Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0798 Ceratophyllum demersum HOM05D000140 ORTHO05D008077 2.0e-89 332.4 165 100.0
MBI01_g01259_MAGBIO Magnolia biondii HOM05D000140 ORTHO05D008077 4.9e-48 194.9 155 60.0
Hma1.2p1_0496F.1_g165850 Hydrangea macrophylla HOM05D000140 ORTHO05D008077 8.6e-45 184.1 155 56.1
HPP92_005527 Vanilla planifolia HOM05D000140 ORTHO05D008077 3.3e-44 182.2 158 55.7
TPR.G6582 Trifolium pratense HOM05D000140 ORTHO05D008077 5.6e-44 181.4 155 53.5
Aqoxy7G04010 Aquilegia oxysepala HOM05D000140 ORTHO05D008077 7.3e-44 181.0 155 54.2
PSO210G7565 Papaver somniferum HOM05D000140 ORTHO05D008077 9.5e-44 180.6 155 58.1
QL05p012092 Quercus lobata HOM05D000140 ORTHO05D008077 1.2e-43 180.3 155 55.5
Ca_01204_v3 Cicer arietinum L. HOM05D000140 ORTHO05D008077 2.8e-43 179.1 155 53.5
Dinv30373 Davidia involucrata HOM05D000140 ORTHO05D008077 3.6e-43 178.7 155 56.8
EL10Ac7g16346 Beta vulgaris HOM05D000140 ORTHO05D008077 1.1e-42 177.2 154 55.2
Psat5g292840 Pisum sativum HOM05D000140 ORTHO05D008077 1.1e-42 177.2 155 52.9
PSO210G3869 Papaver somniferum HOM05D000140 ORTHO05D008077 1.4e-42 176.8 155 58.1
TAR624G1234 Trochodendron aralioides HOM05D000140 ORTHO05D008077 1.4e-42 176.8 156 57.1
CiPaw.01G224300 Carya illinoinensis HOM05D000140 ORTHO05D008077 2.3e-42 176.0 154 53.9
Medtr2g100000 Medicago truncatula HOM05D000140 ORTHO05D008077 2.3e-42 176.0 155 52.9
Cc04_g01880 Coffea canephora HOM05D000140 ORTHO05D008077 6.8e-42 174.5 158 50.6
Solyc06g062660.4 Solanum lycopersicum HOM05D000140 ORTHO05D008077 8.9e-42 174.1 155 51.6
Sopen06g022120 Solanum pennellii HOM05D000140 ORTHO05D008077 8.9e-42 174.1 155 51.6
Cpa.g.sc25.44 Carica papaya HOM05D000140 ORTHO05D008077 1.5e-41 173.3 155 54.8
Ciclev10024990m.g Citrus clementina HOM05D000140 ORTHO05D008077 1.5e-41 173.3 155 53.5
CAN.G825.37 Capsicum annuum HOM05D000140 ORTHO05D008077 5.8e-41 171.4 155 51.6
Manes.11G025700 Manihot esculenta HOM05D000140 ORTHO05D008077 5.8e-41 171.4 155 51.0
Cfa003578 Carpinus fangiana HOM05D000140 ORTHO05D008077 7.6e-41 171.0 155 52.9
Nitab4.5_0000255g0220 Nicotiana tabacum HOM05D000140 ORTHO05D008077 9.9e-41 170.6 155 51.6
Migut.I01031 Erythranthe guttata HOM05D000140 ORTHO05D008077 1.7e-40 169.9 155 49.7
Glyma.13G349600 Glycine max HOM05D000140 ORTHO05D008077 1.7e-40 169.9 155 50.3
Nn8g38831 Nelumbo nucifera HOM05D000140 ORTHO05D008077 3.8e-40 168.7 155 53.5
Phvul.005G158700 Phaseolus vulgaris HOM05D000140 ORTHO05D008077 3.8e-40 168.7 154 51.3
Os05g0539400 Oryza sativa ssp. japonica HOM05D000140 ORTHO05D008077 4.9e-40 168.3 155 52.9
VMungo1080G0937 Vigna mungo HOM05D000140 ORTHO05D008077 4.9e-40 168.3 155 51.6
Nitab4.5_0008454g0020 Nicotiana tabacum HOM05D000140 ORTHO05D008077 8.4e-40 167.5 155 51.0
CSS0012901 Camellia sinensis var. sinensis HOM05D000140 ORTHO05D008077 1.1e-39 167.2 160 50.0
Haze_15961 Corylus avellana HOM05D000140 ORTHO05D008077 1.1e-39 167.2 155 52.9
DCAR_016153 Daucus carota HOM05D000140 ORTHO05D008077 1.1e-39 167.2 155 50.3
QL05p012111 Quercus lobata HOM05D000140 ORTHO05D008077 1.4e-39 166.8 155 51.0
Actinidia09033 Actinidia chinensis HOM05D000140 ORTHO05D008077 1.9e-39 166.4 155 51.6
Eucgr.J02852 Eucalyptus grandis HOM05D000140 ORTHO05D008077 1.9e-39 166.4 155 51.6
HanXRQChr05g0140791 Helianthus annuus HOM05D000140 ORTHO05D008077 3.2e-39 165.6 155 52.9
TWI31G0962 Tripterygium wilfordii HOM05D000140 ORTHO05D008077 3.2e-39 165.6 155 49.7
Oeu011886.1 Olea europaea HOM05D000140 ORTHO05D008077 4.1e-39 165.2 155 49.0
PGR102G2012 Punica granatum HOM05D000140 ORTHO05D008077 4.1e-39 165.2 155 51.0
Lsat_1_v5_gn_0_11160 Lactuca sativa HOM05D000140 ORTHO05D008077 7.1e-39 164.5 155 52.3
Atru.chr1.3755 Acer truncatum HOM05D000140 ORTHO05D008077 9.2e-39 164.1 158 52.5
Gohir.D05G137000 Gossypium hirsutum HOM05D000140 ORTHO05D008077 1.6e-38 163.3 156 50.6
Gorai.009G141300 Gossypium raimondii HOM05D000140 ORTHO05D008077 1.6e-38 163.3 156 50.6
SalBow6G5199 Salvia bowleyana HOM05D000140 ORTHO05D008077 1.6e-38 163.3 156 49.4
SalBow6G5580 Salvia bowleyana HOM05D000140 ORTHO05D008077 1.6e-38 163.3 156 49.4
Gohir.A05G135000 Gossypium hirsutum HOM05D000140 ORTHO05D008077 2.7e-38 162.5 156 50.6
Prupe.3G048800 Prunus persica HOM05D000140 ORTHO05D008077 4.6e-38 161.8 157 50.3
Duzib192G0008 Durio zibethinus HOM05D000140 ORTHO05D008077 6.0e-38 161.4 155 52.3
Zm00001eb294210 Zea mays HOM05D000140 ORTHO05D008077 6.0e-38 161.4 155 52.3
arahy.Tifrunner.gnm1.ann1.3G454N Arachis hypogaea HOM05D000140 ORTHO05D008077 7.8e-38 161.0 157 49.7
HanXRQChr16g0514871 Helianthus annuus HOM05D000140 ORTHO05D008077 7.8e-38 161.0 155 52.3
Rhsim12G0206500 Rhododendron simsii HOM05D001215 ORTHO05D008077 7.8e-38 161.0 155 49.7
CsaV3_3G043840 Cucumis sativus L. HOM05D000140 ORTHO05D008077 1.0e-37 160.6 157 52.2
ECA232G0751 Erigeron canadensis HOM05D000140 ORTHO05D008077 1.3e-37 160.2 156 51.9
COL.COLO4_30668 Corchorus olitorius HOM05D000140 ORTHO05D008077 1.7e-37 159.8 159 50.3
Potri.003G037000 Populus trichocarpa HOM05D000140 ORTHO05D008077 1.7e-37 159.8 155 49.0
RcHm_v2.0_Chr2g0143451 Rosa chinensis HOM05D000140 ORTHO05D008077 1.7e-37 159.8 157 49.7
Lalb_Chr24g0396441 Lupinus albus HOM05D000140 ORTHO05D008077 2.3e-37 159.5 155 47.7
Lj5A44G111 Lonicera japonica HOM05D000140 ORTHO05D008077 3.0e-37 159.1 155 48.4
Sc15g0000170 Simmondsia chinensis HOM05D000140 ORTHO05D008077 3.0e-37 159.1 155 49.0
MD09G1192500 Malus domestica HOM05D000140 ORTHO05D008077 6.6e-37 157.9 156 48.7
CANSAT56G4101 Cannabis sativa HOM05D000140 ORTHO05D008077 8.6e-37 157.5 157 50.3
FAN14G2243 Fragaria x ananassa HOM05D000140 ORTHO05D008077 1.1e-36 157.1 157 49.0
Sabra03G0023800 Salix brachista HOM05D000140 ORTHO05D008077 1.9e-36 156.4 155 48.4
Thecc.06G112300 Theobroma cacao HOM05D000140 ORTHO05D008077 2.5e-36 156.0 155 51.0
unitig_0.g871 Utricularia gibba HOM05D000140 ORTHO05D008077 2.5e-36 156.0 170 45.3
GSVIVG01016865001 Vitis vinifera HOM05D000140 ORTHO05D008077 3.3e-36 155.6 155 49.0
Atru.chr1.3737 Acer truncatum HOM05D000140 ORTHO05D008077 4.3e-36 155.2 155 51.6
FAN02G0242 Fragaria x ananassa HOM05D000140 ORTHO05D008077 4.3e-36 155.2 157 48.4
Lj3g0010439 Lotus japonicus HOM05D000140 ORTHO05D008077 5.6e-36 154.8 157 46.5
ATR0716G096 Amborella trichopoda HOM05D000140 ORTHO05D008077 7.3e-36 154.5 155 48.4
FAN05G3919 Fragaria x ananassa HOM05D000140 ORTHO05D008077 7.3e-36 154.5 157 47.8
Sed0001524 Sechium edule HOM05D000140 ORTHO05D008077 7.3e-36 154.5 157 51.6
Hund18711 Selenicereus undatus HOM05D000140 ORTHO05D008077 7.3e-36 154.5 172 46.5
ClCG07G013770 Citrullus lanatus HOM05D000140 ORTHO05D008077 9.6e-36 154.1 157 51.6
MELO3C025840.2 Cucumis melo HOM05D000140 ORTHO05D008077 1.2e-35 153.7 157 51.0
vmacro17024 Vaccinium macrocarpon HOM05D000140 ORTHO05D008077 2.8e-35 152.5 155 45.8
FAN09G3885 Fragaria x ananassa HOM05D000140 ORTHO05D008077 8.1e-35 151.0 157 47.1
Thhalv10018211m.g Eutrema salsugineum HOM05D000140 ORTHO05D008077 1.4e-34 150.2 156 46.8
Actinidia26056 Actinidia chinensis HOM05D000140 ORTHO05D008077 1.8e-34 149.8 156 48.7
AT1G72990 Arabidopsis thaliana HOM05D000140 ORTHO05D008077 2.6e-33 146.0 156 43.6
BcaC08g45680 Brassica carinata HOM05D000140 ORTHO05D008077 4.4e-33 145.2 156 44.9
C06p34430 Brassica napus HOM05D000140 ORTHO05D008077 4.4e-33 145.2 156 44.9
arahy.Tifrunner.gnm1.ann1.GQ1CY0 Arachis hypogaea HOM05D000140 ORTHO05D008077 1.7e-32 143.3 181 42.5
A07p30010 Brassica napus HOM05D000140 ORTHO05D008077 4.9e-32 141.7 156 43.6
BolC6t38553H Brassica oleracea HOM05D000140 ORTHO05D008077 4.9e-32 141.7 156 43.6
BraA07t30639Z Brassica rapa HOM05D000140 ORTHO05D008077 4.9e-32 141.7 156 43.6
BcaB03g15696 Brassica carinata HOM05D000140 ORTHO05D008077 8.4e-32 141.0 156 44.9
AL2G32740 Arabidopsis lyrata HOM05D000140 ORTHO05D008077 5.4e-31 138.3 155 42.6
THA.LOC104812215 Tarenaya hassleriana HOM05D000140 ORTHO05D008077 2.7e-30 136.0 155 45.2
Carub.0002s1975 Capsella rubella HOM05D000140 ORTHO05D008077 6.0e-30 134.8 156 42.9
Aa31LG4G3250 Aethionema arabicum HOM05D000140 ORTHO05D008077 5.1e-29 131.7 157 42.7
PGSC0003DMG400004881 Solanum tuberosum HOM05D000140 ORTHO05D008077 5.6e-28 128.3 97 57.7
GSVIVG01033176001 Vitis vinifera HOM05D001036 ORTHO05D003968 9.6e-28 127.5 137 46.0
Duzib235G0366 Durio zibethinus HOM05D000140 ORTHO05D008077 1.3e-27 127.1 138 47.8
Peaxi162Scf00207g01364 Petunia axillaris HOM05D000140 ORTHO05D008077 1.6e-27 126.7 155 40.6
FvH4_6g33540 Fragaria vesca HOM05D000140 ORTHO05D008077 8.1e-27 124.4 140 45.0
SEGI_34008 Sequoiadendron giganteum HOM05D000140 ORTHO05D008077 1.8e-26 123.2 156 44.2
Mapoly0113s0014 Marchantia polymorpha HOM05D000140 ORTHO05D008077 2.9e-24 115.9 159 40.3
SMO351G0560 Selaginella moellendorffii HOM05D000140 ORTHO05D008077 1.1e-23 114.0 154 42.9
Pp3c13_7050 Physcomitrium patens HOM05D000140 ORTHO05D008077 3.2e-23 112.5 155 42.6
Atru.chr1.3740 Acer truncatum HOM05D000140 ORTHO05D008077 1.3e-21 107.1 98 57.1
Pp3c26_2000 Physcomitrium patens HOM05D000140 ORTHO05D008077 7.4e-20 101.3 155 38.7
AUR62009830 Chenopodium quinoa HOM05D000140 ORTHO05D008077 6.4e-16 88.2 88 50.0
AUR62038142 Chenopodium quinoa HOM05D000140 ORTHO05D008077 5.8e-09 65.1 65 47.7
CARHR065960 Cardamine hirsuta HOM05D000140 ORTHO05D008077 5.5e-07 58.5 89 36.0


User provided reference genes

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