Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.3e-199 699.5 346 100.0
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.7e-191 672.5 346 96.2
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 9.9e-152 540.4 359 71.9
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.7e-151 539.7 347 74.4
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.4e-150 535.8 348 75.0
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 4.2e-150 535.0 349 72.2
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 2.1e-149 532.7 349 71.3
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 1.9e-147 526.2 349 70.8
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 9.6e-147 523.9 349 71.1
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 2.1e-146 522.7 350 71.1
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 2.1e-146 522.7 349 70.2
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 3.7e-146 521.9 346 69.7
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 6.2e-146 521.2 356 69.7
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.4e-145 520.0 351 68.9
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.8e-145 519.6 350 70.0
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 1.8e-145 519.6 350 69.7
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 2.0e-144 516.2 355 69.3
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 2.0e-144 516.2 361 69.0
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 2.0e-144 516.2 354 68.9
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 2.0e-144 516.2 351 69.5
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 3.4e-144 515.4 361 68.1
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 4.5e-144 515.0 350 69.7
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 4.5e-144 515.0 350 69.4
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.3e-143 513.5 353 70.3
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 1.7e-143 513.1 348 69.0
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.7e-143 513.1 348 69.0
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 2.9e-143 512.3 354 70.1
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 3.8e-143 511.9 352 68.8
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 1.1e-142 510.4 359 68.2
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 1.6e-141 506.5 351 68.4
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 3.5e-141 505.4 353 69.4
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.0e-141 504.6 359 67.4
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 6.0e-141 504.6 353 68.0
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 1.3e-140 503.4 353 67.7
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 2.3e-140 502.7 348 67.8
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 2.3e-140 502.7 355 67.0
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 6.7e-140 501.1 346 67.9
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 8.7e-140 500.7 360 66.7
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.1e-139 500.4 357 67.2
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 1.5e-139 500.0 360 66.1
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 1.9e-139 499.6 349 69.3
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 1.9e-139 499.6 351 67.5
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 1.9e-139 499.6 351 67.5
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 4.3e-139 498.4 350 66.0
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 4.3e-139 498.4 360 65.8
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 4.3e-139 498.4 353 68.0
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 7.4e-139 497.7 355 67.0
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 9.7e-139 497.3 352 69.3
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 9.7e-139 497.3 353 67.4
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.6e-138 496.5 349 66.8
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 2.2e-138 496.1 361 65.4
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 2.2e-138 496.1 350 66.3
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.2e-138 496.1 355 66.8
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 2.2e-138 496.1 365 64.9
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 2.8e-138 495.7 355 66.2
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 2.8e-138 495.7 353 67.1
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.8e-138 495.7 355 67.3
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 3.7e-138 495.4 347 68.0
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 3.7e-138 495.4 353 65.7
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 4.8e-138 495.0 354 66.9
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.8e-138 495.0 350 66.9
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 4.8e-138 495.0 353 68.0
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.8e-138 495.0 349 66.5
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.3e-138 494.6 355 65.9
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 6.3e-138 494.6 355 66.2
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 8.2e-138 494.2 352 66.5
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 8.2e-138 494.2 342 68.7
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 8.2e-138 494.2 353 65.7
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.1e-137 493.8 361 64.8
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 1.1e-137 493.8 349 67.6
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 1.1e-137 493.8 355 66.2
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 1.8e-137 493.0 351 65.0
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.8e-137 493.0 350 67.4
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 2.4e-137 492.7 364 65.1
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 2.4e-137 492.7 352 66.8
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 2.4e-137 492.7 349 68.5
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 2.4e-137 492.7 354 66.1
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 4.1e-137 491.9 349 67.3
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 4.1e-137 491.9 349 66.5
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 6.9e-137 491.1 353 64.9
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 9.0e-137 490.7 356 66.6
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.2e-136 490.3 352 66.5
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.2e-136 490.3 352 66.8
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 1.5e-136 490.0 346 65.9
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 1.5e-136 490.0 353 64.9
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 1.5e-136 490.0 349 67.3
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 2.0e-136 489.6 353 64.9
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 6.5e-135 484.6 358 64.8
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 6.5e-135 484.6 350 66.3
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 1.1e-134 483.8 360 63.1
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 1.9e-134 483.0 355 65.4
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.5e-134 482.6 360 63.1
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 2.5e-134 482.6 358 63.4
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 7.2e-134 481.1 357 64.4
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 7.2e-134 481.1 355 63.7
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 7.2e-134 481.1 353 65.7
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 1.2e-133 480.3 363 63.4
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 2.1e-133 479.6 355 63.9
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 2.1e-133 479.6 364 62.6
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 6.1e-133 478.0 356 63.8
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 7.9e-133 477.6 393 58.8
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 7.9e-133 477.6 355 64.2
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.4e-132 476.9 346 64.5
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 3.0e-132 475.7 352 66.2
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 3.9e-132 475.3 361 62.0
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 1.1e-131 473.8 353 63.7
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 1.9e-131 473.0 358 63.1
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 9.7e-131 470.7 352 62.8
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.3e-130 470.3 353 62.9
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.7e-130 469.9 364 63.7
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.7e-130 469.9 361 62.0
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 2.2e-130 469.5 349 64.2
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 3.7e-130 468.8 355 62.3
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 8.2e-130 467.6 332 65.1
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 1.4e-129 466.8 358 63.1
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 3.1e-129 465.7 350 63.4
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.0e-128 463.0 351 63.5
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 3.4e-128 462.2 359 63.0
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 4.5e-128 461.8 357 63.0
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 5.9e-128 461.5 353 60.3
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.0e-127 460.7 348 65.5
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 2.9e-127 459.1 352 63.4
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 3.8e-127 458.8 351 62.7
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 8.5e-127 457.6 354 60.7
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 1.8e-124 449.9 350 62.0
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.8e-124 449.9 356 63.2
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 2.6e-123 446.0 348 58.6
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 5.7e-123 444.9 334 62.6
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.7e-119 433.3 287 75.3
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 8.5e-119 431.0 348 58.3
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.1e-117 426.4 303 69.6
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 2.4e-105 386.3 292 62.7
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.0e-103 380.9 351 57.8
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 5.7e-99 365.2 289 59.9
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 2.0e-96 356.7 346 53.2
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 5.5e-94 348.6 327 54.1
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.6e-93 347.1 271 63.5
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 1.4e-73 280.8 353 41.4
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 5.1e-71 272.3 211 65.9
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.1e-68 264.6 273 49.8
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 8.3e-66 255.0 241 56.0
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 1.1e-65 254.6 350 40.6
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.4e-58 228.8 156 64.7
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.9e-57 227.3 175 65.7
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 5.4e-57 225.7 356 34.3
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 5.4e-49 199.1 115 79.1
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 7.8e-48 195.3 132 67.4
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 7.3e-46 188.7 125 69.6
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 4.9e-34 149.4 157 50.3
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.2e-33 146.4 85 75.3
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.3e-33 145.2 85 75.3
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.1e-32 144.1 85 74.1
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.1e-31 139.4 85 71.8
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 4.3e-30 136.3 130 53.8
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 2.0e-27 127.5 181 40.3
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 3.4e-27 126.7 138 46.4
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 7.9e-24 115.5 186 40.9
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.3e-21 108.2 106 53.8
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 8.2e-21 105.5 58 84.5
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 8.2e-21 105.5 58 84.5
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 1.1e-20 105.1 63 79.4
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.2e-19 101.7 59 79.7
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 1.5e-19 101.3 75 61.3
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 2.6e-19 100.5 134 41.0
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 5.0e-18 96.3 60 75.0
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.4e-17 92.0 89 53.9
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 1.0e-15 88.6 55 72.7
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 2.5e-14 84.0 64 62.5
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.8e-13 79.7 37 86.5
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 3.1e-12 77.0 75 46.7
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 9.1e-12 75.5 149 27.5
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 4.5e-11 73.2 83 45.8
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.0e-10 72.0 50 66.0
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.0e-10 72.0 175 28.0
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 3.6e-08 63.5 55 54.5
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 4.7e-08 63.2 49 57.1
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 1.0e-07 62.0 64 40.6
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 1.4e-07 61.6 174 25.3
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 2.3e-07 60.8 164 25.0
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 3.9e-07 60.1 116 34.5
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 6.7e-07 59.3 49 59.2


User provided reference genes

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