Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 3.0e-81 305.1 149 100.0
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 1.6e-58 229.6 149 71.8
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 6.4e-55 217.6 148 69.6
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 1.4e-54 216.5 149 69.1
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 1.2e-53 213.4 148 66.9
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 2.0e-53 212.6 148 65.5
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 2.0e-53 212.6 148 65.5
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 3.5e-53 211.8 148 67.6
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 3.5e-53 211.8 149 65.1
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.0e-52 210.3 144 66.7
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 1.0e-52 210.3 148 66.2
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 3.0e-52 208.8 148 64.9
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 6.6e-52 207.6 149 64.4
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 1.5e-51 206.5 172 59.9
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 1.5e-51 206.5 146 61.0
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 1.9e-51 206.1 148 65.5
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.9e-51 206.1 172 59.3
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 1.9e-51 206.1 148 66.2
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 3.3e-51 205.3 148 64.2
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 1.6e-50 203.0 148 62.2
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 2.1e-50 202.6 136 67.6
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 2.1e-50 202.6 148 64.2
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 3.6e-50 201.8 148 62.8
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 3.6e-50 201.8 148 64.2
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 6.2e-50 201.1 148 63.5
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 6.2e-50 201.1 146 65.8
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 8.0e-50 200.7 148 62.8
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 8.0e-50 200.7 148 62.8
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 1.8e-49 199.5 146 65.1
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 1.8e-49 199.5 148 63.5
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 4.0e-49 198.4 146 64.4
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 5.2e-49 198.0 148 64.2
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 6.8e-49 197.6 148 62.8
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 6.8e-49 197.6 131 71.0
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 8.9e-49 197.2 148 63.5
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 8.9e-49 197.2 148 64.2
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 8.9e-49 197.2 149 63.8
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 1.2e-48 196.8 141 63.1
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 1.5e-48 196.4 148 62.8
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 2.0e-48 196.1 148 58.8
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 2.0e-48 196.1 148 60.8
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 2.0e-48 196.1 148 62.2
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 2.0e-48 196.1 148 61.5
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 2.6e-48 195.7 148 61.5
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 3.4e-48 195.3 148 58.8
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 3.4e-48 195.3 146 66.4
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 4.4e-48 194.9 148 58.1
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 7.5e-48 194.1 148 58.8
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 7.5e-48 194.1 146 63.0
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 9.8e-48 193.7 149 62.4
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 9.8e-48 193.7 145 60.7
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 9.8e-48 193.7 168 56.5
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 1.3e-47 193.4 148 62.2
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 1.3e-47 193.4 148 60.8
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 1.3e-47 193.4 154 62.3
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 1.7e-47 193.0 148 62.2
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 1.7e-47 193.0 148 58.8
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 2.9e-47 192.2 151 59.6
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 2.9e-47 192.2 149 61.7
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 3.7e-47 191.8 146 60.3
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 3.7e-47 191.8 148 58.1
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 4.9e-47 191.4 149 57.7
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 4.9e-47 191.4 148 61.5
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 4.9e-47 191.4 148 61.5
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 4.9e-47 191.4 148 61.5
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 6.4e-47 191.0 149 57.7
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 6.4e-47 191.0 148 58.8
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 8.3e-47 190.7 148 56.8
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.1e-46 190.3 146 58.2
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 2.4e-46 189.1 148 58.8
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 3.2e-46 188.7 149 61.7
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 4.1e-46 188.3 213 47.4
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 7.0e-46 187.6 148 56.8
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 9.2e-46 187.2 146 61.0
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 9.2e-46 187.2 149 59.1
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 9.2e-46 187.2 171 55.0
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 1.6e-45 186.4 149 57.0
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 1.6e-45 186.4 149 57.0
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 1.6e-45 186.4 145 56.6
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 3.5e-45 185.3 148 56.1
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 3.5e-45 185.3 145 59.3
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 1.7e-44 183.0 186 51.1
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 2.3e-44 182.6 153 59.5
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 5.0e-44 181.4 148 54.7
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 1.9e-43 179.5 148 54.1
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 5.6e-43 177.9 142 54.9
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 2.1e-42 176.0 149 53.7
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 8.1e-42 174.1 158 54.4
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 1.8e-41 172.9 174 52.3
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 6.8e-41 171.0 147 56.5
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 1.3e-39 166.8 132 58.3
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 2.2e-39 166.0 124 61.3
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 1.4e-38 163.3 119 58.0
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 7.3e-35 151.0 111 65.8
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 2.8e-34 149.1 120 54.2
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 3.1e-33 145.6 105 62.9
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 2.7e-29 132.5 101 57.4
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 1.0e-28 130.6 147 40.1
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 1.9e-27 126.3 85 71.8
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 3.6e-26 122.1 148 45.3
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 9.9e-24 114.0 104 51.0
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 1.3e-20 103.6 153 36.6
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 3.3e-19 99.0 82 57.3
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.3e-18 97.1 65 66.2
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 4.8e-18 95.1 63 68.3
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 3.1e-17 92.4 65 67.7
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 3.4e-16 89.0 148 30.4
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 7.6e-16 87.8 70 61.4
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 1.7e-15 86.7 81 49.4
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 1.2e-13 80.5 66 54.5
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 2.7e-13 79.3 124 39.5
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 4.3e-11 72.0 65 55.4
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 9.6e-11 70.9 45 68.9
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 7.6e-08 61.2 37 70.3
Medtr2g084355 Medicago truncatula HOM05D003237 ORTHO05D003631 2.4e-06 56.2 44 63.6


User provided reference genes

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