Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0782 Ceratophyllum demersum HOM05D005649 ORTHO05D006837 7.7e-46 186.8 96 100.0
TAR629G2474 Trochodendron aralioides HOM05D005649 ORTHO05D006837 2.3e-18 95.5 96 50.0
Gohir.D09G040900 Gossypium hirsutum HOM05D005649 ORTHO05D006837 5.2e-18 94.4 93 50.5
Haze_13744 Corylus avellana HOM05D005649 ORTHO05D006837 3.4e-17 91.7 82 54.9
Aqoxy7G00428 Aquilegia oxysepala HOM05D005649 ORTHO05D006837 1.3e-16 89.7 93 48.4
Potri.015G139100 Populus trichocarpa HOM05D005649 ORTHO05D006837 1.7e-16 89.4 87 50.6
HPP92_025495 Vanilla planifolia HOM05D005649 ORTHO05D006837 4.9e-16 87.8 92 50.0
Sabra15G0150200 Salix brachista HOM05D005649 ORTHO05D006837 6.4e-16 87.4 84 52.4
Atru.chr1.509 Acer truncatum HOM05D005649 ORTHO05D006837 1.1e-15 86.7 89 48.3
Duzib068G0970 Durio zibethinus HOM05D005649 ORTHO05D006837 1.4e-15 86.3 66 56.1
Potri.012G137400 Populus trichocarpa HOM05D005649 ORTHO05D006837 1.9e-15 85.9 93 47.3
CSS0017664 Camellia sinensis var. sinensis HOM05D005649 ORTHO05D006837 3.2e-15 85.1 90 48.9
Gohir.A11G009800 Gossypium hirsutum HOM05D005649 ORTHO05D006837 4.1e-15 84.7 83 53.0
Gohir.D11G009100 Gossypium hirsutum HOM05D005649 ORTHO05D006837 4.1e-15 84.7 83 53.0
Gorai.007G010700 Gossypium raimondii HOM05D005649 ORTHO05D006837 4.1e-15 84.7 83 53.0
Dinv35188 Davidia involucrata HOM05D005649 ORTHO05D006837 5.4e-15 84.3 90 44.4
PSO478G4859 Papaver somniferum HOM05D005649 ORTHO05D006837 1.6e-14 82.8 70 48.6
THA.LOC109117151 Tarenaya hassleriana HOM05D005649 ORTHO05D006837 1.6e-14 82.8 74 51.4
HPP92_025369 Vanilla planifolia HOM05D005649 ORTHO05D006837 1.6e-14 82.8 79 51.9
Nn1g01375 Nelumbo nucifera HOM05D005649 ORTHO05D006837 2.1e-14 82.4 67 59.7
Ciclev10006307m.g Citrus clementina HOM05D005649 ORTHO05D006837 2.7e-14 82.0 92 43.5
MELO3C006883.2 Cucumis melo HOM05D005649 ORTHO05D006837 3.5e-14 81.6 94 43.6
CsaV3_3G016880 Cucumis sativus L. HOM05D005649 ORTHO05D006837 4.6e-14 81.3 94 42.6
Prupe.2G290900 Prunus persica HOM05D005649 ORTHO05D006837 4.6e-14 81.3 85 47.1
CiPaw.04G066700 Carya illinoinensis HOM05D005649 ORTHO05D006837 1.0e-13 80.1 94 47.9
Oeu062770.1 Olea europaea HOM05D005649 ORTHO05D006837 1.0e-13 80.1 100 43.0
COL.COLO4_14273 Corchorus olitorius HOM05D005649 ORTHO05D006837 1.3e-13 79.7 94 47.9
PSO782G3448 Papaver somniferum HOM05D005649 ORTHO05D006837 1.3e-13 79.7 94 44.7
Phvul.004G120100 Phaseolus vulgaris HOM05D005649 ORTHO05D006837 1.3e-13 79.7 84 44.0
CiPaw.03G103300 Carya illinoinensis HOM05D005649 ORTHO05D006837 1.7e-13 79.3 97 44.3
Sc13g0008480 Simmondsia chinensis HOM05D005649 ORTHO05D006837 2.3e-13 79.0 90 43.3
Actinidia03109 Actinidia chinensis HOM05D005649 ORTHO05D006837 3.0e-13 78.6 87 46.0
Duzib084G1193 Durio zibethinus HOM05D005649 ORTHO05D006837 3.9e-13 78.2 97 41.2
AT5G52160 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 5.1e-13 77.8 88 39.8
EL10Ac3g05710 Beta vulgaris HOM05D005649 ORTHO05D006837 5.1e-13 77.8 88 45.5
Nn8g41026 Nelumbo nucifera HOM05D005649 ORTHO05D006837 5.1e-13 77.8 95 43.2
Thecc.03G171600 Theobroma cacao HOM05D005649 ORTHO05D006837 5.1e-13 77.8 98 43.9
AUR62021224 Chenopodium quinoa HOM05D005649 ORTHO05D006837 6.6e-13 77.4 93 39.8
Medtr1g101360 Medicago truncatula HOM05D005649 ORTHO05D006837 8.6e-13 77.0 81 48.1
SalBow2G3129 Salvia bowleyana HOM05D005649 ORTHO05D006837 8.6e-13 77.0 75 48.0
Hma1.2p1_1323F.1_g275520 Hydrangea macrophylla HOM05D005649 ORTHO05D006837 1.1e-12 76.6 91 40.7
PSO782G2995 Papaver somniferum HOM05D005649 ORTHO05D006837 1.1e-12 76.6 96 42.7
PGR042G0682 Punica granatum HOM05D005649 ORTHO05D006837 1.1e-12 76.6 86 47.7
CANSAT21G0877 Cannabis sativa HOM05D005649 ORTHO05D006837 1.9e-12 75.9 83 41.0
Sed0025700 Sechium edule HOM05D005649 ORTHO05D006837 1.9e-12 75.9 92 45.7
A03p15810 Brassica napus HOM05D005649 ORTHO05D006837 2.5e-12 75.5 79 43.0
Lsat_1_v5_gn_2_132960 Lactuca sativa HOM05D005649 ORTHO05D006837 2.5e-12 75.5 75 46.7
Lalb_Chr01g0009161 Lupinus albus HOM05D005649 ORTHO05D006837 3.3e-12 75.1 91 47.3
BcaB01g04189 Brassica carinata HOM05D005649 ORTHO05D006837 4.3e-12 74.7 88 42.0
Gohir.A12G260100 Gossypium hirsutum HOM05D005649 ORTHO05D006837 4.3e-12 74.7 84 42.9
Gohir.D12G260900 Gossypium hirsutum HOM05D005649 ORTHO05D006837 4.3e-12 74.7 84 42.9
Gorai.008G279600 Gossypium raimondii HOM05D005649 ORTHO05D006837 4.3e-12 74.7 84 42.9
Sp6g14410 Schrenkiella parvula HOM05D005649 ORTHO05D006837 4.3e-12 74.7 79 41.8
AL8G26550 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 5.6e-12 74.3 88 39.8
BraA03t10871Z Brassica rapa HOM05D005649 ORTHO05D006837 5.6e-12 74.3 88 42.0
CARHR265080 Cardamine hirsuta HOM05D005649 ORTHO05D006837 5.6e-12 74.3 75 45.3
Psat0s6119g0040 Pisum sativum HOM05D005649 ORTHO05D006837 5.6e-12 74.3 83 45.8
TWI63G0636 Tripterygium wilfordii HOM05D005649 ORTHO05D006837 5.6e-12 74.3 85 44.7
Ah.07g209060 Amaranthus hybridus HOM05D005649 ORTHO05D006837 7.3e-12 73.9 89 43.8
BcaC01g06166 Brassica carinata HOM05D005649 ORTHO05D006837 7.3e-12 73.9 88 42.0
BcaC01g06170 Brassica carinata HOM05D005649 ORTHO05D006837 7.3e-12 73.9 88 42.0
C03p18480 Brassica napus HOM05D005649 ORTHO05D006837 7.3e-12 73.9 71 46.5
BolC3t14245H Brassica oleracea HOM05D005649 ORTHO05D006837 7.3e-12 73.9 88 42.0
CAN.G28.8 Capsicum annuum HOM05D005649 ORTHO05D006837 7.3e-12 73.9 92 40.2
Sp6g35660 Schrenkiella parvula HOM05D005649 ORTHO05D006837 7.3e-12 73.9 93 37.6
Glyma.09G144000 Glycine max HOM05D005649 ORTHO05D006837 9.6e-12 73.6 89 46.1
AUR62016019 Chenopodium quinoa HOM05D005649 ORTHO05D006837 1.2e-11 73.2 91 38.5
MD01G1197500 Malus domestica HOM05D005649 ORTHO05D006837 1.2e-11 73.2 83 41.0
SalBow6G0552 Salvia bowleyana HOM05D000001 ORTHO05D010467 1.2e-11 73.2 82 42.7
C09p41580 Brassica napus HOM05D005649 ORTHO05D006837 1.6e-11 72.8 79 40.5
CAN.G769.4 Capsicum annuum HOM05D005649 ORTHO05D006837 1.6e-11 72.8 61 50.8
Migut.F00365 Erythranthe guttata HOM05D005649 ORTHO05D006837 1.6e-11 72.8 94 41.5
SalBow6G6599 Salvia bowleyana HOM05D000001 ORTHO05D010467 1.6e-11 72.8 82 41.5
ATR0757G068 Amborella trichopoda HOM05D005649 ORTHO05D006837 2.1e-11 72.4 80 42.5
BolC9t57041H Brassica oleracea HOM05D005649 ORTHO05D006837 2.1e-11 72.4 77 41.6
Migut.F01138 Erythranthe guttata HOM05D005649 ORTHO05D006837 2.1e-11 72.4 86 44.2
Sed0000609 Sechium edule HOM05D005649 ORTHO05D006837 2.1e-11 72.4 84 42.9
Solyc06g035820.1 Solanum lycopersicum HOM05D005649 ORTHO05D006837 2.1e-11 72.4 92 34.8
Thhalv10015126m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 2.8e-11 72.0 93 37.6
TPR.G17428 Trifolium pratense HOM05D005649 ORTHO05D006837 2.8e-11 72.0 94 43.6
HanXRQChr14g0462161 Helianthus annuus HOM05D005649 ORTHO05D006837 3.6e-11 71.6 80 46.2
Lalb_Chr19g0130991 Lupinus albus HOM05D005649 ORTHO05D006837 3.6e-11 71.6 96 44.8
Carub.0008s1225 Capsella rubella HOM05D005649 ORTHO05D006837 4.7e-11 71.2 66 47.0
Actinidia34088 Actinidia chinensis HOM05D005649 ORTHO05D006837 6.2e-11 70.9 70 45.7
PSO782G4359 Papaver somniferum HOM05D005649 ORTHO05D006837 6.2e-11 70.9 93 43.0
Aa31LG3G8540 Aethionema arabicum HOM05D005649 ORTHO05D006837 8.1e-11 70.5 89 39.3
DCAR_014595 Daucus carota HOM05D005649 ORTHO05D006837 8.1e-11 70.5 64 42.2
Thhalv10005193m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 8.1e-11 70.5 93 41.9
A10p09850 Brassica napus HOM05D005649 ORTHO05D006837 1.1e-10 70.1 79 39.2
BraA10t43066Z Brassica rapa HOM05D005649 ORTHO05D006837 1.1e-10 70.1 79 39.2
Eucgr.K00231 Eucalyptus grandis HOM05D005649 ORTHO05D006837 1.1e-10 70.1 92 39.1
Nitab4.5_0002107g0070 Nicotiana tabacum HOM05D005649 ORTHO05D006837 1.1e-10 70.1 90 38.9
Peaxi162Scf00040g00425 Petunia axillaris HOM05D005649 ORTHO05D006837 1.1e-10 70.1 94 40.4
Thhalv10015124m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 1.8e-10 69.3 66 47.0
Glyma.16G197100 Glycine max HOM05D005649 ORTHO05D006837 1.8e-10 69.3 90 40.0
Solyc03g026115.1 Solanum lycopersicum HOM05D005649 ORTHO05D006837 1.8e-10 69.3 93 43.0
PGSC0003DMG400004517 Solanum tuberosum HOM05D000087 ORTHO05D000439 1.8e-10 69.3 71 42.3
CARHR205910 Cardamine hirsuta HOM05D005649 ORTHO05D006837 3.1e-10 68.6 80 41.2
CARHR275870 Cardamine hirsuta HOM05D005649 ORTHO05D006837 3.1e-10 68.6 93 38.7
DCAR_018179 Daucus carota HOM05D005649 ORTHO05D006837 3.1e-10 68.6 89 40.4
AL6G17460 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 5.2e-10 67.8 82 41.5
Cc02_g03310 Coffea canephora HOM05D005649 ORTHO05D006837 5.2e-10 67.8 96 41.7
Manes.14G028300 Manihot esculenta HOM05D005649 ORTHO05D006837 5.2e-10 67.8 85 45.9
Carub.0008s2276 Capsella rubella HOM05D005649 ORTHO05D006837 8.9e-10 67.0 93 38.7
RcHm_v2.0_Chr1g0376811 Rosa chinensis HOM05D005649 ORTHO05D006837 8.9e-10 67.0 92 41.3
C09p69350 Brassica napus HOM05D005649 ORTHO05D006837 1.5e-09 66.2 93 34.4
BolC9t59679H Brassica oleracea HOM05D005649 ORTHO05D006837 1.5e-09 66.2 93 34.4
DCAR_018177 Daucus carota HOM05D005649 ORTHO05D006837 1.5e-09 66.2 88 40.9
Nitab4.5_0004480g0060 Nicotiana tabacum HOM05D005649 ORTHO05D006837 1.5e-09 66.2 92 39.1
TAR636G3290 Trochodendron aralioides HOM05D000087 ORTHO05D000439 1.5e-09 66.2 79 43.0
BcaB08g35564 Brassica carinata HOM05D005649 ORTHO05D006837 2.0e-09 65.9 65 43.1
Carub.0006s0617 Capsella rubella HOM05D005649 ORTHO05D006837 2.0e-09 65.9 69 42.0
A10p28990 Brassica napus HOM05D005649 ORTHO05D006837 2.6e-09 65.5 93 33.3
BraA10t44947Z Brassica rapa HOM05D005649 ORTHO05D006837 2.6e-09 65.5 93 33.3
Solyc01g009590.3 Solanum lycopersicum HOM05D005649 ORTHO05D006837 2.6e-09 65.5 65 41.5
Sopen01g005120 Solanum pennellii HOM05D005649 ORTHO05D006837 2.6e-09 65.5 65 41.5
Cpa.g.sc107.18 Carica papaya HOM05D005649 ORTHO05D006837 3.4e-09 65.1 89 40.4
Ca_10790_v3 Cicer arietinum L. HOM05D005649 ORTHO05D006837 3.4e-09 65.1 95 42.1
FvH4_7g29091 Fragaria vesca HOM05D005649 ORTHO05D006837 3.4e-09 65.1 95 35.8
FAN03G0279 Fragaria x ananassa HOM05D005649 ORTHO05D006837 3.4e-09 65.1 95 35.8
Os08g0546300 Oryza sativa ssp. japonica HOM05D005649 ORTHO05D006837 3.4e-09 65.1 63 47.6
AL8G38860 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 4.4e-09 64.7 93 39.8
Peaxi162Scf00132g01516 Petunia axillaris HOM05D005649 ORTHO05D006837 4.4e-09 64.7 83 43.4
Lj2g0004156 Lotus japonicus HOM05D005649 ORTHO05D006837 5.8e-09 64.3 67 44.8
BcaC06g32460 Brassica carinata HOM05D005649 ORTHO05D006837 1.7e-08 62.8 80 35.0
CAN.G166.5 Capsicum annuum HOM05D005649 ORTHO05D006837 2.2e-08 62.4 90 36.7
AT5G07230 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 2.9e-08 62.0 73 39.7
SGA_v2.0_scaffold10G05368 Striga asiatica HOM05D005649 ORTHO05D006837 3.8e-08 61.6 92 40.2
AT5G62080 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 8.4e-08 60.5 95 38.9
SEGI_28530 Sequoiadendron giganteum HOM05D005649 ORTHO05D006837 8.4e-08 60.5 64 39.1
Sp2g25250 Schrenkiella parvula HOM05D005649 ORTHO05D006837 1.1e-07 60.1 92 37.0
Zm00001eb198610 Zea mays HOM05D005649 ORTHO05D006837 1.4e-07 59.7 78 43.6
Aa31LG2G14300 Aethionema arabicum HOM05D005649 ORTHO05D006837 1.9e-07 59.3 78 29.5
FAN03G1726 Fragaria x ananassa HOM05D005649 ORTHO05D006837 4.2e-07 58.2 52 48.1


User provided reference genes

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