Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 1.6e-100 369.4 182 100.0
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 1.2e-34 150.6 131 57.3
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 3.4e-34 149.1 121 58.7
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 9.9e-34 147.5 138 54.3
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 2.2e-33 146.4 101 67.3
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 2.2e-33 146.4 101 67.3
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 2.9e-33 146.0 158 48.1
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 3.8e-33 145.6 105 63.8
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 3.8e-33 145.6 101 65.3
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 6.4e-33 144.8 125 53.6
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 6.4e-33 144.8 101 65.3
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 8.4e-33 144.4 107 62.6
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 1.4e-32 143.7 124 56.5
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 3.2e-32 142.5 100 67.0
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 4.1e-32 142.1 108 60.2
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 5.4e-32 141.7 126 53.2
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 5.4e-32 141.7 126 53.2
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 5.4e-32 141.7 126 52.4
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 5.4e-32 141.7 126 52.4
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 9.2e-32 141.0 96 68.8
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 9.2e-32 141.0 104 64.4
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 1.2e-31 140.6 104 61.5
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 1.2e-31 140.6 108 62.0
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 1.2e-31 140.6 179 43.6
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 1.2e-31 140.6 102 63.7
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 2.1e-31 139.8 155 47.1
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 3.5e-31 139.0 96 64.6
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 3.5e-31 139.0 139 52.5
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 4.6e-31 138.7 203 41.4
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 4.6e-31 138.7 102 62.7
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 6.0e-31 138.3 102 62.7
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 6.0e-31 138.3 136 50.7
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 6.0e-31 138.3 126 54.0
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 7.8e-31 137.9 100 63.0
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 7.8e-31 137.9 128 54.7
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 7.8e-31 137.9 100 63.0
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 1.0e-30 137.5 102 60.8
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 1.0e-30 137.5 102 62.7
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 1.0e-30 137.5 124 54.0
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 1.3e-30 137.1 125 53.6
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 1.7e-30 136.7 100 62.0
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 2.3e-30 136.3 105 59.0
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 2.3e-30 136.3 96 62.5
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 3.0e-30 136.0 102 62.7
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 6.6e-30 134.8 173 45.1
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 8.6e-30 134.4 108 56.5
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 8.6e-30 134.4 181 42.0
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 8.6e-30 134.4 102 60.8
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 1.1e-29 134.0 128 50.8
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 1.1e-29 134.0 128 50.8
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 1.1e-29 134.0 128 50.8
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 1.1e-29 134.0 129 51.2
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 1.5e-29 133.7 123 53.7
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 1.9e-29 133.3 104 57.7
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 1.9e-29 133.3 102 58.8
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 2.5e-29 132.9 183 40.4
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 2.5e-29 132.9 99 60.6
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 2.5e-29 132.9 96 63.5
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 2.5e-29 132.9 102 60.8
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 2.5e-29 132.9 121 53.7
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 2.5e-29 132.9 96 62.5
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 3.3e-29 132.5 128 51.6
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 3.3e-29 132.5 128 50.8
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 3.3e-29 132.5 102 60.8
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 4.3e-29 132.1 183 40.4
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 4.3e-29 132.1 124 51.6
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 5.6e-29 131.7 189 42.3
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 5.6e-29 131.7 96 62.5
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 5.6e-29 131.7 96 60.4
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 7.3e-29 131.3 118 50.8
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 7.3e-29 131.3 128 50.0
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 9.6e-29 131.0 104 57.7
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 9.6e-29 131.0 131 51.1
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 1.2e-28 130.6 127 54.3
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 1.2e-28 130.6 152 41.4
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 6.2e-28 128.3 133 45.9
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 1.8e-27 126.7 128 46.9
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 2.4e-27 126.3 101 54.5
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 4.0e-27 125.6 183 43.2
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 5.2e-27 125.2 128 46.9
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 6.9e-27 124.8 185 38.9
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 8.9e-27 124.4 124 50.8
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 4.4e-26 122.1 103 52.4
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 1.1e-24 117.5 191 37.2
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 9.3e-24 114.4 102 53.9
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 3.0e-22 109.4 164 39.0
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 1.4e-19 100.5 74 64.9
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 5.3e-19 98.6 76 61.8
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 5.3e-19 98.6 76 61.8
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 1.2e-15 87.4 58 65.5
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 2.1e-15 86.7 159 35.8
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 6.0e-15 85.1 71 53.5
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 5.1e-14 82.0 50 66.0
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 4.3e-13 79.0 93 49.5
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 4.3e-13 79.0 62 51.6
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 2.8e-12 76.3 80 48.8
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 4.0e-11 72.4 105 40.0
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 4.5e-10 68.9 36 80.6
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 7.6e-10 68.2 44 65.9
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 3.8e-09 65.9 36 80.6
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 4.9e-09 65.5 37 78.4
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 7.1e-08 61.6 35 71.4
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 7.9e-07 58.2 111 29.7
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 3.9e-06 55.8 104 32.7


User provided reference genes

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