Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 2.0e-55 218.8 105 100.0
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 2.2e-41 172.2 101 78.2
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 3.4e-39 164.9 102 75.5
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 4.5e-39 164.5 101 75.2
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 4.5e-39 164.5 101 75.2
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.1e-37 159.8 101 75.2
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 6.1e-36 154.1 99 70.7
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 1.8e-35 152.5 101 69.3
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 2.3e-35 152.1 102 69.6
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 3.0e-35 151.8 101 69.3
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 3.0e-35 151.8 101 69.3
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 5.1e-35 151.0 101 68.3
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 5.1e-35 151.0 101 68.3
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 8.8e-35 150.2 100 70.0
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 8.8e-35 150.2 99 68.7
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.1e-34 149.8 101 69.3
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 1.1e-34 149.8 101 67.3
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.5e-34 149.4 100 70.0
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 1.5e-34 149.4 100 70.0
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 2.0e-34 149.1 102 69.6
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 2.6e-34 148.7 99 68.7
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 2.6e-34 148.7 99 69.7
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 2.6e-34 148.7 99 68.7
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 3.3e-34 148.3 101 67.3
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 3.3e-34 148.3 104 68.3
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 4.4e-34 147.9 100 69.0
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 4.4e-34 147.9 91 72.5
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 4.4e-34 147.9 91 72.5
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 4.4e-34 147.9 101 67.3
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 5.7e-34 147.5 101 68.3
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.7e-34 147.5 101 68.3
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 5.7e-34 147.5 91 74.7
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 5.7e-34 147.5 100 73.0
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 7.4e-34 147.1 101 67.3
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.7e-33 146.0 101 68.3
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 1.7e-33 146.0 100 69.0
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 2.2e-33 145.6 100 67.0
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 2.8e-33 145.2 91 72.5
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 4.8e-33 144.4 105 67.6
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 6.3e-33 144.1 101 67.3
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 8.2e-33 143.7 103 68.0
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 8.2e-33 143.7 103 66.0
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 8.2e-33 143.7 99 65.7
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 8.2e-33 143.7 101 66.3
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.1e-32 143.3 101 69.3
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.4e-32 142.9 101 66.3
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 1.4e-32 142.9 97 67.0
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 1.4e-32 142.9 97 67.0
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 1.8e-32 142.5 99 67.7
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 1.8e-32 142.5 99 63.6
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 2.4e-32 142.1 103 68.0
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 2.4e-32 142.1 91 72.5
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 3.1e-32 141.7 91 71.4
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 4.1e-32 141.4 101 63.4
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 5.3e-32 141.0 99 64.6
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 7.0e-32 140.6 97 64.9
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 7.0e-32 140.6 101 66.3
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 9.1e-32 140.2 99 63.6
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 9.1e-32 140.2 109 62.4
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 9.1e-32 140.2 92 68.5
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 9.1e-32 140.2 101 63.4
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 1.2e-31 139.8 100 67.0
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 2.0e-31 139.0 99 68.7
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 3.5e-31 138.3 100 64.0
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 3.5e-31 138.3 99 65.7
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 1.3e-30 136.3 102 62.7
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 2.2e-30 135.6 91 65.9
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 2.9e-30 135.2 97 63.9
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 2.9e-30 135.2 99 63.6
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 3.8e-30 134.8 101 66.3
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 5.0e-30 134.4 91 70.3
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 1.1e-29 133.3 99 61.6
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 1.1e-29 133.3 91 68.1
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 1.5e-29 132.9 101 65.3
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 1.9e-29 132.5 99 61.6
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 1.9e-29 132.5 97 62.9
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 2.5e-29 132.1 99 60.6
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 2.5e-29 132.1 91 67.0
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 2.5e-29 132.1 104 60.6
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 3.2e-29 131.7 99 61.6
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 5.5e-29 131.0 99 62.6
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 5.5e-29 131.0 90 66.7
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 9.4e-29 130.2 97 62.9
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.2e-28 129.8 87 67.8
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.6e-28 129.4 105 56.2
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 2.7e-28 128.6 99 60.6
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 3.6e-28 128.3 105 61.9
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 4.7e-28 127.9 101 63.4
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 1.4e-27 126.3 94 61.7
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.4e-27 126.3 91 64.8
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 1.8e-27 125.9 80 72.5
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 8.8e-27 123.6 127 50.4
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 8.8e-27 123.6 127 50.4
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 1.1e-26 123.2 94 58.5
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 2.6e-26 122.1 94 59.6
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 2.6e-26 122.1 94 59.6
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 4.4e-26 121.3 101 62.4
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 5.7e-26 120.9 91 60.4
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 9.7e-26 120.2 126 49.2
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 9.7e-26 120.2 127 49.6
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 1.7e-25 119.4 101 61.4
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 2.0e-23 112.5 105 50.5
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 1.5e-21 106.3 72 65.3
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 2.3e-19 99.0 90 55.6
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 5.2e-19 97.8 90 54.4
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 2.6e-18 95.5 61 72.1
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 4.4e-18 94.7 105 49.5
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 1.3e-17 93.2 105 48.6
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 2.8e-17 92.0 90 53.3
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 2.8e-17 92.0 90 53.3
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 2.2e-14 82.4 91 45.1
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 6.5e-14 80.9 103 47.6
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.8e-08 62.8 47 63.8
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 2.4e-08 62.4 62 48.4
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 7.7e-07 57.4 107 36.4
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.3e-06 55.8 45 53.3


User provided reference genes

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