 ORTHO05D008544 8.6e-31 137.5 112 66.1
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla HOM05D006871 ORTHO05D008544 1.5e-30 136.7 114 65.8
PGR119G1195 Punica granatum HOM05D006871 ORTHO05D008544 4.3e-30 135.2 121 60.3
PGR119G1688 Punica granatum HOM05D006871 ORTHO05D008544 4.3e-30 135.2 121 60.3
Lsat_1_v5_gn_8_53460 Lactuca sativa HOM05D006871 ORTHO05D008544 1.6e-29 133.3 133 54.9
Haze_04913 Corylus avellana HOM05D006871 ORTHO05D008544 1.0e-28 130.6 145 51.0
Rhsim13G0011300 Rhododendron simsii HOM05D000121 ORTHO05D000102 1.0e-28 130.6 109 61.5
CSS0020652 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 1.4e-28 130.2 111 59.5
COL.COLO4_23360 Corchorus olitorius HOM05D006871 ORTHO05D008544 1.4e-28 130.2 114 61.4
Hund18131 Selenicereus undatus HOM05D006871 ORTHO05D008544 1.4e-28 130.2 115 60.9
Atru.chr5.1162 Acer truncatum HOM05D006871 ORTHO05D008544 1.8e-28 129.8 110 62.7
Sc05g0003970 Simmondsia chinensis HOM05D006871 ORTHO05D008544 1.8e-28 129.8 111 62.2
TWI14G0013 Tripterygium wilfordii HOM05D006871 ORTHO05D008544 1.8e-28 129.8 109 62.4
vmacro02459 Vaccinium macrocarpon HOM05D006871 ORTHO05D008544 1.8e-28 129.8 113 60.2
CSS0035923 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 2.3e-28 129.4 111 59.5
AUR62033118 Chenopodium quinoa HOM05D006871 ORTHO05D008544 3.1e-28 129.0 138 55.1
Oeu032105.1 Olea europaea HOM05D006871 ORTHO05D008544 3.1e-28 129.0 137 51.1
MSTRG.18162 Avicennia marina HOM05D006871 ORTHO05D008544 4.0e-28 128.6 110 61.8
Cfa005931 Carpinus fangiana HOM05D006871 ORTHO05D008544 4.0e-28 128.6 145 51.0
AUR62008650 Chenopodium quinoa HOM05D006871 ORTHO05D008544 4.0e-28 128.6 121 60.3
Actinidia24342 Actinidia chinensis HOM05D006871 ORTHO05D008544 1.5e-27 126.7 112 61.6
ATR0796G034 Amborella trichopoda HOM05D006871 ORTHO05D008544 2.0e-27 126.3 119 58.0
Cpa.g.sc9.224 Carica papaya HOM05D000121 ORTHO05D000102 2.0e-27 126.3 120 57.5
Lj2A1192T47 Lonicera japonica HOM05D006871 ORTHO05D008544 4.4e-27 125.2 112 61.6
SalBow3G3208 Salvia bowleyana HOM05D006871 ORTHO05D008544 4.4e-27 125.2 110 59.1
Ciclev10022428m.g Citrus clementina HOM05D006871 ORTHO05D008544 7.5e-27 124.4 110 60.9
Duzib133G1442 Durio zibethinus HOM05D006871 ORTHO05D008544 1.3e-26 123.6 114 57.9
Lalb_Chr18g0047051 Lupinus albus HOM05D006871 ORTHO05D008544 1.7e-26 123.2 115 60.0
TAR633G1007 Trochodendron aralioides HOM05D006871 ORTHO05D008544 1.7e-26 123.2 115 60.9
Gohir.A08G101400 Gossypium hirsutum HOM05D006871 ORTHO05D008544 3.7e-26 122.1 114 58.8
SGA_v2.0_scaffold1G00373 Striga asiatica HOM05D001198 ORTHO05D008544 3.7e-26 122.1 110 57.3
Gohir.D08G084900 Gossypium hirsutum HOM05D006871 ORTHO05D008544 4.9e-26 121.7 114 57.9
Gorai.004G089300 Gossypium raimondii HOM05D006871 ORTHO05D008544 4.9e-26 121.7 114 57.9
Thecc.01G298700 Theobroma cacao HOM05D006871 ORTHO05D008544 4.9e-26 121.7 114 57.9
Manes.05G063100 Manihot esculenta HOM05D006871 ORTHO05D008544 1.1e-25 120.6 112 57.1
HanXRQChr06g0163831 Helianthus annuus HOM05D006871 ORTHO05D008544 1.4e-25 120.2 134 52.2
Potri.014G130400 Populus trichocarpa HOM05D006871 ORTHO05D008544 1.9e-25 119.8 114 57.9
EL10Ac7g17459 Beta vulgaris HOM05D006871 ORTHO05D008544 3.2e-25 119.0 114 57.0
ClCG09G005940 Citrullus lanatus HOM05D006871 ORTHO05D008544 3.2e-25 119.0 114 53.5
Nitab4.5_0011307g0010 Nicotiana tabacum HOM05D006871 ORTHO05D008544 3.2e-25 119.0 114 56.1
GSVIVG01027991001 Vitis vinifera HOM05D006871 ORTHO05D008544 3.2e-25 119.0 118 56.8
Duzib138G1907 Durio zibethinus HOM05D006871 ORTHO05D008544 4.1e-25 118.6 114 55.3
CiPaw.07G107300 Carya illinoinensis HOM05D006871 ORTHO05D008544 5.4e-25 118.2 112 58.0
Cc09_g05510 Coffea canephora HOM05D006871 ORTHO05D008544 5.4e-25 118.2 111 55.9
Migut.D00207 Erythranthe guttata HOM05D006871 ORTHO05D008544 7.0e-25 117.9 113 56.6
Sabra14G0097000 Salix brachista HOM05D006871 ORTHO05D008544 7.0e-25 117.9 114 57.0
CAN.G339.16 Capsicum annuum HOM05D006871 ORTHO05D008544 9.2e-25 117.5 118 54.2
THA.LOC104815930 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 9.2e-25 117.5 115 56.5
THA.LOC104801274 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 2.0e-24 116.3 115 54.8
Aqoxy5G00741 Aquilegia oxysepala HOM05D006871 ORTHO05D008544 2.7e-24 115.9 109 56.9
DCAR_002824 Daucus carota HOM05D006871 ORTHO05D008544 2.7e-24 115.9 111 54.1
Nitab4.5_0002469g0070 Nicotiana tabacum HOM05D006871 ORTHO05D008544 2.7e-24 115.9 114 56.1
unitig_0.g659 Utricularia gibba HOM05D006871 ORTHO05D008544 2.7e-24 115.9 111 56.8
CsaV3_7G029180 Cucumis sativus L. HOM05D006871 ORTHO05D008544 3.5e-24 115.5 117 54.7
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea HOM05D006871 ORTHO05D008544 4.6e-24 115.2 112 56.2
BcaB03g15758 Brassica carinata HOM05D006871 ORTHO05D008544 4.6e-24 115.2 116 55.2
Thhalv10008837m.g Eutrema salsugineum HOM05D006871 ORTHO05D008544 4.6e-24 115.2 115 56.5
PSO210G5360 Papaver somniferum HOM05D006871 ORTHO05D008544 4.6e-24 115.2 113 58.4
PSO832G2873 Papaver somniferum HOM05D006871 ORTHO05D008544 4.6e-24 115.2 113 58.4
Aa31LG1G9720 Aethionema arabicum HOM05D006871 ORTHO05D008544 6.0e-24 114.8 115 55.7
A10p01520 Brassica napus HOM05D006871 ORTHO05D008544 6.0e-24 114.8 115 55.7
BraA10t42428Z Brassica rapa HOM05D006871 ORTHO05D008544 6.0e-24 114.8 115 55.7
Actinidia32224 Actinidia chinensis HOM05D006871 ORTHO05D008544 7.8e-24 114.4 113 55.8
Prupe.8G259900 Prunus persica HOM05D006871 ORTHO05D008544 7.8e-24 114.4 114 58.8
BcaC05g24587 Brassica carinata HOM05D006871 ORTHO05D008544 1.0e-23 114.0 115 53.9
C05p01490 Brassica napus HOM05D006871 ORTHO05D008544 1.0e-23 114.0 115 53.9
MD11G1313700 Malus domestica HOM05D006871 ORTHO05D008544 1.0e-23 114.0 116 55.2
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea HOM05D006871 ORTHO05D008544 1.3e-23 113.6 112 54.5
CARHR002210 Cardamine hirsuta HOM05D006871 ORTHO05D008544 1.3e-23 113.6 115 54.8
MELO3C016009.2 Cucumis melo HOM05D006871 ORTHO05D008544 1.3e-23 113.6 114 55.3
Eucgr.H01153 Eucalyptus grandis HOM05D006871 ORTHO05D008544 1.3e-23 113.6 128 51.6
AL1G12280 Arabidopsis lyrata HOM05D006871 ORTHO05D008544 2.3e-23 112.8 115 54.8
AT1G02870 Arabidopsis thaliana HOM05D006871 ORTHO05D008544 3.0e-23 112.5 115 53.9
BolC5t28931H Brassica oleracea HOM05D006871 ORTHO05D008544 3.0e-23 112.5 115 53.0
Carub.0001s0199 Capsella rubella HOM05D006871 ORTHO05D008544 3.9e-23 112.1 115 54.8
Sp1g01860 Schrenkiella parvula HOM05D006871 ORTHO05D008544 3.9e-23 112.1 115 54.8
Peaxi162Scf00001g00482 Petunia axillaris HOM05D006871 ORTHO05D008544 5.0e-23 111.7 111 55.0
HPP92_013720 Vanilla planifolia HOM05D006871 ORTHO05D008544 6.6e-23 111.3 118 50.8
C08p00260 Brassica napus HOM05D006871 ORTHO05D008544 8.6e-23 110.9 115 54.8
BolC8t46828H Brassica oleracea HOM05D006871 ORTHO05D008544 1.9e-22 109.8 115 53.9
QL12p027406 Quercus lobata HOM05D006871 ORTHO05D008544 1.9e-22 109.8 117 54.7
CANSAT25G1157 Cannabis sativa HOM05D006871 ORTHO05D008544 2.5e-22 109.4 117 53.0
CANSAT25G3267 Cannabis sativa HOM05D006871 ORTHO05D008544 2.5e-22 109.4 117 53.0
Solyc09g075030.3 Solanum lycopersicum HOM05D006871 ORTHO05D008544 2.5e-22 109.4 118 54.2
RcHm_v2.0_Chr6g0293791 Rosa chinensis HOM05D006871 ORTHO05D008544 5.6e-22 108.2 115 53.9
PGSC0003DMG400011375 Solanum tuberosum HOM05D006871 ORTHO05D008544 5.6e-22 108.2 117 53.8
Sopen09g029850 Solanum pennellii HOM05D006871 ORTHO05D008544 7.3e-22 107.8 118 53.4
Sed0022553 Sechium edule HOM05D006871 ORTHO05D008544 1.6e-21 106.7 116 50.9
ECA236G5112 Erigeron canadensis HOM05D006871 ORTHO05D008544 8.1e-21 104.4 112 55.4
Zm00001eb285510 Zea mays HOM05D006871 ORTHO05D008544 6.8e-20 101.3 112 52.7
CiPaw.08G096300 Carya illinoinensis HOM05D006871 ORTHO05D008544 1.5e-19 100.1 110 52.7
Os05g0367100 Oryza sativa ssp. japonica HOM05D006871 ORTHO05D008544 9.8e-19 97.4 144 41.7
FAN20G2591 Fragaria x ananassa HOM05D006871 ORTHO05D008544 7.1e-17 91.3 115 47.8
FAN27G2794 Fragaria x ananassa HOM05D006871 ORTHO05D008544 1.6e-16 90.1 115 47.0
FvH4_2g25580 Fragaria vesca HOM05D006871 ORTHO05D008544 2.7e-16 89.4 115 47.0
FAN24G1547 Fragaria x ananassa HOM05D006871 ORTHO05D008544 4.6e-16 88.6 115 46.1
Psat6g165000 Pisum sativum HOM05D006871 ORTHO05D008544 1.3e-15 87.0 110 47.3
Medtr1g088670 Medicago truncatula HOM05D006871 ORTHO05D008544 8.6e-15 84.3 110 48.2
Glyma.10G018900 Glycine max HOM05D006871 ORTHO05D008544 1.1e-14 84.0 110 44.5
Psat1g156280 Pisum sativum HOM05D006871 ORTHO05D008544 1.9e-14 83.2 110 48.2
Glyma.02G155400 Glycine max HOM05D006871 ORTHO05D008544 4.3e-14 82.0 110 44.5
VMungo0720G2524 Vigna mungo HOM05D006871 ORTHO05D008544 9.5e-14 80.9 110 45.5
Lj1g0003126 Lotus japonicus HOM05D006871 ORTHO05D008544 2.1e-13 79.7 113 46.0
Ca_10345_v3 Cicer arietinum L. HOM05D006871 ORTHO05D008544 6.2e-13 78.2 137 40.1
Phvul.007G143800 Phaseolus vulgaris HOM05D006871 ORTHO05D008544 1.1e-12 77.4 110 44.5
BcaC07g36990 Brassica carinata HOM05D006871 ORTHO05D008544 5.8e-11 71.6 69 53.6
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis HOM05D006871 ORTHO05D008544 1.3e-10 70.5 102 43.1
Pp3c25_320 Physcomitrium patens HOM05D006871 ORTHO05D008544 3.8e-10 68.9 112 42.9
RcHm_v2.0_Chr2g0134071 Rosa chinensis HOM05D006871 ORTHO05D008544 2.3e-07 59.7 60 53.3


User provided reference genes

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