Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0402 Ceratophyllum demersum HOM05D004459 ORTHO05D005178 8.2e-70 266.9 134 100.0
Nn3g20066 Nelumbo nucifera HOM05D004459 ORTHO05D005178 6.4e-38 161.0 131 64.1
Aqoxy2G03940 Aquilegia oxysepala HOM05D004459 ORTHO05D005178 5.4e-37 157.9 113 70.8
PSO017G6853 Papaver somniferum HOM05D004459 ORTHO05D005178 7.0e-37 157.5 131 64.1
ClCG02G000030 Citrullus lanatus HOM05D004459 ORTHO05D005178 9.2e-37 157.1 131 64.1
COL.COLO4_16102 Corchorus olitorius HOM05D004459 ORTHO05D005178 9.2e-37 157.1 131 64.1
CsaV3_2G019680 Cucumis sativus L. HOM05D004459 ORTHO05D005178 9.2e-37 157.1 131 64.1
Cfa021481 Carpinus fangiana HOM05D004459 ORTHO05D005178 2.0e-36 156.0 113 71.7
PSO063G5689 Papaver somniferum HOM05D004459 ORTHO05D005178 3.5e-36 155.2 131 62.6
SalBow6G5468 Salvia bowleyana HOM05D004459 ORTHO05D005178 4.6e-36 154.8 131 61.8
QL02p059745 Quercus lobata HOM05D004459 ORTHO05D005178 5.9e-36 154.5 113 71.7
QL02p059784 Quercus lobata HOM05D004459 ORTHO05D005178 5.9e-36 154.5 113 71.7
Gohir.A11G140100 Gossypium hirsutum HOM05D004459 ORTHO05D005178 1.3e-35 153.3 131 61.8
Gohir.D11G146500 Gossypium hirsutum HOM05D004459 ORTHO05D005178 1.3e-35 153.3 131 61.8
Gorai.007G156900 Gossypium raimondii HOM05D004459 ORTHO05D005178 1.3e-35 153.3 131 61.8
CSS0012359 Camellia sinensis var. sinensis HOM05D004459 ORTHO05D005178 1.7e-35 152.9 125 65.6
Lsat_1_v5_gn_5_177641 Lactuca sativa HOM05D004459 ORTHO05D005178 1.7e-35 152.9 134 59.7
Haze_03347 Corylus avellana HOM05D004459 ORTHO05D005178 2.3e-35 152.5 113 69.9
Duzib138G0860 Durio zibethinus HOM05D004459 ORTHO05D005178 2.3e-35 152.5 125 64.0
Glyma.08G347600 Glycine max HOM05D004459 ORTHO05D005178 2.3e-35 152.5 131 63.4
Psat3g149520 Pisum sativum HOM05D004459 ORTHO05D005178 2.3e-35 152.5 131 62.6
Thecc.01G217400 Theobroma cacao HOM05D004459 ORTHO05D005178 2.3e-35 152.5 131 63.4
Dinv14524 Davidia involucrata HOM05D004459 ORTHO05D005178 2.9e-35 152.1 131 62.6
Sed0021622 Sechium edule HOM05D004459 ORTHO05D005178 2.9e-35 152.1 131 61.8
Cc01_g16560 Coffea canephora HOM05D004459 ORTHO05D005178 3.9e-35 151.8 131 61.1
CiPaw.13G050600 Carya illinoinensis HOM05D004459 ORTHO05D005178 5.0e-35 151.4 109 70.6
HanXRQChr01g0015361 Helianthus annuus HOM05D004459 ORTHO05D005178 5.0e-35 151.4 125 60.8
MSTRG.20974 Avicennia marina HOM05D004459 ORTHO05D005178 6.6e-35 151.0 131 60.3
Glyma.18G159000 Glycine max HOM05D004459 ORTHO05D005178 6.6e-35 151.0 131 61.8
Gohir.D07G096900 Gossypium hirsutum HOM05D004459 ORTHO05D005178 6.6e-35 151.0 131 61.1
Gorai.001G104300 Gossypium raimondii HOM05D004459 ORTHO05D005178 6.6e-35 151.0 131 61.1
Lalb_Chr01g0022191 Lupinus albus HOM05D004459 ORTHO05D005178 6.6e-35 151.0 131 61.8
Lj1g0001756 Lotus japonicus HOM05D004459 ORTHO05D005178 8.6e-35 150.6 131 61.8
HanXRQChr04g0108291 Helianthus annuus HOM05D004459 ORTHO05D005178 1.1e-34 150.2 131 60.3
Phvul.008G132450 Phaseolus vulgaris HOM05D004459 ORTHO05D005178 1.1e-34 150.2 131 61.8
Phvul.007G143100 Phaseolus vulgaris HOM05D004459 ORTHO05D005178 1.5e-34 149.8 131 61.1
Lalb_Chr19g0125891 Lupinus albus HOM05D004459 ORTHO05D005178 2.5e-34 149.1 113 67.3
MD10G1158300 Malus domestica HOM05D004459 ORTHO05D005178 3.3e-34 148.7 131 61.1
CANSAT01G2987 Cannabis sativa HOM05D004459 ORTHO05D005178 4.3e-34 148.3 131 61.8
Ciclev10021820m.g Citrus clementina HOM05D004459 ORTHO05D005178 4.3e-34 148.3 131 61.8
Manes.13G050900 Manihot esculenta HOM05D004459 ORTHO05D005178 4.3e-34 148.3 131 62.6
Peaxi162Scf00487g00620 Petunia axillaris HOM05D004459 ORTHO05D005178 4.3e-34 148.3 131 58.8
ECA248G3763 Erigeron canadensis HOM05D004459 ORTHO05D005178 5.6e-34 147.9 134 56.7
Prupe.8G196700 Prunus persica HOM05D004459 ORTHO05D005178 5.6e-34 147.9 131 61.1
RcHm_v2.0_Chr6g0283781 Rosa chinensis HOM05D004459 ORTHO05D005178 5.6e-34 147.9 131 61.1
Solyc06g083260.3 Solanum lycopersicum HOM05D004459 ORTHO05D005178 5.6e-34 147.9 131 59.5
PGSC0003DMG401020104 Solanum tuberosum HOM05D004459 ORTHO05D005178 5.6e-34 147.9 131 59.5
Actinidia23765 Actinidia chinensis HOM05D004459 ORTHO05D005178 7.3e-34 147.5 113 67.3
arahy.Tifrunner.gnm1.ann1.J5WB5S Arachis hypogaea HOM05D004459 ORTHO05D005178 7.3e-34 147.5 131 59.5
Gohir.A07G092400 Gossypium hirsutum HOM05D004459 ORTHO05D005178 7.3e-34 147.5 125 60.8
MD10G1157700 Malus domestica HOM05D004459 ORTHO05D005178 7.3e-34 147.5 131 61.1
Nitab4.5_0005866g0010 Nicotiana tabacum HOM05D004459 ORTHO05D005178 7.3e-34 147.5 131 58.8
PGR083G1823 Punica granatum HOM05D004459 ORTHO05D005178 7.3e-34 147.5 131 61.1
Sopen06g034640 Solanum pennellii HOM05D004459 ORTHO05D005178 7.3e-34 147.5 131 59.5
Actinidia09461 Actinidia chinensis HOM05D004459 ORTHO05D005178 9.5e-34 147.1 131 60.3
THA.LOC104822488 Tarenaya hassleriana HOM05D004459 ORTHO05D005178 9.5e-34 147.1 131 58.8
TWI36G0336 Tripterygium wilfordii HOM05D004459 ORTHO05D005178 9.5e-34 147.1 113 68.1
CiPaw.14G040200 Carya illinoinensis HOM05D004459 ORTHO05D005178 1.2e-33 146.7 127 62.2
Nitab4.5_0002671g0020 Nicotiana tabacum HOM05D004459 ORTHO05D005178 1.2e-33 146.7 131 59.5
DCAR_000515 Daucus carota HOM05D004459 ORTHO05D005178 1.6e-33 146.4 131 61.1
HPP92_001407 Vanilla planifolia HOM05D004459 ORTHO05D005178 2.1e-33 146.0 106 66.0
GSVIVG01006388001 Vitis vinifera HOM05D004459 ORTHO05D005178 2.1e-33 146.0 131 59.5
FvH4_2g18390 Fragaria vesca HOM05D004459 ORTHO05D005178 2.8e-33 145.6 109 68.8
FAN15G2342 Fragaria x ananassa HOM05D004459 ORTHO05D005178 2.8e-33 145.6 109 68.8
Nitab4.5_0000403g0040 Nicotiana tabacum HOM05D004459 ORTHO05D005178 2.8e-33 145.6 131 58.8
MSTRG.17987 Avicennia marina HOM05D004459 ORTHO05D005178 3.6e-33 145.2 131 61.1
Carub.0008s0831 Capsella rubella HOM05D004459 ORTHO05D005178 6.2e-33 144.4 113 65.5
Thhalv10004814m.g Eutrema salsugineum HOM05D004459 ORTHO05D005178 6.2e-33 144.4 113 65.5
Nitab4.5_0003020g0110 Nicotiana tabacum HOM05D004459 ORTHO05D005178 6.2e-33 144.4 131 58.0
Potri.014G194900 Populus trichocarpa HOM05D004459 ORTHO05D005178 6.2e-33 144.4 131 61.8
Migut.D02511 Erythranthe guttata HOM05D004459 ORTHO05D005178 8.0e-33 144.1 131 57.3
Medtr7g055650 Medicago truncatula HOM05D004459 ORTHO05D005178 8.0e-33 144.1 131 60.3
Hund05584 Selenicereus undatus HOM05D004459 ORTHO05D005178 8.0e-33 144.1 117 62.4
Atru.chr6.1442 Acer truncatum HOM05D004459 ORTHO05D005178 1.0e-32 143.7 131 58.0
AL8G21660 Arabidopsis lyrata HOM05D004459 ORTHO05D005178 1.4e-32 143.3 113 65.5
FAN27G2700 Fragaria x ananassa HOM05D004459 ORTHO05D005178 1.4e-32 143.3 109 67.9
THA.LOC104818977 Tarenaya hassleriana HOM05D004459 ORTHO05D005178 1.4e-32 143.3 117 62.4
A06p39040 Brassica napus HOM05D004459 ORTHO05D005178 1.8e-32 142.9 113 65.5
Potri.002G246800 Populus trichocarpa HOM05D004459 ORTHO05D005178 1.8e-32 142.9 131 60.3
THA.LOC104822487 Tarenaya hassleriana HOM05D004459 ORTHO05D005178 1.8e-32 142.9 109 64.2
BcaB07g30038 Brassica carinata HOM05D004459 ORTHO05D005178 2.3e-32 142.5 101 69.3
BraA06t26817Z Brassica rapa HOM05D004459 ORTHO05D005178 2.3e-32 142.5 113 65.5
unitig_0.g407 Utricularia gibba HOM05D004459 ORTHO05D005178 2.3e-32 142.5 125 61.6
AT5G48640 Arabidopsis thaliana HOM05D004459 ORTHO05D005178 3.1e-32 142.1 113 64.6
BcaC03g17668 Brassica carinata HOM05D004459 ORTHO05D005178 3.1e-32 142.1 109 65.1
A02p37660 Brassica napus HOM05D004459 ORTHO05D005178 3.1e-32 142.1 109 65.1
TAR365G0904 Trochodendron aralioides HOM05D004459 ORTHO05D005178 3.1e-32 142.1 135 59.3
ATR0561G002 Amborella trichopoda HOM05D004459 ORTHO05D005178 4.0e-32 141.7 113 63.7
BcaC06g30774 Brassica carinata HOM05D004459 ORTHO05D005178 4.0e-32 141.7 113 65.5
C07p39300 Brassica napus HOM05D004459 ORTHO05D005178 4.0e-32 141.7 113 65.5
BolC7t44450H Brassica oleracea HOM05D004459 ORTHO05D005178 4.0e-32 141.7 113 65.5
Hma1.2p1_0149F.1_g066510 Hydrangea macrophylla HOM05D004459 ORTHO05D005178 4.0e-32 141.7 116 63.8
AT5G48630 Arabidopsis thaliana HOM05D004459 ORTHO05D005178 5.2e-32 141.4 131 56.5
Thhalv10004803m.g Eutrema salsugineum HOM05D004459 ORTHO05D005178 8.9e-32 140.6 131 55.7
C02p56750 Brassica napus HOM05D004459 ORTHO05D005178 1.2e-31 140.2 109 64.2
BolC2t11743H Brassica oleracea HOM05D004459 ORTHO05D005178 1.2e-31 140.2 109 64.2
A02p37650 Brassica napus HOM05D004459 ORTHO05D005178 2.0e-31 139.4 131 55.0
SMO147G0024 Selaginella moellendorffii HOM05D004459 ORTHO05D005178 2.0e-31 139.4 123 58.5
CARHR183330 Cardamine hirsuta HOM05D004459 ORTHO05D005178 2.6e-31 139.0 131 55.7
AL8G21650 Arabidopsis lyrata HOM05D004459 ORTHO05D005178 3.4e-31 138.7 131 55.0
Sabra02G0187900 Salix brachista HOM05D004459 ORTHO05D005178 3.4e-31 138.7 131 58.8
vmacro14724 Vaccinium macrocarpon HOM05D004459 ORTHO05D005178 3.4e-31 138.7 125 60.8
BcaB07g30037 Brassica carinata HOM05D004459 ORTHO05D005178 4.4e-31 138.3 131 54.2
BcaC03g17667 Brassica carinata HOM05D004459 ORTHO05D005178 4.4e-31 138.3 131 54.2
C02p56740 Brassica napus HOM05D004459 ORTHO05D005178 4.4e-31 138.3 131 54.2
BolC2t11742H Brassica oleracea HOM05D004459 ORTHO05D005178 4.4e-31 138.3 131 54.2
Sp2g19010 Schrenkiella parvula HOM05D004459 ORTHO05D005178 5.8e-31 137.9 113 61.1
Zm00001eb317580 Zea mays HOM05D004459 ORTHO05D005178 5.8e-31 137.9 131 57.3
EL10Ac5g11649 Beta vulgaris HOM05D004459 ORTHO05D005178 1.3e-30 136.7 136 55.1
EL10Ac7g17932 Beta vulgaris HOM05D004459 ORTHO05D005178 1.3e-30 136.7 136 55.1
Os09g0504400 Oryza sativa ssp. japonica HOM05D004459 ORTHO05D005178 1.7e-30 136.3 131 57.3
Aa31LG6G9700 Aethionema arabicum HOM05D004459 ORTHO05D005178 2.2e-30 136.0 113 61.9
Sp2g19020 Schrenkiella parvula HOM05D004459 ORTHO05D005178 4.9e-30 134.8 113 61.9
Mapoly0005s0080 Marchantia polymorpha HOM05D004459 ORTHO05D005178 1.1e-29 133.7 113 61.1
FAN24G3552 Fragaria x ananassa HOM05D004459 ORTHO05D005178 5.4e-29 131.3 124 60.5
ECA236G4121 Erigeron canadensis HOM05D004459 ORTHO05D005178 7.8e-28 127.5 117 59.8
CAN.G874.13 Capsicum annuum HOM05D004459 ORTHO05D005178 1.0e-27 127.1 90 71.1
Pp3c24_1910 Physcomitrium patens HOM05D004459 ORTHO05D005178 1.3e-27 126.7 113 58.4
AUR62016530 Chenopodium quinoa HOM05D004459 ORTHO05D005178 2.3e-27 125.9 99 61.6
VMungo1383G0758 Vigna mungo HOM05D004459 ORTHO05D005178 2.3e-27 125.9 120 58.3
AagrBONN_evm.TU.Sc2ySwM_344.4413 Anthoceros agrestis HOM05D004459 ORTHO05D005178 7.3e-26 120.9 113 57.5
MBI07_g27657_MAGBIO Magnolia biondii HOM05D004459 ORTHO05D005178 2.1e-25 119.4 117 59.0
BraA02t08747Z Brassica rapa HOM05D004459 ORTHO05D005178 2.8e-25 119.0 123 52.8
Ah.08g214750 Amaranthus hybridus HOM05D004459 ORTHO05D005178 6.8e-24 114.4 119 54.6
Pp3c23_12870 Physcomitrium patens HOM05D004459 ORTHO05D005178 8.3e-22 107.5 108 53.7
SHI14518 Sapria himalayana HOM05D004459 ORTHO05D005178 8.3e-22 107.5 118 50.8
Lj2A1122G39 Lonicera japonica HOM05D004459 ORTHO05D005178 6.0e-20 101.3 75 70.7
Hund18441 Selenicereus undatus HOM05D004459 ORTHO05D005178 6.0e-20 101.3 91 60.4
AUR62001146 Chenopodium quinoa HOM05D004459 ORTHO05D005178 3.0e-19 99.0 82 59.8
Duzib133G1079 Durio zibethinus HOM05D004459 ORTHO05D005178 4.7e-17 91.7 70 68.6
Eucgr.H00759 Eucalyptus grandis HOM05D004459 ORTHO05D005178 6.2e-17 91.3 88 56.8
Carub.0008s0830 Capsella rubella HOM05D004459 ORTHO05D005178 5.2e-16 88.2 88 53.4
AL293U10030 Arabidopsis lyrata HOM05D004459 ORTHO05D005178 4.4e-15 85.1 88 51.1
Carub.0005s0820 Capsella rubella HOM05D004459 ORTHO05D005178 4.4e-15 85.1 88 51.1
unitig_60.g25580 Utricularia gibba HOM05D000036 ORTHO05D001038 5.8e-15 84.7 63 68.3
Carub.0005s0821 Capsella rubella HOM05D004459 ORTHO05D005178 1.4e-13 80.1 70 58.6
SGA_v2.0_scaffold104G30089 Striga asiatica HOM05D004459 ORTHO05D005178 3.2e-13 79.0 84 52.4
Lsat_1_v5_gn_3_115720 Lactuca sativa HOM05D004459 ORTHO05D005178 9.2e-13 77.4 60 65.0
SEGI_10334 Sequoiadendron giganteum HOM05D004459 ORTHO05D005178 1.2e-12 77.0 59 67.8
Peaxi162Scf00711g00017 Petunia axillaris HOM05D004459 ORTHO05D005178 1.0e-11 73.9 57 63.2
Cre03.g174476 Chlamydomonas reinhardtii HOM05D004459 ORTHO05D005178 1.3e-11 73.6 101 39.6
TPR.G6416 Trifolium pratense HOM05D004459 ORTHO05D005178 7.3e-10 67.8 71 52.1
Sc05g0001910 Simmondsia chinensis HOM05D004459 ORTHO05D005178 9.6e-10 67.4 72 50.0
Hund22149 Selenicereus undatus HOM05D021542 ORTHO05D005178 1.2e-09 67.0 51 66.7
Hund11162 Selenicereus undatus HOM05D021542 ORTHO05D005178 1.2e-07 60.5 42 69.0
Haze_26318 Corylus avellana HOM05D004459 ORTHO05D005178 2.2e-06 56.2 62 43.5


User provided reference genes

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