Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0634 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 1.4e-187 659.4 334 100.0
CDE05G0725 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 4.5e-93 345.5 200 88.5
TAR362G0369 Trochodendron aralioides HOM05D005143 ORTHO05D006404 8.6e-60 235.0 247 51.0
CDE05G1990 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 1.1e-57 228.0 214 59.8
PSO210G3751 Papaver somniferum HOM05D005143 ORTHO05D006404 4.0e-57 226.1 235 51.9
PSO761G0512 Papaver somniferum HOM05D005143 ORTHO05D006404 6.8e-57 225.3 235 51.5
QL06p011304 Quercus lobata HOM05D005143 ORTHO05D006404 7.6e-56 221.9 232 51.3
Actinidia15583 Actinidia chinensis HOM05D005143 ORTHO05D006404 1.1e-54 218.0 236 48.7
Glyma.09G039500 Glycine max HOM05D005143 ORTHO05D006404 7.1e-54 215.3 233 49.4
Hma1.2p1_0013F.1_g008930 Hydrangea macrophylla HOM05D005143 ORTHO05D006404 1.2e-53 214.5 236 47.5
Cfa015478 Carpinus fangiana HOM05D005143 ORTHO05D006404 1.6e-53 214.2 232 50.0
VMungo1309G2864 Vigna mungo HOM05D005143 ORTHO05D006404 4.6e-53 212.6 232 49.6
Nn3g21616 Nelumbo nucifera HOM05D005143 ORTHO05D006404 6.0e-53 212.2 250 49.6
Lalb_Chr20g0121021 Lupinus albus HOM05D005143 ORTHO05D006404 7.8e-53 211.8 234 47.9
RcHm_v2.0_Chr4g0424271 Rosa chinensis HOM05D005143 ORTHO05D006404 1.0e-52 211.5 231 50.2
Haze_01089 Corylus avellana HOM05D005143 ORTHO05D006404 1.3e-52 211.1 227 50.7
Ca_01881_v3 Cicer arietinum L. HOM05D005143 ORTHO05D006404 6.6e-52 208.8 232 47.0
Ca_01895_v3 Cicer arietinum L. HOM05D005143 ORTHO05D006404 6.6e-52 208.8 232 47.0
vmacro08077 Vaccinium macrocarpon HOM05D005143 ORTHO05D006404 6.6e-52 208.8 235 48.1
Dinv02072 Davidia involucrata HOM05D005143 ORTHO05D006404 8.6e-52 208.4 231 46.3
Medtr2g034880 Medicago truncatula HOM05D005143 ORTHO05D006404 8.6e-52 208.4 234 47.4
Actinidia40351 Actinidia chinensis HOM05D005143 ORTHO05D006404 1.1e-51 208.0 254 44.9
Ciclev10007083m.g Citrus clementina HOM05D005143 ORTHO05D006404 1.5e-51 207.6 233 47.6
Lj6A685T16 Lonicera japonica HOM05D005143 ORTHO05D006404 1.9e-51 207.2 235 47.7
TPR.G27704 Trifolium pratense HOM05D005143 ORTHO05D006404 1.9e-51 207.2 232 47.4
CiPaw.01G142400 Carya illinoinensis HOM05D005143 ORTHO05D006404 2.5e-51 206.8 255 45.5
ClCG05G006400 Citrullus lanatus HOM05D005143 ORTHO05D006404 3.3e-51 206.5 232 48.3
Glyma.15G144700 Glycine max HOM05D005143 ORTHO05D006404 3.3e-51 206.5 233 48.5
FvH4_4g19280 Fragaria vesca HOM05D005143 ORTHO05D006404 4.3e-51 206.1 231 48.9
Psat1g158200 Pisum sativum HOM05D005143 ORTHO05D006404 4.3e-51 206.1 232 48.3
GSVIVG01035046001 Vitis vinifera HOM05D005143 ORTHO05D006404 7.3e-51 205.3 236 46.2
FAN12G3988 Fragaria x ananassa HOM05D005143 ORTHO05D006404 9.6e-51 204.9 231 48.9
Lj6g0005650 Lotus japonicus HOM05D005143 ORTHO05D006404 1.2e-50 204.5 232 47.8
Lalb_Chr18g0058921 Lupinus albus HOM05D005143 ORTHO05D006404 1.2e-50 204.5 237 48.1
Dinv44320 Davidia involucrata HOM05D005143 ORTHO05D006404 1.6e-50 204.1 231 45.9
COL.COLO4_34676 Corchorus olitorius HOM05D005143 ORTHO05D006404 3.6e-50 203.0 239 45.6
Thecc.04G294800 Theobroma cacao HOM05D005143 ORTHO05D006404 3.6e-50 203.0 242 46.7
PGR031G1222 Punica granatum HOM05D005143 ORTHO05D006404 4.7e-50 202.6 241 44.4
CsaV3_3G015020 Cucumis sativus L. HOM05D005143 ORTHO05D006404 8.1e-50 201.8 233 47.2
Manes.15G007000 Manihot esculenta HOM05D005143 ORTHO05D006404 8.1e-50 201.8 241 45.2
EL10Ac3g04926 Beta vulgaris HOM05D005143 ORTHO05D006404 1.1e-49 201.4 256 44.5
CSS0004405 Camellia sinensis var. sinensis HOM05D005143 ORTHO05D006404 1.1e-49 201.4 231 47.6
Aqoxy2G02819 Aquilegia oxysepala HOM05D005143 ORTHO05D006404 1.4e-49 201.1 238 47.5
Potri.010G140400 Populus trichocarpa HOM05D005143 ORTHO05D006404 1.4e-49 201.1 235 45.5
Prupe.1G125800 Prunus persica HOM05D005143 ORTHO05D006404 1.4e-49 201.1 233 47.6
arahy.Tifrunner.gnm1.ann1.UTG064 Arachis hypogaea HOM05D005143 ORTHO05D006404 1.8e-49 200.7 237 46.4
Phvul.009G253600 Phaseolus vulgaris HOM05D005143 ORTHO05D006404 1.8e-49 200.7 232 47.8
DCAR_002501 Daucus carota HOM05D005143 ORTHO05D006404 2.4e-49 200.3 231 48.9
DCAR_030483 Daucus carota HOM05D005143 ORTHO05D006404 3.1e-49 199.9 241 44.0
Glyma.17G031200 Glycine max HOM05D005143 ORTHO05D006404 3.1e-49 199.9 243 45.7
TWI09G1317 Tripterygium wilfordii HOM05D005143 ORTHO05D006404 6.9e-49 198.7 230 47.8
Potri.008G108900 Populus trichocarpa HOM05D005143 ORTHO05D006404 8.9e-49 198.4 235 46.0
Potri.T170901 Populus trichocarpa HOM05D005143 ORTHO05D006404 8.9e-49 198.4 235 46.0
Sed0010751 Sechium edule HOM05D005143 ORTHO05D006404 8.9e-49 198.4 236 45.8
MELO3C006698.2 Cucumis melo HOM05D005143 ORTHO05D006404 2.0e-48 197.2 233 45.9
Sabra10G0108500 Salix brachista HOM05D005143 ORTHO05D006404 3.4e-48 196.4 234 44.4
Gorai.011G195900 Gossypium raimondii HOM05D005143 ORTHO05D006404 4.4e-48 196.1 242 44.6
Cc03_g01170 Coffea canephora HOM05D005143 ORTHO05D006404 7.6e-48 195.3 238 47.1
FAN07G0192 Fragaria x ananassa HOM05D005143 ORTHO05D006404 7.6e-48 195.3 209 52.2
Sabra08G0082500 Salix brachista HOM05D005143 ORTHO05D006404 9.9e-48 194.9 230 45.2
Eucgr.A00195 Eucalyptus grandis HOM05D005143 ORTHO05D006404 1.3e-47 194.5 257 43.6
Medtr2g034890 Medicago truncatula HOM05D005143 ORTHO05D006404 1.3e-47 194.5 232 45.7
Phvul.003G110600 Phaseolus vulgaris HOM05D005143 ORTHO05D006404 1.7e-47 194.1 227 47.6
Duzib151G0017 Durio zibethinus HOM05D005143 ORTHO05D006404 2.2e-47 193.7 235 45.1
Gohir.A10G168900 Gossypium hirsutum HOM05D005143 ORTHO05D006404 2.9e-47 193.4 235 44.7
Gohir.D10G175100 Gossypium hirsutum HOM05D005143 ORTHO05D006404 2.9e-47 193.4 235 44.7
CAN.G1016.6 Capsicum annuum HOM05D005143 ORTHO05D006404 3.8e-47 193.0 232 48.7
Lsat_1_v5_gn_6_115260 Lactuca sativa HOM05D005143 ORTHO05D006404 4.9e-47 192.6 236 43.2
Sopen01g026590 Solanum pennellii HOM05D005143 ORTHO05D006404 4.9e-47 192.6 232 47.8
PGSC0003DMG400014988 Solanum tuberosum HOM05D005143 ORTHO05D006404 6.4e-47 192.2 232 48.3
Oeu016479.2 Olea europaea HOM05D005143 ORTHO05D006404 8.4e-47 191.8 231 46.3
MSTRG.21781 Avicennia marina HOM05D005143 ORTHO05D006404 1.4e-46 191.0 237 46.0
MBI19_g29991_MAGBIO Magnolia biondii HOM05D005143 ORTHO05D006404 3.2e-46 189.9 242 41.7
Cpa.g.sc9.99 Carica papaya HOM05D005143 ORTHO05D006404 4.2e-46 189.5 239 43.9
Ah.04g154920 Amaranthus hybridus HOM05D005143 ORTHO05D006404 5.4e-46 189.1 246 43.1
Duzib052G1152 Durio zibethinus HOM05D005143 ORTHO05D006404 9.3e-46 188.3 232 44.0
Solyc01g060450.3 Solanum lycopersicum HOM05D005143 ORTHO05D006404 9.3e-46 188.3 232 47.4
MD16G1159000 Malus domestica HOM05D005143 ORTHO05D006404 2.7e-45 186.8 231 46.3
Atru.chr4.2951 Acer truncatum HOM05D005143 ORTHO05D006404 3.5e-45 186.4 230 47.8
MD13G1158800 Malus domestica HOM05D005143 ORTHO05D006404 3.5e-45 186.4 232 46.1
Nitab4.5_0000169g0050 Nicotiana tabacum HOM05D005143 ORTHO05D006404 3.5e-45 186.4 232 47.4
CiPaw.02G077100 Carya illinoinensis HOM05D005143 ORTHO05D006404 4.6e-45 186.0 235 44.3
AUR62035066 Chenopodium quinoa HOM05D005143 ORTHO05D006404 4.6e-45 186.0 223 46.2
Sp2g19670 Schrenkiella parvula HOM05D005143 ORTHO05D006404 7.8e-45 185.3 234 44.0
BcaB07g34148 Brassica carinata HOM05D005143 ORTHO05D006404 1.7e-44 184.1 239 43.5
A02p38010 Brassica napus HOM05D005143 ORTHO05D006404 1.7e-44 184.1 239 43.9
BraA02t08785Z Brassica rapa HOM05D005143 ORTHO05D006404 1.7e-44 184.1 239 43.9
Sc25g0003440 Simmondsia chinensis HOM05D005143 ORTHO05D006404 1.7e-44 184.1 246 43.1
BcaC03g17714 Brassica carinata HOM05D005143 ORTHO05D006404 3.9e-44 183.0 239 43.9
BolC2t11792H Brassica oleracea HOM05D005143 ORTHO05D006404 3.9e-44 183.0 239 43.9
Nitab4.5_0001695g0020 Nicotiana tabacum HOM05D005143 ORTHO05D006404 3.9e-44 183.0 232 46.6
VMungo1215G3234 Vigna mungo HOM05D005143 ORTHO05D006404 3.9e-44 183.0 227 45.8
Thhalv10005363m.g Eutrema salsugineum HOM05D005143 ORTHO05D006404 5.1e-44 182.6 239 43.1
THA.LOC104818896 Tarenaya hassleriana HOM05D005143 ORTHO05D006404 6.6e-44 182.2 240 40.4
C02p57210 Brassica napus HOM05D005143 ORTHO05D006404 8.7e-44 181.8 239 43.5
CARHR182240 Cardamine hirsuta HOM05D005143 ORTHO05D006404 1.1e-43 181.4 239 43.1
AL8G22960 Arabidopsis lyrata HOM05D005143 ORTHO05D006404 1.9e-43 180.6 239 43.1
C07p39840 Brassica napus HOM05D005143 ORTHO05D006404 1.9e-43 180.6 239 43.5
Carub.0008s0919 Capsella rubella HOM05D005143 ORTHO05D006404 1.9e-43 180.6 234 44.0
Migut.N00060 Erythranthe guttata HOM05D005143 ORTHO05D006404 2.5e-43 180.3 241 42.7
BolC7t44512H Brassica oleracea HOM05D005143 ORTHO05D006404 5.6e-43 179.1 239 43.1
Aa31LG11G7840 Aethionema arabicum HOM05D005143 ORTHO05D006404 7.3e-43 178.7 239 42.3
AT5G49320 Arabidopsis thaliana HOM05D005143 ORTHO05D006404 1.6e-42 177.6 239 42.7
SGA_v2.0_scaffold119G32680 Striga asiatica HOM05D005143 ORTHO05D006404 2.8e-42 176.8 231 42.9
SalBow5G4838 Salvia bowleyana HOM05D005143 ORTHO05D006404 3.6e-42 176.4 231 42.0
ECA246G2788 Erigeron canadensis HOM05D005143 ORTHO05D006404 4.8e-42 176.0 241 40.7
BcaNung02596 Brassica carinata HOM05D005143 ORTHO05D006404 8.1e-42 175.3 239 43.1
Lalb_Chr12g0200981 Lupinus albus HOM05D005143 ORTHO05D006404 3.1e-41 173.3 211 45.5
Sabra08G0082600 Salix brachista HOM05D005143 ORTHO05D006404 5.3e-41 172.6 246 41.1
Hund02954 Selenicereus undatus HOM05D005143 ORTHO05D006404 6.9e-41 172.2 258 40.7
TPR.G27702 Trifolium pratense HOM05D005143 ORTHO05D006404 4.5e-40 169.5 232 44.4
CANSAT78G1129 Cannabis sativa HOM05D005143 ORTHO05D006404 2.2e-39 167.2 230 41.3
HanXRQChr03g0093441 Helianthus annuus HOM05D005143 ORTHO05D006404 2.2e-39 167.2 239 41.4
Peaxi162Scf00065g00033 Petunia axillaris HOM05D005143 ORTHO05D006404 2.4e-38 163.7 232 41.4
arahy.Tifrunner.gnm1.ann1.W9GTE1 Arachis hypogaea HOM05D005143 ORTHO05D006404 1.2e-37 161.4 221 42.5
HPP92_001064 Vanilla planifolia HOM05D005143 ORTHO05D006404 1.6e-37 161.0 240 41.2
arahy.Tifrunner.gnm1.ann1.RF9CFS Arachis hypogaea HOM05D005143 ORTHO05D006404 2.7e-37 160.2 221 42.5
arahy.Tifrunner.gnm1.ann1.PXPP98 Arachis hypogaea HOM05D005143 ORTHO05D006404 7.4e-35 152.1 182 45.1
Rhsim04G0232200 Rhododendron simsii HOM05D005143 ORTHO05D006404 7.4e-35 152.1 237 40.1
Zm00001eb127640 Zea mays HOM05D005143 ORTHO05D006404 3.6e-34 149.8 218 40.4
TAR633G2465 Trochodendron aralioides HOM05D005143 ORTHO05D006404 2.4e-33 147.1 163 45.4
SGA_v2.0_scaffold91G28048 Striga asiatica HOM05D005143 ORTHO05D006404 4.0e-33 146.4 231 41.6
FAN12G2949 Fragaria x ananassa HOM05D005143 ORTHO05D006404 2.6e-32 143.7 180 45.6
ATR0706G251 Amborella trichopoda HOM05D005143 ORTHO05D006404 1.7e-31 141.0 204 39.7
Os01g0253400 Oryza sativa ssp. japonica HOM05D005143 ORTHO05D006404 3.2e-30 136.7 223 37.2
SEGI_27691 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 9.3e-30 135.2 227 33.9
AagrBONN_evm.TU.Sc2ySwM_368.1032 Anthoceros agrestis HOM05D005143 ORTHO05D006404 3.0e-28 130.2 237 38.0
SEGI_03781 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 8.7e-28 128.6 227 32.6
SEGI_36016 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 1.5e-27 127.9 229 32.8
Carub.0008s0727 Capsella rubella HOM05D005143 ORTHO05D006404 4.9e-23 112.8 174 42.0
AUR62043573 Chenopodium quinoa HOM05D005143 ORTHO05D006404 7.9e-21 105.5 152 42.8
Oeu006437.1 Olea europaea HOM05D005143 ORTHO05D006404 6.7e-20 102.4 140 43.6
Nitab4.5_0008735g0010 Nicotiana tabacum HOM05D005143 ORTHO05D006404 1.1e-17 95.1 200 39.5
Nitab4.5_0000531g0070 Nicotiana tabacum HOM05D005143 ORTHO05D006404 3.1e-17 93.6 200 38.0
AUR62016151 Chenopodium quinoa HOM05D005143 ORTHO05D006404 6.9e-17 92.4 144 42.4
Hund11951 Selenicereus undatus HOM05D005143 ORTHO05D006404 2.6e-16 90.5 139 38.1
Nitab4.5_0005463g0090 Nicotiana tabacum HOM05D005143 ORTHO05D006404 4.5e-16 89.7 165 41.2
Lj3C827T17 Lonicera japonica HOM05D005143 ORTHO05D006404 1.1e-06 58.5 91 36.3
SMO118G0365 Selaginella moellendorffii HOM05D005143 ORTHO05D006404 5.5e-06 56.2 146 34.2


User provided reference genes

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