Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 6.8e-204 713.8 356 100.0
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.8e-148 529.6 357 72.3
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 2.6e-147 525.8 358 72.6
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 1.9e-142 509.6 358 69.6
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 1.6e-141 506.5 352 69.6
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 2.1e-141 506.1 350 70.0
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 4.8e-141 505.0 360 68.6
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 8.1e-141 504.2 368 67.1
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 1.4e-140 503.4 362 68.5
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.4e-140 503.4 352 69.0
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 9.0e-140 500.7 361 67.9
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.2e-139 500.4 350 68.6
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 3.4e-139 498.8 350 68.6
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 5.8e-139 498.0 360 67.2
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 5.8e-139 498.0 371 65.5
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 1.3e-138 496.9 362 66.3
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 1.1e-137 493.8 362 65.7
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 1.4e-137 493.4 360 68.3
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 3.2e-137 492.3 368 65.8
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 3.2e-137 492.3 362 65.7
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 1.6e-136 490.0 362 65.5
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 2.7e-136 489.2 359 68.2
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 2.7e-136 489.2 360 68.6
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.7e-136 489.2 359 64.9
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 3.5e-136 488.8 362 66.6
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 4.6e-136 488.4 354 66.9
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 4.6e-136 488.4 362 65.5
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.3e-135 486.9 364 65.1
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.3e-135 486.9 364 65.1
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 3.0e-135 485.7 363 64.7
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 6.7e-135 484.6 353 68.0
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 1.1e-134 483.8 348 67.2
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.5e-134 483.4 362 64.1
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 1.9e-134 483.0 362 65.2
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 2.5e-134 482.6 357 64.4
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 3.3e-134 482.3 362 66.6
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 4.3e-134 481.9 379 65.2
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 5.6e-134 481.5 329 68.7
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 1.3e-133 480.3 362 64.9
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.6e-133 479.9 361 66.2
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 2.8e-133 479.2 355 65.9
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 6.2e-133 478.0 352 67.9
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 8.1e-133 477.6 354 65.5
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 1.8e-132 476.5 354 65.0
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 2.4e-132 476.1 383 62.7
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 3.1e-132 475.7 351 65.5
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 4.0e-132 475.3 355 65.6
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 6.9e-132 474.6 352 65.9
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 6.9e-132 474.6 356 64.3
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 9.0e-132 474.2 364 64.6
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 1.2e-131 473.8 352 67.0
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 1.2e-131 473.8 350 67.1
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 2.6e-131 472.6 352 67.0
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 2.6e-131 472.6 352 66.8
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 2.6e-131 472.6 363 64.2
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 5.8e-131 471.5 361 64.3
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 7.6e-131 471.1 349 65.0
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 7.6e-131 471.1 350 64.3
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.0e-130 470.7 352 66.2
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.3e-130 470.3 358 63.7
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 1.7e-130 469.9 353 66.0
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.7e-130 469.9 356 63.5
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 2.9e-130 469.2 351 64.1
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 3.8e-130 468.8 355 65.1
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 6.5e-130 468.0 352 65.6
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 1.4e-129 466.8 352 66.2
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 1.4e-129 466.8 352 66.2
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.5e-129 466.1 360 64.4
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 4.2e-129 465.3 359 63.2
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 5.5e-129 464.9 353 65.2
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 5.5e-129 464.9 362 63.5
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 9.3e-129 464.2 364 63.7
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 1.6e-128 463.4 349 65.9
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.0e-127 460.7 355 63.9
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 1.3e-127 460.3 363 63.6
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 8.7e-127 457.6 330 67.0
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 1.1e-126 457.2 360 62.5
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.5e-126 456.8 352 65.1
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 1.5e-126 456.8 358 64.2
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.5e-126 456.1 329 67.5
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 4.3e-126 455.3 346 65.9
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 2.4e-124 449.5 355 63.7
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 4.1e-124 448.7 360 63.1
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 9.0e-124 447.6 437 54.5
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 9.0e-124 447.6 354 63.3
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 4.5e-123 445.3 335 65.1
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 5.8e-123 444.9 337 67.1
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 5.8e-123 444.9 359 62.7
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 6.5e-122 441.4 367 60.2
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 1.4e-121 440.3 358 61.5
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 2.5e-121 439.5 339 63.4
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 4.2e-121 438.7 358 61.2
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 5.5e-121 438.3 360 61.7
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 3.9e-119 432.2 316 68.0
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 5.1e-119 431.8 360 61.4
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 1.9e-118 429.9 312 66.7
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 1.1e-116 424.1 310 67.7
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.7e-114 416.8 361 60.9
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.4e-113 413.7 422 52.8
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 2.5e-113 412.9 403 54.8
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 3.1e-108 396.0 344 59.3
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 5.5e-105 385.2 288 65.6
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 2.1e-104 383.3 282 66.7
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 6.7e-103 378.3 304 61.8
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 2.0e-102 376.7 286 66.1
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 7.4e-102 374.8 335 56.7
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 5.0e-98 362.1 276 65.6
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 2.5e-97 359.8 281 64.1
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 5.7e-94 348.6 252 69.4
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 4.1e-92 342.4 299 59.5
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 1.2e-91 340.9 348 51.7
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 6.5e-90 335.1 324 56.2
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 1.6e-88 330.5 298 55.7
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 1.8e-84 317.0 265 59.6
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 1.8e-84 317.0 260 59.2
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 1.9e-73 280.4 446 38.1
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 5.8e-62 242.3 355 42.5
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 8.3e-61 238.4 338 41.4
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.2e-52 209.9 345 36.8
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 2.8e-48 196.8 175 58.9
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 4.4e-46 189.5 271 44.6
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 7.8e-43 178.7 240 46.2
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 3.3e-41 173.3 209 48.8
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 6.2e-40 169.1 180 53.3
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.4e-38 163.3 180 51.7
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 1.4e-36 157.9 112 65.2
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 1.7e-34 151.0 244 41.8
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 2.8e-24 117.1 121 50.4
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-20 104.8 188 37.8
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 1.8e-18 97.8 69 63.8
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 9.6e-17 92.0 71 60.6
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 7.1e-12 75.9 227 27.8
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 1.6e-11 74.7 59 55.9
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 5.7e-09 66.2 83 45.8
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 6.9e-07 59.3 34 73.5


User provided reference genes

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