Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 1.0e-66 256.5 123 100.0
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 1.5e-38 162.9 93 82.8
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 6.5e-21 104.4 90 52.2
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 4.2e-20 101.7 91 50.5
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 1.2e-19 100.1 90 51.1
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 2.7e-19 99.0 91 52.7
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 6.1e-19 97.8 92 47.8
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 1.4e-18 96.7 83 57.8
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 3.0e-18 95.5 85 52.9
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 3.0e-18 95.5 92 48.9
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 3.9e-18 95.1 89 50.6
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 8.8e-18 94.0 96 47.9
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 1.1e-17 93.6 85 52.9
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 1.5e-17 93.2 87 49.4
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 3.3e-17 92.0 89 49.4
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 3.3e-17 92.0 88 54.5
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 3.3e-17 92.0 85 48.2
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 3.3e-17 92.0 89 48.3
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 3.3e-17 92.0 104 41.3
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 4.3e-17 91.7 121 39.7
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 5.7e-17 91.3 89 47.2
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 7.4e-17 90.9 93 48.4
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 7.4e-17 90.9 91 49.5
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 9.7e-17 90.5 90 48.9
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 1.3e-16 90.1 90 46.7
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 1.3e-16 90.1 90 48.9
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 1.3e-16 90.1 90 48.9
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 1.3e-16 90.1 90 48.9
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 1.7e-16 89.7 90 48.9
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 1.7e-16 89.7 91 45.1
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 2.2e-16 89.4 85 52.9
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 2.8e-16 89.0 86 48.8
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 3.7e-16 88.6 88 53.4
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 3.7e-16 88.6 85 48.2
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 4.8e-16 88.2 93 43.0
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 4.8e-16 88.2 83 49.4
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 4.8e-16 88.2 85 45.9
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 6.3e-16 87.8 83 53.0
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 8.2e-16 87.4 89 46.1
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 8.2e-16 87.4 90 47.8
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 8.2e-16 87.4 85 47.1
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 8.2e-16 87.4 91 49.5
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 1.1e-15 87.0 93 43.0
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 1.4e-15 86.7 89 47.2
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.4e-15 86.7 90 45.6
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 1.4e-15 86.7 85 47.1
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 1.4e-15 86.7 95 48.4
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 1.8e-15 86.3 90 45.6
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.8e-15 86.3 90 45.6
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.8e-15 86.3 90 45.6
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 1.8e-15 86.3 91 46.2
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 2.4e-15 85.9 91 44.0
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 2.4e-15 85.9 91 46.2
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 2.4e-15 85.9 85 47.1
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 3.1e-15 85.5 91 45.1
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 3.1e-15 85.5 85 47.1
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 4.1e-15 85.1 89 43.8
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 5.3e-15 84.7 117 41.0
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 6.9e-15 84.3 92 45.7
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 6.9e-15 84.3 85 45.9
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 6.9e-15 84.3 84 47.6
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 9.1e-15 84.0 85 45.9
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 1.2e-14 83.6 95 43.2
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 1.2e-14 83.6 88 45.5
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 1.5e-14 83.2 85 49.4
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.5e-14 83.2 90 44.4
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 1.5e-14 83.2 90 47.8
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 1.5e-14 83.2 89 47.2
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 1.5e-14 83.2 85 45.9
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 2.6e-14 82.4 86 44.2
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 2.6e-14 82.4 89 46.1
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 3.4e-14 82.0 93 45.2
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 4.5e-14 81.6 90 43.3
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 4.5e-14 81.6 83 45.8
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 7.7e-14 80.9 90 45.6
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 1.0e-13 80.5 89 46.1
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 1.0e-13 80.5 89 46.1
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 1.0e-13 80.5 86 44.2
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 1.0e-13 80.5 90 44.4
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 1.3e-13 80.1 91 47.3
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 1.3e-13 80.1 83 45.8
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 1.7e-13 79.7 89 46.1
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 2.2e-13 79.3 91 47.3
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 2.2e-13 79.3 89 46.1
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 2.2e-13 79.3 86 46.5
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 2.9e-13 79.0 58 62.1
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 2.9e-13 79.0 94 45.7
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 3.8e-13 78.6 85 47.1
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 3.8e-13 78.6 88 48.9
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 3.8e-13 78.6 84 46.4
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 6.5e-13 77.8 82 46.3
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 6.5e-13 77.8 135 37.8
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 8.5e-13 77.4 91 47.3
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 8.5e-13 77.4 87 44.8
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 4.2e-12 75.1 82 45.1
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 5.5e-12 74.7 106 40.6
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 9.4e-12 73.9 90 43.3
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 1.5e-09 66.6 69 49.3
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 1.5e-09 66.6 57 54.4
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 1.5e-06 56.6 91 34.1
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 2.0e-06 56.2 91 34.1
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 4.5e-06 55.1 117 31.6


User provided reference genes

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