Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 2.5e-84 315.5 164 100.0
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 6.7e-74 280.8 164 89.0
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 6.4e-40 167.9 157 56.1
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.0e-38 162.9 117 67.5
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 1.7e-37 159.8 155 57.4
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 3.9e-37 158.7 147 57.8
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 1.9e-36 156.4 129 64.3
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 2.5e-36 156.0 158 55.1
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 3.3e-36 155.6 124 65.3
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 7.3e-36 154.5 123 65.0
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 9.5e-36 154.1 128 60.9
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.2e-35 153.7 116 65.5
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.6e-35 153.3 121 64.5
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 4.7e-35 151.8 123 64.2
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 1.4e-34 150.2 114 64.9
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 1.8e-34 149.8 123 61.8
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 6.8e-34 147.9 120 64.2
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 6.8e-34 147.9 120 64.2
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 6.8e-34 147.9 168 52.4
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 8.9e-34 147.5 123 61.0
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 1.2e-33 147.1 159 50.9
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 1.5e-33 146.7 139 55.4
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 1.5e-33 146.7 162 50.6
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 2.6e-33 146.0 120 63.3
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 3.4e-33 145.6 120 64.2
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 4.4e-33 145.2 156 50.6
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 5.8e-33 144.8 130 57.7
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 7.5e-33 144.4 156 50.6
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 1.3e-32 143.7 113 65.5
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 1.3e-32 143.7 120 61.7
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.7e-32 143.3 131 57.3
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 1.7e-32 143.3 158 51.3
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 2.2e-32 142.9 156 51.3
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 2.2e-32 142.9 157 49.0
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 3.7e-32 142.1 157 49.7
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 3.7e-32 142.1 157 49.7
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 4.9e-32 141.7 117 61.5
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 4.9e-32 141.7 132 59.8
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 6.4e-32 141.4 159 50.3
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 8.3e-32 141.0 161 54.7
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 1.1e-31 140.6 152 53.3
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 1.4e-31 140.2 159 49.7
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 1.4e-31 140.2 116 62.9
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 1.9e-31 139.8 157 49.0
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 4.1e-31 138.7 159 49.7
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 3.5e-30 135.6 128 57.0
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 1.0e-29 134.0 121 59.5
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 1.3e-29 133.7 110 60.9
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 1.3e-29 133.7 118 55.9
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.7e-29 133.3 126 59.5
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.3e-29 132.9 117 58.1
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.3e-29 132.9 117 58.1
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.3e-29 132.9 117 58.1
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.3e-29 132.9 117 58.1
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.9e-29 132.1 117 58.1
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.9e-29 132.1 117 57.3
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.3e-28 128.6 117 56.4
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 6.2e-27 124.8 259 34.7
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 5.2e-26 121.7 86 70.9
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.7e-24 116.7 117 55.6
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.9e-24 115.9 117 55.6
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 8.3e-24 114.4 111 48.6
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 8.3e-24 114.4 111 48.6
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 1.9e-23 113.2 83 65.1
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 2.7e-22 109.4 157 42.7
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 7.8e-22 107.8 141 46.8
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 5.8e-17 91.7 65 67.7
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 1.1e-15 87.4 57 70.2
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 4.6e-14 82.0 104 45.2
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 3.3e-12 75.9 58 67.2
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 3.6e-11 72.4 107 42.1
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 1.8e-10 70.1 96 43.8
Ca_06312_v3 Cicer arietinum L. HOM05D004888 ORTHO05D005792 4.6e-06 55.5 87 35.6
Phvul.008G266100 Phaseolus vulgaris HOM05D004888 ORTHO05D005792 7.8e-06 54.7 88 37.5


User provided reference genes

Program Settings