Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 6.1e-138 494.2 260 100.0
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 1.1e-59 234.2 151 84.1
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 2.0e-48 196.8 155 69.0
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 2.0e-48 196.8 133 78.2
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 5.9e-48 195.3 141 73.0
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 5.9e-48 195.3 155 69.0
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 5.9e-48 195.3 133 76.7
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 7.7e-48 194.9 155 69.0
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 1.0e-47 194.5 146 70.5
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 1.0e-47 194.5 156 69.9
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 1.7e-47 193.7 146 70.5
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 1.7e-47 193.7 146 70.5
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 1.7e-47 193.7 146 70.5
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 1.7e-47 193.7 133 77.4
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 2.2e-47 193.4 151 68.9
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 2.9e-47 193.0 151 68.9
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 6.5e-47 191.8 132 75.0
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.1e-46 191.0 145 70.3
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 1.1e-46 191.0 151 69.5
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 2.5e-46 189.9 133 75.2
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 3.2e-46 189.5 145 69.7
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 5.5e-46 188.7 150 69.3
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 9.4e-46 188.0 133 74.4
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 1.2e-45 187.6 152 68.4
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 2.1e-45 186.8 145 68.3
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 2.1e-45 186.8 141 72.3
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 3.6e-45 186.0 145 69.0
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 3.6e-45 186.0 147 69.4
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 4.7e-45 185.7 145 69.0
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 4.7e-45 185.7 152 67.1
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 4.7e-45 185.7 152 69.7
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.0e-44 184.5 155 68.4
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.0e-44 184.5 155 68.4
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 1.0e-44 184.5 133 72.2
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 1.0e-44 184.5 153 68.6
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 1.4e-44 184.1 155 66.5
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 1.8e-44 183.7 145 67.6
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 2.3e-44 183.3 132 72.7
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 4.0e-44 182.6 151 66.9
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 6.7e-44 181.8 150 66.7
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 8.8e-44 181.4 140 70.0
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 8.8e-44 181.4 151 65.6
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 8.8e-44 181.4 156 64.7
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 1.2e-43 181.0 139 69.8
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 2.0e-43 180.3 150 66.0
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 2.6e-43 179.9 153 66.0
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 2.6e-43 179.9 151 65.6
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 2.6e-43 179.9 132 72.7
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 2.6e-43 179.9 151 66.2
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 3.3e-43 179.5 133 72.9
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 7.5e-43 178.3 152 65.8
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 7.5e-43 178.3 152 65.8
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 1.3e-42 177.6 155 63.2
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.3e-42 177.6 152 65.1
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 2.2e-42 176.8 151 65.6
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 2.2e-42 176.8 147 65.3
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 2.2e-42 176.8 150 68.0
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 2.2e-42 176.8 158 65.2
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 2.8e-42 176.4 152 65.1
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 2.8e-42 176.4 153 64.7
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 2.8e-42 176.4 152 64.5
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 3.7e-42 176.0 157 65.6
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 4.8e-42 175.6 153 64.1
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 8.2e-42 174.9 150 66.7
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 1.1e-41 174.5 151 64.9
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 1.1e-41 174.5 147 65.3
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 1.1e-41 174.5 149 67.1
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 1.8e-41 173.7 151 66.2
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 2.4e-41 173.3 157 64.3
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 3.1e-41 172.9 149 66.4
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 3.1e-41 172.9 133 69.2
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 9.1e-41 171.4 123 71.5
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.2e-40 171.0 133 68.4
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 1.2e-40 171.0 137 66.4
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 1.6e-40 170.6 133 69.9
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 1.6e-40 170.6 151 62.3
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 2.7e-40 169.9 147 62.6
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 5.9e-40 168.7 152 63.8
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 5.9e-40 168.7 137 67.9
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 1.7e-39 167.2 155 63.9
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 2.2e-39 166.8 143 60.1
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 2.2e-39 166.8 157 61.8
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 3.8e-39 166.0 133 69.2
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 3.8e-39 166.0 147 63.3
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 3.8e-39 166.0 153 63.4
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 3.8e-39 166.0 155 60.6
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 1.1e-38 164.5 156 60.3
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 2.1e-37 160.2 153 60.8
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 1.8e-36 157.1 153 59.5
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 2.8e-34 149.8 106 74.5
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 2.8e-34 149.8 154 57.8
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 1.6e-32 144.1 154 54.5
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 2.0e-32 143.7 154 53.9
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 4.4e-27 125.9 95 69.5
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 1.3e-26 124.4 109 66.1
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 3.1e-25 119.8 110 59.1
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 1.1e-22 111.3 76 78.9
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 7.3e-22 108.6 76 77.6
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 2.1e-21 107.1 93 62.4
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 5.2e-20 102.4 83 61.4
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 3.4e-19 99.8 73 71.2
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 4.6e-16 89.4 104 45.2
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.0e-15 88.2 76 60.5
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 2.6e-11 73.6 92 51.1
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 3.4e-11 73.2 101 40.6
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 9.2e-09 65.1 46 73.9
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 6.0e-08 62.4 91 42.9
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 1.0e-07 61.6 89 38.2


User provided reference genes

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