Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0730 Ceratophyllum demersum HOM05D007127 ORTHO05D008803 1.4e-113 412.9 206 100.0
Hma1.2p1_0193F.1_g083963 Hydrangea macrophylla HOM05D007127 ORTHO05D008803 2.7e-35 152.9 122 65.6
GSVIVG01014748001 Vitis vinifera HOM05D007127 ORTHO05D008803 5.0e-34 148.7 134 61.2
Dinv40887 Davidia involucrata HOM05D003312 ORTHO05D003792 1.6e-32 143.7 126 61.1
MBI14_g43080_MAGBIO Magnolia biondii HOM05D007127 ORTHO05D008803 1.6e-32 143.7 113 64.6
Lj8A180T97 Lonicera japonica HOM05D007127 ORTHO05D008803 3.6e-32 142.5 110 69.1
Solyc10g005870.4 Solanum lycopersicum HOM05D007127 ORTHO05D008803 3.6e-32 142.5 125 60.8
ECA246G1683 Erigeron canadensis HOM05D007127 ORTHO05D008803 8.0e-32 141.4 107 67.3
Potri.001G467100 Populus trichocarpa HOM05D007127 ORTHO05D008803 8.0e-32 141.4 103 68.9
Eucgr.F03672 Eucalyptus grandis HOM05D007127 ORTHO05D008803 1.0e-31 141.0 135 58.5
Sopen10g001820 Solanum pennellii HOM05D007127 ORTHO05D008803 1.8e-31 140.2 125 59.2
TAR627G0858 Trochodendron aralioides HOM05D007127 ORTHO05D008803 2.3e-31 139.8 132 57.6
CAN.G492.47 Capsicum annuum HOM05D007127 ORTHO05D008803 4.0e-31 139.0 82 80.5
HanXRQChr08g0232691 Helianthus annuus HOM05D007127 ORTHO05D008803 4.0e-31 139.0 126 57.1
Oeu005465.2 Olea europaea HOM05D007127 ORTHO05D008803 4.0e-31 139.0 125 58.4
Peaxi162Scf00339g00004 Petunia axillaris HOM05D007127 ORTHO05D008803 5.2e-31 138.7 108 63.9
PGR031G3625 Punica granatum HOM05D007127 ORTHO05D008803 8.9e-31 137.9 107 66.4
Sabra16G0317000 Salix brachista HOM05D007127 ORTHO05D008803 8.9e-31 137.9 82 78.0
Nn1g07579 Nelumbo nucifera HOM05D007127 ORTHO05D008803 1.5e-30 137.1 82 78.0
THA.LOC104811685 Tarenaya hassleriana HOM05D007127 ORTHO05D008803 1.5e-30 137.1 105 63.8
Ca_14836_v3 Cicer arietinum L. HOM05D007127 ORTHO05D008803 2.6e-30 136.3 93 68.8
CARHR234140 Cardamine hirsuta HOM05D007127 ORTHO05D008803 3.4e-30 136.0 109 62.4
Ciclev10009425m.g Citrus clementina HOM05D007127 ORTHO05D008803 3.4e-30 136.0 83 74.7
Duzib213G0866 Durio zibethinus HOM05D007127 ORTHO05D008803 4.4e-30 135.6 130 56.9
Gohir.D01G078500 Gossypium hirsutum HOM05D007127 ORTHO05D008803 4.4e-30 135.6 142 53.5
vmacro11616 Vaccinium macrocarpon HOM05D007127 ORTHO05D008803 4.4e-30 135.6 76 80.3
Aqoxy1G04096 Aquilegia oxysepala HOM05D007127 ORTHO05D008803 5.7e-30 135.2 78 80.8
Gorai.002G103100 Gossypium raimondii HOM05D007127 ORTHO05D008803 5.7e-30 135.2 142 53.5
DCAR_013258 Daucus carota HOM05D007127 ORTHO05D008803 7.5e-30 134.8 125 56.0
ATR0751G120 Amborella trichopoda HOM05D007127 ORTHO05D008803 9.8e-30 134.4 87 73.6
Carub.0007s1432 Capsella rubella HOM05D007127 ORTHO05D008803 9.8e-30 134.4 114 57.9
Migut.M01626 Erythranthe guttata HOM05D007127 ORTHO05D008803 9.8e-30 134.4 80 77.5
Gohir.A01G094000 Gossypium hirsutum HOM05D007127 ORTHO05D008803 9.8e-30 134.4 141 52.5
Lalb_Chr15g0082331 Lupinus albus HOM05D007127 ORTHO05D008803 1.3e-29 134.0 129 56.6
CANSAT11G1343 Cannabis sativa HOM05D007127 ORTHO05D008803 1.7e-29 133.7 80 75.0
Lsat_1_v5_gn_5_2120 Lactuca sativa HOM05D007127 ORTHO05D008803 2.2e-29 133.3 114 58.8
QL08p002654 Quercus lobata HOM05D007127 ORTHO05D008803 2.2e-29 133.3 115 55.7
FAN25G0358 Fragaria x ananassa HOM05D007127 ORTHO05D008803 2.8e-29 132.9 99 65.7
MD03G1036700 Malus domestica HOM05D007127 ORTHO05D008803 2.8e-29 132.9 82 75.6
PGSC0003DMG400014371 Solanum tuberosum HOM05D007127 ORTHO05D008803 3.7e-29 132.5 140 53.6
AL7G26340 Arabidopsis lyrata HOM05D007127 ORTHO05D008803 4.9e-29 132.1 109 59.6
AT4G26555 Arabidopsis thaliana HOM05D007127 ORTHO05D008803 4.9e-29 132.1 108 60.2
Prupe.6G028700 Prunus persica HOM05D007127 ORTHO05D008803 4.9e-29 132.1 92 68.5
Thecc.07G007600 Theobroma cacao HOM05D007127 ORTHO05D008803 6.3e-29 131.7 135 48.9
Aa31LG5G11910 Aethionema arabicum HOM05D007127 ORTHO05D008803 8.3e-29 131.3 80 73.8
FAN16G2471 Fragaria x ananassa HOM05D007127 ORTHO05D008803 8.3e-29 131.3 97 67.0
C07p55280 Brassica napus HOM05D007127 ORTHO05D008803 1.1e-28 131.0 109 60.6
Os02g0199300 Oryza sativa ssp. japonica HOM05D007127 ORTHO05D008803 1.1e-28 131.0 89 65.2
A03p56780 Brassica napus HOM05D000491 ORTHO05D008803 1.4e-28 130.6 109 59.6
PSO210G6734 Papaver somniferum HOM05D007127 ORTHO05D008803 1.4e-28 130.6 123 54.5
RcHm_v2.0_Chr5g0075531 Rosa chinensis HOM05D007127 ORTHO05D008803 1.4e-28 130.6 99 63.6
MSTRG.7016 Avicennia marina HOM05D007127 ORTHO05D008803 2.4e-28 129.8 80 73.8
Lj6g0006308 Lotus japonicus HOM05D007127 ORTHO05D008803 2.4e-28 129.8 93 67.7
Sp7g24510 Schrenkiella parvula HOM05D007127 ORTHO05D008803 2.4e-28 129.8 109 60.6
BcaC06g32738 Brassica carinata HOM05D007127 ORTHO05D008803 3.1e-28 129.4 108 60.2
BolC7t45986H Brassica oleracea HOM05D000491 ORTHO05D000359 3.1e-28 129.4 108 60.2
Thhalv10026261m.g Eutrema salsugineum HOM05D007127 ORTHO05D008803 3.1e-28 129.4 109 62.4
FAN16G1842 Fragaria x ananassa HOM05D000097 ORTHO05D008803 3.1e-28 129.4 78 76.9
HPP92_021913 Vanilla planifolia HOM05D007127 ORTHO05D008803 3.1e-28 129.4 78 74.4
BraA03t14746Z Brassica rapa HOM05D000491 ORTHO05D000359 4.1e-28 129.0 108 59.3
Rhsim06G0232700 Rhododendron simsii HOM05D007127 ORTHO05D008803 5.4e-28 128.6 127 52.8
Cc05_g15330 Coffea canephora HOM05D007127 ORTHO05D008803 7.0e-28 128.3 106 63.2
Glyma.18G074000 Glycine max HOM05D007127 ORTHO05D008803 9.2e-28 127.9 93 66.7
SGA_v2.0_scaffold171G38842 Striga asiatica HOM05D007127 ORTHO05D008803 1.2e-27 127.5 121 55.4
CsaV3_7G023830 Cucumis sativus L. HOM05D007127 ORTHO05D008803 1.6e-27 127.1 108 58.3
Actinidia30375 Actinidia chinensis HOM05D007127 ORTHO05D008803 2.7e-27 126.3 72 80.6
arahy.Tifrunner.gnm1.ann1.I2ZJD2 Arachis hypogaea HOM05D007127 ORTHO05D008803 3.5e-27 125.9 93 65.6
Hma1.2p1_0193F.1_g083966 Hydrangea macrophylla HOM05D007127 ORTHO05D008803 4.5e-27 125.6 65 90.8
TPR.G17936 Trifolium pratense HOM05D007127 ORTHO05D008803 5.9e-27 125.2 91 65.9
SEGI_17483 Sequoiadendron giganteum HOM05D007127 ORTHO05D008803 1.0e-26 124.4 78 71.8
SalBow8G4011 Salvia bowleyana HOM05D007127 ORTHO05D008803 1.3e-26 124.0 161 44.7
Zm00001eb205840 Zea mays HOM05D007127 ORTHO05D008803 1.3e-26 124.0 122 54.1
TWI39G0351 Tripterygium wilfordii HOM05D007127 ORTHO05D008803 1.7e-26 123.6 143 46.2
Atru.BG.133.p Acer truncatum HOM05D007127 ORTHO05D008803 2.3e-26 123.2 69 79.7
EL10Ac4g07544 Beta vulgaris HOM05D007127 ORTHO05D008803 2.3e-26 123.2 82 72.0
AUR62017126 Chenopodium quinoa HOM05D007127 ORTHO05D008803 2.3e-26 123.2 125 52.8
Cpa.g.sc12.104 Carica papaya HOM05D007127 ORTHO05D008803 2.9e-26 122.9 69 79.7
AUR62035684 Chenopodium quinoa HOM05D007127 ORTHO05D008803 1.1e-25 120.9 70 80.0
Medtr3g060750 Medicago truncatula HOM05D007127 ORTHO05D008803 3.3e-25 119.4 91 64.8
ClCG09G021550 Citrullus lanatus HOM05D007127 ORTHO05D008803 4.3e-25 119.0 103 56.3
SalBow1G6811 Salvia bowleyana HOM05D007127 ORTHO05D008803 7.3e-25 118.2 134 49.3
CiPaw.11G207200 Carya illinoinensis HOM05D007127 ORTHO05D008803 1.6e-24 117.1 118 51.7
COL.COLO4_07744 Corchorus olitorius HOM05D007127 ORTHO05D008803 1.6e-24 117.1 65 81.5
Haze_09871 Corylus avellana HOM05D007127 ORTHO05D008803 8.0e-24 114.8 124 51.6
FvH4_3g42230 Fragaria vesca HOM05D007127 ORTHO05D008803 1.2e-22 110.9 84 65.5
Glyma.08G333000 Glycine max HOM05D007127 ORTHO05D008803 1.2e-22 110.9 73 72.6
Cfa021894 Carpinus fangiana HOM05D007127 ORTHO05D008803 1.5e-22 110.5 105 52.4
Manes.09G155700 Manihot esculenta HOM05D007127 ORTHO05D008803 9.8e-22 107.8 63 77.8
FAN11G0992 Fragaria x ananassa HOM05D007127 ORTHO05D008803 3.7e-21 105.9 82 64.6
AagrBONN_evm.TU.Sc2ySwM_368.1220 Anthoceros agrestis HOM05D007127 ORTHO05D008803 4.9e-21 105.5 78 60.3
RcHm_v2.0_Chr5g0075491 Rosa chinensis HOM05D007127 ORTHO05D008803 4.9e-21 105.5 73 69.9
Nitab4.5_0001622g0030 Nicotiana tabacum HOM05D007127 ORTHO05D008803 1.1e-20 104.4 110 54.5
Actinidia10571 Actinidia chinensis HOM05D007127 ORTHO05D008803 5.4e-20 102.1 120 46.7
Pp3c5_10020 Physcomitrium patens HOM05D007127 ORTHO05D008803 1.2e-19 100.9 78 55.1
Hund01879 Selenicereus undatus HOM05D007127 ORTHO05D008803 1.0e-18 97.8 82 61.0
SMO356G0109 Selaginella moellendorffii HOM05D007127 ORTHO05D008803 4.3e-17 92.4 69 58.0
arahy.Tifrunner.gnm1.ann1.SL03ST Arachis hypogaea HOM05D007127 ORTHO05D008803 6.2e-16 88.6 117 42.7
Medtr3g060790 Medicago truncatula HOM05D007127 ORTHO05D008803 1.3e-13 80.9 54 64.8
Medtr3g060760 Medicago truncatula HOM05D007127 ORTHO05D008803 2.4e-12 76.6 61 57.4
Zm00001eb416620 Zea mays HOM05D000723 ORTHO05D008803 1.7e-10 70.5 85 42.4
Cre07.g315700 Chlamydomonas reinhardtii HOM05D007127 ORTHO05D008803 2.3e-10 70.1 94 38.3
Phvul.006G059272 Phaseolus vulgaris HOM05D007127 ORTHO05D008803 5.0e-10 68.9 56 57.1
VMungo0540G0661 Vigna mungo HOM05D007127 ORTHO05D008803 8.1e-08 61.6 96 41.7
RcHm_v2.0_Chr5g0075521 Rosa chinensis HOM05D007127 ORTHO05D008803 1.4e-07 60.8 41 68.3
MCO15G274 Micromonas commoda HOM05D007127 ORTHO05D008803 9.9e-06 54.7 133 27.8


User provided reference genes

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