Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 6.5e-137 490.7 250 100.0
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 2.7e-50 203.0 251 44.2
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 9.4e-43 177.9 252 42.9
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.2e-42 177.6 232 41.8
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 2.3e-41 173.3 252 40.9
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 3.0e-41 172.9 252 41.7
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 5.1e-41 172.2 251 39.8
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 2.0e-40 170.2 250 38.8
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 2.6e-40 169.9 251 40.6
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 9.7e-40 167.9 252 39.7
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 1.3e-39 167.5 251 37.5
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 1.7e-39 167.2 251 38.2
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 6.3e-39 165.2 251 38.2
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 3.1e-38 162.9 253 39.9
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 3.4e-37 159.5 251 36.7
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 5.9e-37 158.7 251 37.8
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 5.9e-37 158.7 234 41.0
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 1.0e-36 157.9 251 39.8
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.0e-36 157.9 251 39.8
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 1.3e-36 157.5 252 38.9
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 3.8e-36 156.0 251 37.8
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 6.5e-36 155.2 251 40.6
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 8.5e-36 154.8 251 39.4
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.1e-35 154.5 251 39.4
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 1.1e-35 154.5 253 38.3
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 1.9e-35 153.7 253 39.5
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 4.2e-35 152.5 256 37.9
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 1.2e-34 151.0 251 38.6
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 1.2e-34 151.0 252 36.9
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 1.2e-34 151.0 251 37.5
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 1.2e-34 151.0 255 39.6
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 1.6e-34 150.6 253 36.0
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 1.6e-34 150.6 251 36.3
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 3.6e-34 149.4 251 36.7
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 3.6e-34 149.4 251 36.7
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 6.1e-34 148.7 251 35.5
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 7.9e-34 148.3 252 35.3
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 7.9e-34 148.3 251 35.5
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 1.4e-33 147.5 251 35.1
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 1.8e-33 147.1 255 33.7
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 1.8e-33 147.1 249 34.9
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 1.8e-33 147.1 259 34.7
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 1.8e-33 147.1 251 34.7
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 3.0e-33 146.4 251 35.5
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 3.0e-33 146.4 251 35.5
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 3.9e-33 146.0 255 33.3
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 3.9e-33 146.0 251 33.9
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 5.2e-33 145.6 251 34.3
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 2.0e-32 143.7 251 37.1
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 4.4e-32 142.5 251 35.5
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 4.4e-32 142.5 251 35.9
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 7.4e-32 141.7 253 35.2
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 7.4e-32 141.7 251 35.9
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 9.7e-32 141.4 251 34.7
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 1.7e-31 140.6 251 36.3
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 1.7e-31 140.6 251 35.5
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 2.2e-31 140.2 251 36.3
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 2.2e-31 140.2 251 36.3
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 2.8e-31 139.8 253 34.0
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 6.3e-31 138.7 253 36.4
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 6.3e-31 138.7 251 34.7
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 1.4e-30 137.5 252 35.3
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 3.1e-30 136.3 207 41.1
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 9.1e-30 134.8 251 34.3
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 1.6e-29 134.0 251 32.3
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 3.5e-29 132.9 208 36.5
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 3.5e-29 132.9 252 32.1
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 1.0e-28 131.3 251 33.5
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 1.3e-28 131.0 274 34.3
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 1.3e-28 131.0 252 34.9
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 3.8e-28 129.4 213 34.7
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 1.1e-27 127.9 190 41.6
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 1.5e-27 127.5 251 33.5
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 9.4e-27 124.8 176 40.9
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 1.2e-26 124.4 251 32.7
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 1.2e-26 124.4 251 33.5
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 8.0e-26 121.7 210 36.7
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 1.2e-24 117.9 303 28.7
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 9.7e-24 114.8 177 40.1
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 1.3e-23 114.4 239 34.3
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 4.8e-23 112.5 172 39.5
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 4.8e-23 112.5 252 32.1
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 7.0e-22 108.6 231 33.8
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.0e-20 104.8 246 30.5
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 8.5e-20 101.7 218 31.7
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 4.2e-19 99.4 221 32.6
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 4.7e-18 95.9 154 35.1
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 4.7e-18 95.9 179 33.5
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.2e-16 91.3 147 38.1
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 7.0e-14 82.0 207 30.0
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 1.7e-12 77.4 243 27.2
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 5.0e-12 75.9 207 25.6
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 3.7e-07 59.7 100 35.0


User provided reference genes

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