Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0497 Ceratophyllum demersum HOM05D003119 ORTHO05D003559 2.4e-47 191.8 94 100.0
Dinv43414 Davidia involucrata HOM05D003119 ORTHO05D003559 1.6e-27 125.9 64 85.9
Cc02_g29010 Coffea canephora HOM05D003119 ORTHO05D003559 2.7e-27 125.2 64 85.9
HPP92_012079 Vanilla planifolia HOM05D003119 ORTHO05D003559 2.7e-27 125.2 64 84.4
Nitab4.5_0000707g0170 Nicotiana tabacum HOM05D003119 ORTHO05D003559 6.0e-27 124.0 64 85.9
Nitab4.5_0008441g0010 Nicotiana tabacum HOM05D003119 ORTHO05D003559 6.0e-27 124.0 64 85.9
Peaxi162Scf00694g00124 Petunia axillaris HOM05D003119 ORTHO05D003559 6.0e-27 124.0 64 85.9
Solyc01g087610.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 6.0e-27 124.0 64 85.9
Sopen01g034580 Solanum pennellii HOM05D003119 ORTHO05D003559 6.0e-27 124.0 64 85.9
PSO063G0387 Papaver somniferum HOM05D003119 ORTHO05D003559 7.9e-27 123.6 64 81.2
Medtr3g032980 Medicago truncatula HOM05D003119 ORTHO05D003559 1.0e-26 123.2 64 84.4
vmacro13692 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 1.0e-26 123.2 64 84.4
ClCG09G003910 Citrullus lanatus HOM05D003119 ORTHO05D003559 1.8e-26 122.5 70 80.0
QL04p009441 Quercus lobata HOM05D003119 ORTHO05D003559 1.8e-26 122.5 64 79.7
HPP92_012082 Vanilla planifolia HOM05D003119 ORTHO05D003559 1.8e-26 122.5 64 82.8
GSVIVG01032165001 Vitis vinifera HOM05D003119 ORTHO05D003559 1.8e-26 122.5 64 79.7
MD07G1018500 Malus domestica HOM05D003119 ORTHO05D003559 2.3e-26 122.1 64 82.8
Manes.10G139100 Manihot esculenta HOM05D003119 ORTHO05D003559 2.3e-26 122.1 64 82.8
TWI60G0203 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 2.3e-26 122.1 64 79.7
Zm00001eb394460 Zea mays HOM05D003119 ORTHO05D003559 2.3e-26 122.1 64 85.9
CAN.G219.63 Capsicum annuum HOM05D003119 ORTHO05D003559 3.0e-26 121.7 64 82.8
Lalb_Chr04g0263891 Lupinus albus HOM05D003119 ORTHO05D003559 3.0e-26 121.7 64 81.2
Phvul.005G023300 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 3.0e-26 121.7 64 82.8
Aa31sc576G10 Aethionema arabicum HOM05D003119 ORTHO05D003559 3.9e-26 121.3 64 79.7
Ca_14529_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 3.9e-26 121.3 64 82.8
Migut.B01276 Erythranthe guttata HOM05D003119 ORTHO05D003559 3.9e-26 121.3 64 84.4
Psat5g211360 Pisum sativum HOM05D003119 ORTHO05D003559 3.9e-26 121.3 64 81.2
Rhsim07G0058300 Rhododendron simsii HOM05D003119 ORTHO05D003559 3.9e-26 121.3 61 90.2
Aqoxy4G00031 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 5.1e-26 120.9 64 79.7
arahy.Tifrunner.gnm1.ann1.X582RR Arachis hypogaea HOM05D003119 ORTHO05D003559 5.1e-26 120.9 64 82.8
CSS0008603 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 5.1e-26 120.9 64 81.2
CSS0027617 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 5.1e-26 120.9 64 81.2
Gohir.A08G142900 Gossypium hirsutum HOM05D003119 ORTHO05D003559 5.1e-26 120.9 64 81.2
Gohir.D08G163800 Gossypium hirsutum HOM05D003119 ORTHO05D003559 5.1e-26 120.9 64 81.2
Gorai.004G170700 Gossypium raimondii HOM05D003119 ORTHO05D003559 5.1e-26 120.9 64 81.2
Lj7A574G60 Lonicera japonica HOM05D003119 ORTHO05D003559 6.7e-26 120.6 64 79.7
Nn7g36274 Nelumbo nucifera HOM05D003119 ORTHO05D003559 6.7e-26 120.6 64 81.2
Prupe.2G020300 Prunus persica HOM05D003119 ORTHO05D003559 6.7e-26 120.6 64 79.7
TPR.G28382 Trifolium pratense HOM05D000009 ORTHO05D003559 6.7e-26 120.6 64 82.8
TAR633G1226 Trochodendron aralioides HOM05D003119 ORTHO05D003559 6.7e-26 120.6 64 79.7
Atru.chr11.2581 Acer truncatum HOM05D003119 ORTHO05D003559 8.7e-26 120.2 64 79.7
Ciclev10030724m.g Citrus clementina HOM05D003119 ORTHO05D003559 8.7e-26 120.2 64 78.1
COL.COLO4_04878 Corchorus olitorius HOM05D003119 ORTHO05D003559 8.7e-26 120.2 64 81.2
Haze_03156 Corylus avellana HOM05D003119 ORTHO05D003559 8.7e-26 120.2 64 79.7
CsaV3_7G030810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 8.7e-26 120.2 64 81.2
Glyma.10G091000 Glycine max HOM05D003119 ORTHO05D003559 8.7e-26 120.2 64 81.2
Sp6g30330 Schrenkiella parvula HOM05D003119 ORTHO05D003559 8.7e-26 120.2 64 79.7
VMungo1080G0526 Vigna mungo HOM05D003119 ORTHO05D003559 8.7e-26 120.2 64 79.7
CANSAT80G1880 Cannabis sativa HOM05D003119 ORTHO05D003559 1.1e-25 119.8 64 78.1
Cpa.g.sc125.32 Carica papaya HOM05D003119 ORTHO05D003559 1.1e-25 119.8 64 76.6
Duzib133G0610 Durio zibethinus HOM05D003119 ORTHO05D003559 1.1e-25 119.8 64 82.8
Eucgr.G03358 Eucalyptus grandis HOM05D003119 ORTHO05D003559 1.1e-25 119.8 64 79.7
Lj3g0004567 Lotus japonicus HOM05D003119 ORTHO05D003559 1.1e-25 119.8 64 81.2
MSTRG.20565 Avicennia marina HOM05D003119 ORTHO05D003559 1.5e-25 119.4 64 81.2
arahy.Tifrunner.gnm1.ann1.SMYW0Q Arachis hypogaea HOM05D003119 ORTHO05D003559 1.9e-25 119.0 64 81.2
EL10Ac2g04355 Beta vulgaris HOM05D003119 ORTHO05D003559 1.9e-25 119.0 64 79.7
AUR62023087 Chenopodium quinoa HOM05D003119 ORTHO05D003559 1.9e-25 119.0 64 76.6
AT5G13690 Arabidopsis thaliana HOM05D003119 ORTHO05D003559 2.5e-25 118.6 64 76.6
BcaC04g24265 Brassica carinata HOM05D003119 ORTHO05D003559 2.5e-25 118.6 64 79.7
BcaNung04192 Brassica carinata HOM05D003119 ORTHO05D003559 2.5e-25 118.6 64 79.7
Cfa010802 Carpinus fangiana HOM05D003119 ORTHO05D003559 2.5e-25 118.6 64 78.1
CiPaw.13G007600 Carya illinoinensis HOM05D003119 ORTHO05D003559 2.5e-25 118.6 64 79.7
Potri.009G058100 Populus trichocarpa HOM05D003119 ORTHO05D003559 2.5e-25 118.6 64 78.1
Sabra09G0042700 Salix brachista HOM05D003119 ORTHO05D003559 3.3e-25 118.2 64 78.1
AL6G24300 Arabidopsis lyrata HOM05D003119 ORTHO05D003559 5.6e-25 117.5 64 76.6
CARHR199750 Cardamine hirsuta HOM05D003119 ORTHO05D003559 5.6e-25 117.5 64 76.6
ECA234G0904 Erigeron canadensis HOM05D003119 ORTHO05D003559 5.6e-25 117.5 64 78.1
HanXRQChr16g0524981 Helianthus annuus HOM05D003119 ORTHO05D003559 5.6e-25 117.5 64 78.1
CiPaw.14G002300 Carya illinoinensis HOM05D003119 ORTHO05D003559 7.4e-25 117.1 64 78.1
Hma1.2p1_1042F.1_g251140 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 7.4e-25 117.1 64 81.2
PGR031G0137 Punica granatum HOM05D003119 ORTHO05D003559 7.4e-25 117.1 64 78.1
THA.LOC104809848 Tarenaya hassleriana HOM05D003119 ORTHO05D003559 7.4e-25 117.1 64 78.1
Glyma.06G186000 Glycine max HOM05D003119 ORTHO05D003559 9.6e-25 116.7 64 79.7
Lsat_1_v5_gn_4_32101 Lactuca sativa HOM05D003119 ORTHO05D003559 9.6e-25 116.7 64 78.1
RcHm_v2.0_Chr1g0317311 Rosa chinensis HOM05D003119 ORTHO05D003559 9.6e-25 116.7 64 78.1
Thecc.01G407300 Theobroma cacao HOM05D003119 ORTHO05D003559 9.6e-25 116.7 64 78.1
FvH4_7g01470 Fragaria vesca HOM05D003119 ORTHO05D003559 1.3e-24 116.3 64 78.1
FAN01G1325 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.3e-24 116.3 64 78.1
FAN01G3156 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.3e-24 116.3 64 78.1
FAN06G3340 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.3e-24 116.3 64 78.1
FAN10G2435 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.3e-24 116.3 64 78.1
AUR62009404 Chenopodium quinoa HOM05D003119 ORTHO05D003559 1.6e-24 115.9 64 75.0
SalBow3G3123 Salvia bowleyana HOM05D003119 ORTHO05D003559 2.1e-24 115.5 70 68.6
Lsat_1_v5_gn_4_73520 Lactuca sativa HOM05D003119 ORTHO05D003559 2.8e-24 115.2 64 76.6
unitig_61.g26361 Utricularia gibba HOM05D003119 ORTHO05D003559 2.8e-24 115.2 64 79.7
ATR0626G097 Amborella trichopoda HOM05D003119 ORTHO05D003559 3.7e-24 114.8 64 76.6
Sed0001972 Sechium edule HOM05D003119 ORTHO05D003559 3.7e-24 114.8 64 75.0
TWI15G0194 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 3.7e-24 114.8 64 75.0
FAN18G1370 Fragaria x ananassa HOM05D003119 ORTHO05D003559 4.8e-24 114.4 64 78.1
Oeu018528.1 Olea europaea HOM05D003119 ORTHO05D003559 4.8e-24 114.4 64 71.9
Carub.0006s1185 Capsella rubella HOM05D003119 ORTHO05D003559 6.2e-24 114.0 64 75.0
PSO832G2904 Papaver somniferum HOM05D003119 ORTHO05D003559 6.2e-24 114.0 64 73.4
Psat1g118400 Pisum sativum HOM05D003119 ORTHO05D003559 6.2e-24 114.0 64 76.6
AUR62029809 Chenopodium quinoa HOM05D003119 ORTHO05D003559 8.2e-24 113.6 61 77.0
Manes.14G070200 Manihot esculenta HOM05D003119 ORTHO05D003559 1.1e-23 113.2 64 75.0
Psat1g210400 Pisum sativum HOM05D003119 ORTHO05D003559 1.1e-23 113.2 64 76.6
Atru.chr9.2402 Acer truncatum HOM05D003119 ORTHO05D003559 1.4e-23 112.8 64 75.0
Psat1g205680 Pisum sativum HOM05D003119 ORTHO05D003559 1.4e-23 112.8 64 76.6
Potri.012G075932 Populus trichocarpa HOM05D003119 ORTHO05D003559 2.4e-23 112.1 64 71.9
Psat1g118360 Pisum sativum HOM05D003119 ORTHO05D003559 3.1e-23 111.7 64 75.0
PGR083G0248 Punica granatum HOM05D003119 ORTHO05D003559 4.0e-23 111.3 64 75.0
SMO141G0099 Selaginella moellendorffii HOM05D003119 ORTHO05D003559 4.0e-23 111.3 64 73.4
Thecc.03G004100 Theobroma cacao HOM05D003119 ORTHO05D003559 4.0e-23 111.3 64 78.1
ATR0712G088 Amborella trichopoda HOM05D003119 ORTHO05D003559 5.3e-23 110.9 64 73.4
Ciclev10018883m.g Citrus clementina HOM05D003119 ORTHO05D003559 5.3e-23 110.9 64 71.9
Sc10g0000230 Simmondsia chinensis HOM05D003119 ORTHO05D003559 5.3e-23 110.9 64 71.9
Duzib205G0437 Durio zibethinus HOM05D003119 ORTHO05D003559 6.9e-23 110.5 64 75.0
Sabra12G0054100 Salix brachista HOM05D003119 ORTHO05D003559 6.9e-23 110.5 65 70.8
SalBow5G4976 Salvia bowleyana HOM05D003119 ORTHO05D003559 6.9e-23 110.5 83 63.9
Gohir.D07G074200 Gossypium hirsutum HOM05D003119 ORTHO05D003559 9.0e-23 110.2 64 75.0
SEGI_13141 Sequoiadendron giganteum HOM05D003119 ORTHO05D003559 9.0e-23 110.2 64 71.9
AagrBONN_evm.TU.Sc2ySwM_362.673 Anthoceros agrestis HOM05D003119 ORTHO05D003559 1.2e-22 109.8 64 75.0
MELO3C023569.2 Cucumis melo HOM05D003119 ORTHO05D003559 2.0e-22 109.0 82 63.4
Pp3c17_12040 Physcomitrium patens HOM05D003119 ORTHO05D003559 2.6e-22 108.6 64 71.9
Mapoly0144s0027 Marchantia polymorpha HOM05D003119 ORTHO05D003559 3.4e-22 108.2 64 71.9
Zm00001eb068240 Zea mays HOM05D003119 ORTHO05D003559 4.5e-22 107.8 64 71.9
Eucgr.B00338 Eucalyptus grandis HOM05D003119 ORTHO05D003559 1.0e-21 106.7 69 69.6
CSS0022012 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 1.3e-21 106.3 81 61.7
MELO3C017123.2 Cucumis melo HOM05D003119 ORTHO05D003559 1.3e-21 106.3 64 70.3
QL10p012342 Quercus lobata HOM05D003119 ORTHO05D003559 1.7e-21 105.9 64 71.9
Solyc03g113820.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 2.2e-21 105.5 68 66.2
Solyc03g113840.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 2.2e-21 105.5 68 66.2
Dinv20699 Davidia involucrata HOM05D003119 ORTHO05D003559 2.9e-21 105.1 78 62.8
FAN13G2511 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.1e-20 103.2 83 61.4
FvH4_5g16380 Fragaria vesca HOM05D003119 ORTHO05D003559 1.4e-20 102.8 83 60.2
Migut.D01907 Erythranthe guttata HOM05D003119 ORTHO05D003559 1.9e-20 102.4 83 51.8
vmacro19356 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 2.5e-20 102.1 77 57.1
Nitab4.5_0003386g0030 Nicotiana tabacum HOM05D003119 ORTHO05D003559 5.5e-20 100.9 78 59.0
Lj1g0014859 Lotus japonicus HOM05D003119 ORTHO05D003559 7.1e-20 100.5 85 57.6
Peaxi162Scf00017g02524 Petunia axillaris HOM05D003119 ORTHO05D003559 1.2e-19 99.8 83 51.8
Psat1g147240 Pisum sativum HOM05D003119 ORTHO05D003559 1.2e-19 99.8 57 77.2
Sopen03g032890 Solanum pennellii HOM05D003119 ORTHO05D003559 3.5e-19 98.2 87 51.7
Sed0021395 Sechium edule HOM05D003119 ORTHO05D003559 4.6e-19 97.8 71 62.0
TAR629G2536 Trochodendron aralioides HOM05D003119 ORTHO05D003559 7.9e-19 97.1 91 51.6
Lj9C454T4 Lonicera japonica HOM05D003119 ORTHO05D003559 1.0e-18 96.7 86 51.2
Ca_16209_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 2.3e-18 95.5 71 67.6
Nitab4.5_0008927g0020 Nicotiana tabacum HOM05D003119 ORTHO05D003559 3.9e-18 94.7 99 46.5
Thhalv10012727m.g Eutrema salsugineum HOM05D003119 ORTHO05D003559 1.5e-17 92.8 81 53.1
Gorai.001G078400 Gossypium raimondii HOM05D003119 ORTHO05D003559 7.4e-17 90.5 107 45.8
SGA_v2.0_scaffold119G32756 Striga asiatica HOM05D003119 ORTHO05D003559 9.7e-17 90.1 64 68.8
Cc04_g12970 Coffea canephora HOM05D003119 ORTHO05D003559 1.3e-16 89.7 121 39.7
MD14G1187100 Malus domestica HOM05D003119 ORTHO05D003559 2.2e-16 89.0 64 64.1
Aqoxy3G03116 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 8.2e-16 87.0 96 46.9
GSVIVG01007826001 Vitis vinifera HOM05D003119 ORTHO05D003559 1.1e-15 86.7 127 38.6
TPR.G33008 Trifolium pratense HOM05D003119 ORTHO05D003559 4.5e-14 81.3 89 46.1
Actinidia04960 Actinidia chinensis HOM05D003119 ORTHO05D003559 1.7e-13 79.3 64 56.2
arahy.Tifrunner.gnm1.ann1.P53GXH Arachis hypogaea HOM05D003119 ORTHO05D003559 6.5e-13 77.4 84 46.4
ECA232G0870 Erigeron canadensis HOM05D003119 ORTHO05D003559 1.9e-12 75.9 64 56.2
Hma1.2p1_0002F.1_g002830 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 4.2e-12 74.7 84 45.2
QL04p009277 Quercus lobata HOM05D003119 ORTHO05D003559 2.1e-11 72.4 39 71.8
FAN08G2581 Fragaria x ananassa HOM05D003119 ORTHO05D003559 5.1e-10 67.8 37 81.1
Haze_07437 Corylus avellana HOM05D003119 ORTHO05D003559 2.0e-09 65.9 60 53.3
CANSAT11G1746 Cannabis sativa HOM05D003119 ORTHO05D003559 2.8e-08 62.0 37 75.7
CAN.G853.15 Capsicum annuum HOM05D003119 ORTHO05D003559 2.8e-08 62.0 37 70.3
CsaV3_1G001810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 6.3e-08 60.8 37 70.3
HanXRQChr09g0271881 Helianthus annuus HOM05D003119 ORTHO05D003559 6.3e-08 60.8 36 63.9
Gohir.A07G069566 Gossypium hirsutum HOM05D003119 ORTHO05D003559 8.2e-08 60.5 36 75.0
ClCG06G016700 Citrullus lanatus HOM05D003119 ORTHO05D003559 4.1e-07 58.2 37 67.6
BraA02t05183Z Brassica rapa HOM05D003119 ORTHO05D003559 5.3e-07 57.8 27 88.9
Psat0s489g0080 Pisum sativum HOM05D003119 ORTHO05D003559 9.1e-07 57.0 78 38.5
MCO16G065 Micromonas commoda HOM05D003119 ORTHO05D003559 1.5e-06 56.2 54 48.1
A02p02110 Brassica napus HOM05D003119 ORTHO05D003559 2.0e-06 55.8 27 85.2
C02p06360 Brassica napus HOM05D003119 ORTHO05D003559 2.0e-06 55.8 27 85.2
BolC2t06579H Brassica oleracea HOM05D003119 ORTHO05D003559 2.0e-06 55.8 27 85.2
VMungo1309G2946 Vigna mungo HOM05D003119 ORTHO05D003559 2.0e-06 55.8 78 38.5
Medtr3g078410 Medicago truncatula HOM05D003119 ORTHO05D003559 2.6e-06 55.5 78 38.5
Rhsim08G0167900 Rhododendron simsii HOM05D003119 ORTHO05D003559 3.4e-06 55.1 40 52.5
RcHm_v2.0_Chr7g0179731 Rosa chinensis HOM05D003119 ORTHO05D003559 4.5e-06 54.7 27 81.5
MSTRG.4387 Avicennia marina HOM05D003119 ORTHO05D003559 7.7e-06 53.9 30 66.7


User provided reference genes

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