Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 0.0e+00 1117.8 559 100.0
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 3.8e-169 599.0 506 61.3
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 1.0e-166 590.9 527 59.4
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 6.3e-164 581.6 486 59.5
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 2.4e-163 579.7 536 58.2
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 5.3e-163 578.6 556 54.1
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 7.0e-163 578.2 479 60.1
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 2.0e-162 576.6 408 67.2
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 7.7e-162 574.7 531 59.1
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 3.8e-161 572.4 408 67.4
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 3.2e-160 569.3 547 55.4
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 3.2e-160 569.3 420 64.8
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.2e-159 567.4 487 57.5
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 1.6e-159 567.0 486 57.0
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 6.1e-159 565.1 486 57.0
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 6.1e-159 565.1 478 59.4
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 1.0e-158 564.3 537 54.9
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 5.2e-158 562.0 490 58.8
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 8.8e-158 561.2 511 55.2
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 1.1e-157 560.8 548 53.6
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 1.5e-157 560.5 436 61.5
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 5.7e-157 558.5 472 58.7
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 7.4e-157 558.1 535 54.2
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 2.8e-156 556.2 502 56.4
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 1.1e-155 554.3 480 57.9
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 1.4e-155 553.9 419 62.5
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 2.4e-155 553.1 520 54.4
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 2.4e-155 553.1 392 65.3
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 5.3e-155 552.0 459 58.6
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 9.1e-155 551.2 538 53.2
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 2.6e-154 549.7 532 53.6
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 3.8e-153 545.8 529 53.7
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 8.5e-153 544.7 442 58.1
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 1.1e-152 544.3 480 56.9
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.5e-152 543.9 507 54.0
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 1.5e-152 543.9 477 58.3
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 1.9e-152 543.5 470 57.0
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 2.5e-152 543.1 521 54.1
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 9.4e-152 541.2 479 56.6
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 1.2e-151 540.8 419 62.8
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 1.2e-151 540.8 402 64.4
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 2.1e-151 540.0 532 53.6
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 2.1e-151 540.0 418 61.7
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 3.6e-151 539.3 477 56.0
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 3.6e-151 539.3 392 62.0
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 4.7e-151 538.9 431 58.9
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 6.1e-151 538.5 511 53.6
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 8.0e-151 538.1 397 63.7
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 1.8e-150 537.0 413 61.7
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 2.3e-150 536.6 464 56.5
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 5.2e-150 535.4 465 59.6
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 5.2e-150 535.4 525 53.7
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 8.8e-150 534.6 459 57.3
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 1.5e-149 533.9 400 61.5
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 3.3e-149 532.7 516 54.3
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 1.3e-148 530.8 482 56.2
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 8.3e-148 528.1 539 51.9
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 1.4e-147 527.3 483 55.9
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 2.4e-147 526.6 409 61.1
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 1.6e-146 523.9 456 55.5
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 1.6e-146 523.9 411 59.4
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 4.5e-146 522.3 479 54.7
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 7.7e-146 521.5 420 57.9
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 2.5e-144 516.5 495 56.4
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 3.2e-144 516.2 483 55.9
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 4.2e-144 515.8 466 56.2
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 9.4e-144 514.6 480 54.8
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 4.7e-143 512.3 372 64.2
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 4.7e-143 512.3 466 57.5
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 1.0e-142 511.1 466 54.3
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 6.8e-142 508.4 461 55.5
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 8.8e-142 508.1 485 55.5
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 1.5e-141 507.3 483 55.1
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 1.3e-140 504.2 485 54.4
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 3.7e-140 502.7 480 53.5
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 4.8e-140 502.3 468 56.2
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 9.1e-139 498.0 394 61.2
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 5.9e-138 495.4 490 53.9
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 2.3e-137 493.4 525 49.3
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 8.0e-135 485.0 415 55.2
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 9.2e-131 471.5 346 61.8
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 1.1e-128 464.5 426 54.7
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 1.9e-120 437.2 388 52.1
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 2.1e-119 433.7 430 48.4
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 2.0e-117 427.2 460 45.4
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 2.1e-114 417.2 299 66.6
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 1.2e-111 407.9 309 62.1
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 3.6e-111 406.4 278 68.0
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 8.9e-110 401.7 557 45.1
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 2.6e-109 400.2 314 63.1
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 1.0e-105 388.3 349 52.1
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 4.4e-101 372.9 562 42.0
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 3.5e-98 363.2 285 62.5
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 2.5e-96 357.1 283 59.4
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.4e-94 351.3 529 39.3
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 5.6e-88 329.3 243 65.4
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 1.3e-87 328.2 216 69.9
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 4.0e-86 323.2 364 45.3
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 1.3e-84 318.2 363 44.9
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 7.1e-83 312.4 225 66.2
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 7.9e-82 308.9 227 64.3
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 4.8e-79 299.7 229 63.3
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.8e-62 244.6 165 66.7
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 3.2e-59 233.8 322 38.5
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 2.7e-58 230.7 242 49.6
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 1.8e-57 228.0 540 30.6
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 2.8e-47 194.1 308 34.1
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 3.3e-40 170.6 196 48.0
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 6.3e-39 166.4 110 71.8
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 1.4e-38 165.2 404 30.9
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 5.0e-36 156.8 190 46.3
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 2.1e-34 151.4 190 46.8
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 2.1e-34 151.4 125 56.0
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 6.1e-34 149.8 185 44.9
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 6.1e-34 149.8 368 29.9
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 2.3e-33 147.9 107 69.2
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.5e-27 128.6 91 69.2
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 4.4e-24 117.1 121 47.1
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 1.7e-23 115.2 203 38.9
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 5.7e-16 90.1 98 46.9
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 3.5e-13 80.9 62 56.5
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 1.9e-11 75.1 66 60.6
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-08 65.5 109 39.4
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 3.7e-07 60.8 37 70.3
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 3.2e-06 57.8 34 61.8


User provided reference genes

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