Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 2.2e-137 492.3 246 100.0
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 4.0e-123 444.9 246 90.2
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 3.1e-67 259.2 284 53.2
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 2.3e-65 253.1 289 53.6
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 5.6e-64 248.4 283 54.1
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 3.0e-62 242.7 269 54.6
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 4.0e-62 242.3 269 55.0
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 4.0e-62 242.3 272 54.0
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 7.5e-61 238.0 276 51.8
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.7e-60 235.7 266 52.6
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 6.4e-60 235.0 269 53.9
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 8.3e-60 234.6 268 53.4
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 1.1e-59 234.2 269 53.9
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 1.4e-59 233.8 275 54.2
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 1.4e-59 233.8 270 53.7
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 1.4e-59 233.8 261 55.2
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 3.2e-59 232.6 274 52.9
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 7.0e-59 231.5 279 52.7
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 2.7e-58 229.6 273 52.7
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 4.6e-58 228.8 262 52.3
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 5.9e-58 228.4 280 50.4
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 2.3e-57 226.5 265 54.0
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 3.0e-57 226.1 274 54.7
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 5.0e-57 225.3 267 52.1
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 1.1e-56 224.2 258 53.1
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 3.3e-56 222.6 267 54.3
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 7.3e-56 221.5 259 53.7
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 9.5e-56 221.1 264 52.3
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 1.6e-55 220.3 273 50.9
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 2.1e-55 219.9 278 51.4
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 2.1e-55 219.9 266 52.6
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 2.8e-55 219.5 257 52.9
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 3.6e-55 219.2 270 50.4
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 3.6e-55 219.2 273 50.5
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 1.8e-54 216.9 277 52.7
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 4.0e-54 215.7 277 52.0
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 5.2e-54 215.3 273 48.7
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 5.2e-54 215.3 302 48.3
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 5.2e-54 215.3 277 52.3
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 1.5e-53 213.8 270 50.0
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 6.4e-52 208.4 275 52.4
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 1.1e-51 207.6 265 50.2
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 1.1e-51 207.6 267 53.9
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.4e-51 207.2 277 51.3
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 1.6e-50 203.8 277 51.6
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 6.0e-50 201.8 229 53.3
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 7.8e-50 201.4 280 45.7
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.3e-49 200.7 272 47.4
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 1.7e-49 200.3 272 47.4
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.7e-49 200.3 272 47.4
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 3.0e-49 199.5 251 50.2
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 3.9e-49 199.1 260 50.8
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 3.9e-49 199.1 261 51.7
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 5.0e-49 198.7 272 47.4
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 5.0e-49 198.7 263 49.0
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 6.6e-49 198.4 283 48.4
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 8.6e-49 198.0 280 48.2
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 1.5e-48 197.2 269 48.3
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 1.9e-48 196.8 261 51.3
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 2.5e-48 196.4 263 50.2
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 3.3e-48 196.1 273 46.9
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 3.3e-48 196.1 264 50.4
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 5.6e-48 195.3 258 52.3
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 5.6e-48 195.3 273 46.5
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 1.6e-47 193.7 291 47.8
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 2.1e-47 193.4 261 51.3
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 2.8e-47 193.0 282 47.2
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 4.7e-47 192.2 295 48.1
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 4.7e-47 192.2 267 47.9
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 4.7e-47 192.2 222 54.1
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.3e-46 189.9 270 46.7
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 6.8e-46 188.3 264 50.4
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 6.8e-46 188.3 262 49.2
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.0e-45 186.8 274 47.8
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 2.9e-44 183.0 267 46.8
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 4.9e-44 182.2 275 47.3
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 6.4e-44 181.8 258 49.2
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 8.3e-44 181.4 292 44.2
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 2.4e-43 179.9 200 57.5
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 9.2e-43 177.9 258 49.6
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 9.2e-43 177.9 281 45.6
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 1.2e-42 177.6 283 44.2
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 4.6e-42 175.6 272 46.0
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 3.9e-41 172.6 257 48.2
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 3.3e-40 169.5 242 49.2
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 9.5e-40 167.9 242 47.9
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 9.5e-40 167.9 249 47.0
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 1.2e-39 167.5 263 44.9
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 1.6e-39 167.2 254 46.5
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.8e-39 166.4 213 49.8
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 1.8e-38 163.7 247 47.0
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 8.9e-38 161.4 259 46.3
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 1.2e-37 161.0 342 38.6
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 5.8e-37 158.7 199 53.3
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 1.7e-36 157.1 275 43.3
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 1.7e-36 157.1 243 46.1
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 8.4e-36 154.8 269 44.6
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 9.2e-35 151.4 209 52.6
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 7.8e-34 148.3 249 46.6
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 3.9e-33 146.0 210 48.6
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 1.9e-32 143.7 255 43.1
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 7.3e-32 141.7 174 55.7
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 1.2e-29 134.4 175 52.6
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 4.9e-28 129.0 243 42.8
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 1.1e-27 127.9 268 40.7
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 8.1e-23 111.7 250 38.4
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 1.1e-22 111.3 237 39.7
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 2.0e-21 107.1 107 63.6
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 5.8e-21 105.5 170 49.4
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 1.4e-19 100.9 236 37.7
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 5.6e-16 89.0 92 53.3
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 4.8e-15 85.9 82 54.9
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 6.2e-15 85.5 75 58.7
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 8.1e-15 85.1 204 38.7
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 1.6e-10 70.9 79 55.7
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 1.0e-09 68.2 63 57.1
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 2.3e-09 67.0 63 55.6
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 2.3e-09 67.0 63 55.6
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 1.1e-08 64.7 62 56.5
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 1.5e-08 64.3 59 59.3
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 1.3e-07 61.2 41 70.7
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 1.3e-07 61.2 62 54.8
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 1.3e-07 61.2 41 70.7
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 2.1e-07 60.5 51 62.7
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 4.8e-07 59.3 41 68.3
A09p66240 Brassica napus HOM05D002674 ORTHO05D007700 6.2e-07 58.9 42 69.0
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 6.2e-07 58.9 40 70.0
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 2.4e-06 57.0 43 67.4


User provided reference genes

Program Settings