Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 5.2e-193 677.6 347 100.0
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 3.0e-124 449.1 325 73.5
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 3.0e-124 449.1 329 73.6
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 9.7e-123 444.1 325 72.3
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 4.8e-122 441.8 328 71.3
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 2.4e-121 439.5 323 72.4
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 3.1e-121 439.1 323 72.4
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 4.1e-121 438.7 321 71.7
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 5.3e-121 438.3 322 72.0
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 7.0e-121 438.0 323 73.1
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 9.1e-121 437.6 327 71.6
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 1.6e-120 436.8 327 71.6
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 2.0e-120 436.4 325 71.4
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 2.6e-120 436.0 327 71.3
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 5.9e-120 434.9 317 71.6
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 7.7e-120 434.5 324 71.0
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 7.7e-120 434.5 321 70.7
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 1.0e-119 434.1 299 75.6
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 1.0e-119 434.1 322 70.8
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.3e-119 433.7 321 71.3
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 1.3e-119 433.7 322 70.2
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 1.3e-119 433.7 315 71.7
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 1.3e-119 433.7 322 71.1
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.9e-119 432.6 318 73.6
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 6.5e-119 431.4 325 70.2
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 8.5e-119 431.0 321 70.7
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.5e-118 430.3 316 70.9
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.5e-118 430.3 332 68.1
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 1.9e-118 429.9 325 69.2
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 2.5e-118 429.5 328 69.2
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.2e-117 427.2 316 70.3
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.2e-117 427.2 325 68.6
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 1.2e-117 427.2 274 77.7
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 2.1e-117 426.4 325 68.6
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 4.7e-117 425.2 327 69.4
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.4e-116 423.7 327 69.1
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 1.8e-116 423.3 324 69.8
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 2.3e-116 422.9 327 68.5
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 3.0e-116 422.5 325 69.8
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 4.0e-116 422.2 321 68.8
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 4.0e-116 422.2 321 68.8
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 5.2e-116 421.8 323 68.1
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 5.2e-116 421.8 325 70.2
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 6.8e-116 421.4 323 70.0
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 6.8e-116 421.4 327 68.5
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 8.8e-116 421.0 276 76.1
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 1.2e-115 420.6 321 68.8
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 1.5e-115 420.2 331 68.3
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 2.6e-115 419.5 318 68.9
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 2.6e-115 419.5 329 69.0
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 3.4e-115 419.1 329 67.5
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 5.7e-115 418.3 326 66.9
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 7.5e-115 417.9 272 75.4
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 9.7e-115 417.5 284 73.2
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 2.2e-114 416.4 323 67.5
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 2.8e-114 416.0 318 68.6
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 3.7e-114 415.6 322 69.3
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 6.3e-114 414.8 270 75.9
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 1.1e-113 414.1 317 69.4
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 1.8e-113 413.3 278 73.7
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 4.1e-113 412.1 314 67.5
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 1.2e-112 410.6 321 68.8
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 1.2e-112 410.6 279 73.5
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 1.2e-112 410.6 279 73.5
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 1.2e-112 410.6 279 73.5
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 1.2e-112 410.6 319 69.3
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 1.2e-112 410.6 308 69.2
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 1.6e-112 410.2 321 69.2
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 1.6e-112 410.2 279 73.5
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 2.0e-112 409.8 279 73.5
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 3.5e-112 409.1 319 68.7
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 3.5e-112 409.1 308 69.2
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 1.0e-111 407.5 319 68.0
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 2.2e-111 406.4 279 72.0
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 2.2e-111 406.4 275 74.2
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 2.2e-111 406.4 275 74.2
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 3.8e-111 405.6 307 69.7
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 2.5e-110 402.9 341 64.2
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 4.2e-110 402.1 320 65.9
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 1.6e-109 400.2 320 66.9
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 4.0e-108 395.6 308 68.2
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.2e-107 394.0 326 64.7
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.5e-107 393.7 324 65.1
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.0e-107 393.3 256 75.8
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 2.2e-106 389.8 304 66.4
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 2.0e-104 383.3 323 64.1
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 2.7e-104 382.9 234 79.5
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 2.7e-104 382.9 234 79.5
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 1.5e-102 377.1 241 76.8
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 2.1e-101 373.2 315 64.8
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 2.3e-100 369.8 320 63.1
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 5.2e-100 368.6 327 65.1
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 6.8e-100 368.2 229 79.5
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 3.4e-99 365.9 329 61.4
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 4.4e-99 365.5 282 67.0
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 9.8e-99 364.4 226 78.8
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 3.7e-98 362.5 274 65.7
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 3.2e-97 359.4 326 61.0
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 9.2e-97 357.8 320 60.3
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 5.0e-95 352.1 267 65.2
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 2.8e-93 346.3 207 80.7
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 1.4e-92 344.0 320 58.1
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 1.2e-91 340.9 331 58.3
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 3.9e-87 325.9 264 62.5
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 4.0e-84 315.8 325 55.7
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 1.2e-83 314.3 262 59.9
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 4.9e-82 308.9 250 62.4
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 1.4e-73 280.8 278 55.0
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 1.4e-65 254.2 230 62.6
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 8.7e-63 245.0 309 47.2
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 7.6e-59 231.9 197 64.0
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 6.0e-56 222.2 232 51.7
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.7e-55 220.7 246 50.4
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 4.5e-51 206.1 150 71.3
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 3.7e-37 159.8 104 69.2
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 9.7e-22 108.6 69 73.9
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 2.2e-18 97.4 87 56.3
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 9.4e-09 65.5 46 63.0
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 2.7e-08 63.9 64 59.4
Ca_29372_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 3.3e-06 57.0 129 30.2


User provided reference genes

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