Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0625 Ceratophyllum demersum HOM05D000709 ORTHO05D021077 7.0e-110 400.6 196 100.0
CDE11G0448 Ceratophyllum demersum HOM05D000709 ORTHO05D021077 1.3e-84 316.6 167 95.2
MBI12_g21978_MAGBIO Magnolia biondii HOM05D000709 ORTHO05D002401 2.5e-27 126.3 148 49.3
Lsat_1_v5_gn_3_57981 Lactuca sativa HOM05D000709 ORTHO05D002401 3.1e-25 119.4 126 53.2
Gohir.D12G173700 Gossypium hirsutum HOM05D000709 ORTHO05D002401 1.2e-24 117.5 150 47.3
Gohir.A12G170500 Gossypium hirsutum HOM05D000709 ORTHO05D002401 1.5e-24 117.1 150 46.7
Gorai.008G186300 Gossypium raimondii HOM05D000709 ORTHO05D002401 2.0e-24 116.7 150 47.3
Dinv21134 Davidia involucrata HOM05D000709 ORTHO05D002401 2.6e-24 116.3 203 41.9
TAR374G1466 Trochodendron aralioides HOM05D000709 ORTHO05D002401 2.6e-24 116.3 103 58.3
TAR622G0092 Trochodendron aralioides HOM05D000709 ORTHO05D002401 3.4e-24 115.9 188 42.0
COL.COLO4_07867 Corchorus olitorius HOM05D000709 ORTHO05D002401 4.5e-24 115.5 105 59.0
Duzib248G0470 Durio zibethinus HOM05D000709 ORTHO05D002401 4.5e-24 115.5 200 41.0
Duzib251G0863 Durio zibethinus HOM05D000709 ORTHO05D002401 7.6e-24 114.8 104 61.5
Atru.chr11.1354 Acer truncatum HOM05D000709 ORTHO05D002401 2.2e-23 113.2 107 58.9
Hma1.2p1_0406F.1_g146040 Hydrangea macrophylla HOM05D000709 ORTHO05D002401 6.5e-23 111.7 106 56.6
Nn3g17722 Nelumbo nucifera HOM05D000709 ORTHO05D002401 8.4e-23 111.3 182 41.2
Haze_17441 Corylus avellana HOM05D000709 ORTHO05D002401 1.4e-22 110.5 210 40.5
PGR119G0617 Punica granatum HOM05D000709 ORTHO05D002401 1.9e-22 110.2 202 39.1
QL01p045366 Quercus lobata HOM05D000709 ORTHO05D002401 1.9e-22 110.2 194 41.8
Glyma.02G100200 Glycine max HOM05D000709 ORTHO05D002401 2.5e-22 109.8 174 42.5
CiPaw.15G003500 Carya illinoinensis HOM05D000709 ORTHO05D002401 4.2e-22 109.0 201 40.3
TAR371G0746 Trochodendron aralioides HOM05D000709 ORTHO05D002401 4.2e-22 109.0 103 56.3
FAN22G1336 Fragaria x ananassa HOM05D000709 ORTHO05D002401 5.5e-22 108.6 214 36.0
Thecc.02G361300 Theobroma cacao HOM05D000709 ORTHO05D002401 5.5e-22 108.6 206 38.3
Dinv16506 Davidia involucrata HOM05D000709 ORTHO05D002401 7.1e-22 108.2 106 56.6
Sabra10G0098700 Salix brachista HOM05D000709 ORTHO05D002401 7.1e-22 108.2 185 42.7
GSVIVG01011954001 Vitis vinifera HOM05D000709 ORTHO05D002401 7.1e-22 108.2 188 38.8
Os06g0267500 Oryza sativa ssp. japonica HOM05D000709 ORTHO05D002401 9.3e-22 107.8 118 55.9
Psat0s2763g0040 Pisum sativum HOM05D000709 ORTHO05D002401 9.3e-22 107.8 187 41.2
CANSAT64G0846 Cannabis sativa HOM05D000709 ORTHO05D002401 1.2e-21 107.5 104 55.8
Nitab4.5_0004122g0040 Nicotiana tabacum HOM05D000709 ORTHO05D002401 1.2e-21 107.5 104 54.8
Actinidia16618 Actinidia chinensis HOM05D000709 ORTHO05D002401 2.1e-21 106.7 105 54.3
Glyma.01G088200 Glycine max HOM05D000709 ORTHO05D002401 2.1e-21 106.7 192 41.1
THA.LOC104801756 Tarenaya hassleriana HOM05D000709 ORTHO05D002401 2.1e-21 106.7 94 58.5
Peaxi162Scf00380g00219 Petunia axillaris HOM05D000709 ORTHO05D002401 2.7e-21 106.3 107 54.2
Nn4g23724 Nelumbo nucifera HOM05D000709 ORTHO05D002401 3.5e-21 105.9 97 60.8
vmacro01365 Vaccinium macrocarpon HOM05D000709 ORTHO05D002401 4.6e-21 105.5 200 38.5
Hund25104 Selenicereus undatus HOM05D000709 ORTHO05D002401 6.0e-21 105.1 190 37.9
TWI31G0592 Tripterygium wilfordii HOM05D000709 ORTHO05D002401 7.9e-21 104.8 216 38.0
FvH4_4g28090 Fragaria vesca HOM05D000709 ORTHO05D002401 1.0e-20 104.4 103 52.4
FAN12G0115 Fragaria x ananassa HOM05D000709 ORTHO05D002401 1.0e-20 104.4 103 52.4
FAN17G2510 Fragaria x ananassa HOM05D000709 ORTHO05D002401 1.0e-20 104.4 172 39.0
MD16G1048300 Malus domestica HOM05D000709 ORTHO05D002401 1.0e-20 104.4 106 54.7
Cc11_g10610 Coffea canephora HOM05D000709 ORTHO05D002401 1.3e-20 104.0 200 35.5
Glyma.20G185800 Glycine max HOM05D000709 ORTHO05D002401 1.3e-20 104.0 187 39.6
Lalb_Chr10g0099731 Lupinus albus HOM05D000709 ORTHO05D002401 1.3e-20 104.0 116 50.0
AT1G25580 Arabidopsis thaliana HOM05D000709 ORTHO05D002401 1.8e-20 103.6 118 49.2
Phvul.003G027100 Phaseolus vulgaris HOM05D000709 ORTHO05D002401 2.3e-20 103.2 118 51.7
AL1G39720 Arabidopsis lyrata HOM05D000709 ORTHO05D002401 3.0e-20 102.8 119 45.4
FAN07G0271 Fragaria x ananassa HOM05D000709 ORTHO05D002401 3.0e-20 102.8 217 33.6
Potri.008G116600 Populus trichocarpa HOM05D000709 ORTHO05D002401 3.0e-20 102.8 180 42.2
Sed0013338 Sechium edule HOM05D000709 ORTHO05D002401 3.0e-20 102.8 186 39.8
CAN.G184.90 Capsicum annuum HOM05D000709 ORTHO05D002401 3.9e-20 102.4 108 51.9
arahy.Tifrunner.gnm1.ann1.UCK419 Arachis hypogaea HOM05D000709 ORTHO05D002401 5.1e-20 102.1 188 40.4
Cpa.g.sc53.116 Carica papaya HOM05D000709 ORTHO05D002401 5.1e-20 102.1 106 53.8
Manes.06G072300 Manihot esculenta HOM05D000709 ORTHO05D002401 5.1e-20 102.1 104 54.8
CARHR025860 Cardamine hirsuta HOM05D000709 ORTHO05D002401 6.7e-20 101.7 107 50.5
Manes.14G097400 Manihot esculenta HOM05D000709 ORTHO05D002401 8.7e-20 101.3 208 37.0
Carub.0001s2490 Capsella rubella HOM05D000709 ORTHO05D002401 1.1e-19 100.9 153 39.2
Sopen05g005650 Solanum pennellii HOM05D000709 ORTHO05D002401 1.1e-19 100.9 190 38.4
MSTRG.7689 Avicennia marina HOM05D000709 ORTHO05D002401 1.5e-19 100.5 174 39.1
MELO3C012215.2 Cucumis melo HOM05D000709 ORTHO05D002401 1.5e-19 100.5 183 38.3
RcHm_v2.0_Chr4g0435841 Rosa chinensis HOM05D000709 ORTHO05D002401 1.5e-19 100.5 104 51.9
Solyc05g009840.3 Solanum lycopersicum HOM05D000709 ORTHO05D002401 1.5e-19 100.5 190 38.4
THA.LOC104821963 Tarenaya hassleriana HOM05D000709 ORTHO05D002401 1.5e-19 100.5 102 53.9
CsaV3_5G033980 Cucumis sativus L. HOM05D000709 ORTHO05D002401 1.9e-19 100.1 107 52.3
HanXRQChr17g0552261 Helianthus annuus HOM05D000709 ORTHO05D002401 1.9e-19 100.1 110 50.0
AUR62035283 Chenopodium quinoa HOM05D000709 ORTHO05D002401 2.5e-19 99.8 177 38.4
Ciclev10031598m.g Citrus clementina HOM05D000709 ORTHO05D002401 2.5e-19 99.8 183 37.7
MD13G1046600 Malus domestica HOM05D000709 ORTHO05D002401 2.5e-19 99.8 105 52.4
Prupe.1G305300 Prunus persica HOM05D000709 ORTHO05D002401 2.5e-19 99.8 100 56.0
CSS0012182 Camellia sinensis var. sinensis HOM05D000709 ORTHO05D002401 3.3e-19 99.4 176 39.8
Rhsim09G0112100 Rhododendron simsii HOM05D000709 ORTHO05D002401 3.3e-19 99.4 105 51.4
Eucgr.G02349 Eucalyptus grandis HOM05D000709 ORTHO05D002401 4.3e-19 99.0 133 44.4
Potri.010G129700 Populus trichocarpa HOM05D000709 ORTHO05D002401 4.3e-19 99.0 104 53.8
Sed0020682 Sechium edule HOM05D000709 ORTHO05D002401 4.3e-19 99.0 105 51.4
PGSC0003DMG400000809 Solanum tuberosum HOM05D000709 ORTHO05D002401 4.3e-19 99.0 190 37.4
CSS0016712 Camellia sinensis var. sinensis HOM05D000709 ORTHO05D002401 5.7e-19 98.6 97 55.7
CSS0037976 Camellia sinensis var. sinensis HOM05D000709 ORTHO05D002401 5.7e-19 98.6 97 55.7
Aa31LG7G8920 Aethionema arabicum HOM05D005369 ORTHO05D006955 7.4e-19 98.2 100 55.0
CSS0041233 Camellia sinensis var. sinensis HOM05D000709 ORTHO05D002401 7.4e-19 98.2 194 37.1
ECA246G2234 Erigeron canadensis HOM05D000709 ORTHO05D002401 7.4e-19 98.2 138 42.8
Sp1g22630 Schrenkiella parvula HOM05D000709 ORTHO05D002401 7.4e-19 98.2 100 51.0
AUR62002922 Chenopodium quinoa HOM05D000709 ORTHO05D002401 9.7e-19 97.8 177 38.4
Medtr5g053430 Medicago truncatula HOM05D000709 ORTHO05D002401 9.7e-19 97.8 216 38.0
arahy.Tifrunner.gnm1.ann1.919QYJ Arachis hypogaea HOM05D000709 ORTHO05D002401 1.3e-18 97.4 210 35.2
A09p39660 Brassica napus HOM05D000709 ORTHO05D002401 1.3e-18 97.4 148 42.6
BraA09t39462Z Brassica rapa HOM05D000709 ORTHO05D002401 1.3e-18 97.4 148 42.6
Rhsim12G0081600 Rhododendron simsii HOM05D000709 ORTHO05D002401 1.3e-18 97.4 207 37.7
unitig_22.g5565 Utricularia gibba HOM05D000709 ORTHO05D002401 1.3e-18 97.4 100 53.0
Actinidia38391 Actinidia chinensis HOM05D000709 ORTHO05D002401 2.2e-18 96.7 174 40.8
arahy.Tifrunner.gnm1.ann1.XMHS8A Arachis hypogaea HOM05D000709 ORTHO05D002401 2.2e-18 96.7 210 35.2
ClCG05G023020 Citrullus lanatus HOM05D000709 ORTHO05D002401 2.2e-18 96.7 107 51.4
Glyma.10G204700 Glycine max HOM05D000709 ORTHO05D002401 2.2e-18 96.7 194 38.7
vmacro10529 Vaccinium macrocarpon HOM05D000709 ORTHO05D002401 3.7e-18 95.9 121 45.5
VMungo1215G2333 Vigna mungo HOM05D000709 ORTHO05D002401 3.7e-18 95.9 187 39.6
Nitab4.5_0011178g0010 Nicotiana tabacum HOM05D000709 ORTHO05D002401 4.8e-18 95.5 106 50.9
EL10Ac6g14495 Beta vulgaris HOM05D000709 ORTHO05D002401 6.3e-18 95.1 200 38.0
Actinidia13674 Actinidia chinensis HOM05D000709 ORTHO05D002401 8.2e-18 94.7 198 38.9
Lj3A1020T58 Lonicera japonica HOM05D000709 ORTHO05D002401 1.1e-17 94.4 124 48.4
C05p24860 Brassica napus HOM05D000709 ORTHO05D002401 1.4e-17 94.0 151 42.4
Ca_05085_v3 Cicer arietinum L. HOM05D000709 ORTHO05D002401 1.4e-17 94.0 192 38.0
BcaB03g14052 Brassica carinata HOM05D000709 ORTHO05D002401 1.8e-17 93.6 99 52.5
DCAR_023688 Daucus carota HOM05D000709 ORTHO05D002401 1.8e-17 93.6 104 50.0
ATR0753G113 Amborella trichopoda HOM05D000709 ORTHO05D002401 2.4e-17 93.2 164 38.4
Oeu041879.2 Olea europaea HOM05D000709 ORTHO05D002401 3.1e-17 92.8 98 55.1
Thhalv10007551m.g Eutrema salsugineum HOM05D000709 ORTHO05D002401 4.1e-17 92.4 100 49.0
Sabra08G0088400 Salix brachista HOM05D000709 ORTHO05D002401 4.1e-17 92.4 178 38.8
TAR629G1111 Trochodendron aralioides HOM05D000709 ORTHO05D002401 4.1e-17 92.4 101 47.5
Lalb_Chr04g0254941 Lupinus albus HOM05D000709 ORTHO05D002401 5.3e-17 92.0 103 49.5
BolC5t31215H Brassica oleracea HOM05D000709 ORTHO05D002401 9.0e-17 91.3 151 41.7
Oeu042026.1 Olea europaea HOM05D000709 ORTHO05D002401 9.0e-17 91.3 195 34.4
Sc04g0006690 Simmondsia chinensis HOM05D000709 ORTHO05D002401 2.0e-16 90.1 89 52.8
Zm00001eb280480 Zea mays HOM05D000709 ORTHO05D002401 2.0e-16 90.1 100 54.0
BcaC05g26650 Brassica carinata HOM05D000709 ORTHO05D002401 3.4e-16 89.4 99 52.5
Ah.03g137940 Amaranthus hybridus HOM05D000709 ORTHO05D002401 1.7e-15 87.0 148 35.8
Zm00001eb280490 Zea mays HOM05D000709 ORTHO05D002401 2.2e-15 86.7 102 52.9
arahy.Tifrunner.gnm1.ann1.13C0EN Arachis hypogaea HOM05D000709 ORTHO05D002401 2.9e-15 86.3 194 37.1
Sc04g0006730 Simmondsia chinensis HOM05D000709 ORTHO05D002401 5.0e-15 85.5 88 52.3
BolC7t42397H Brassica oleracea HOM05D000709 ORTHO05D002401 1.1e-14 84.3 126 44.4
BcaC06g35188 Brassica carinata HOM05D000709 ORTHO05D002401 1.4e-14 84.0 126 44.4
C07p18870 Brassica napus HOM05D000709 ORTHO05D002401 1.4e-14 84.0 126 44.4
Lj2g0017681 Lotus japonicus HOM05D000709 ORTHO05D002401 1.4e-12 77.4 81 56.8
Zm00001eb308090 Zea mays HOM05D000709 ORTHO05D021077 6.7e-12 75.1 76 55.3
Hund05768 Selenicereus undatus HOM05D000709 ORTHO05D002401 4.3e-11 72.4 202 31.7
BcaC06g31650 Brassica carinata HOM05D000709 ORTHO05D021077 7.4e-11 71.6 98 46.9
PSO063G7345 Papaver somniferum HOM05D000709 ORTHO05D002401 8.2e-10 68.2 166 33.7
Medtr1g093670 Medicago truncatula HOM05D000709 ORTHO05D002401 6.9e-09 65.1 188 31.4
PSO782G4918 Papaver somniferum HOM05D000709 ORTHO05D002401 6.9e-09 65.1 264 28.0
BraA07t29046Z Brassica rapa HOM05D001835 ORTHO05D001899 5.9e-08 62.0 91 45.1
BcaC05g26436 Brassica carinata HOM05D000709 ORTHO05D021077 1.0e-07 61.2 60 53.3
Medtr1g093680 Medicago truncatula HOM05D000709 ORTHO05D002401 1.9e-06 57.0 103 36.9


User provided reference genes

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