Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0329 Ceratophyllum demersum HOM05D006385 ORTHO05D007948 3.4e-181 638.3 333 100.0
Nn3g19220 Nelumbo nucifera HOM05D006385 ORTHO05D007948 2.5e-123 446.0 352 68.5
CANSAT25G3491 Cannabis sativa HOM05D006385 ORTHO05D007948 2.3e-121 439.5 346 69.7
Thecc.08G102700 Theobroma cacao HOM05D006385 ORTHO05D007948 8.7e-121 437.6 351 68.9
Duzib093G1818 Durio zibethinus HOM05D006385 ORTHO05D007948 2.5e-120 436.0 315 73.0
GSVIVG01009079001 Vitis vinifera HOM05D006385 ORTHO05D007948 5.7e-120 434.9 346 67.3
Manes.18G064300 Manihot esculenta HOM05D006385 ORTHO05D007948 7.4e-120 434.5 348 67.2
Hma1.2p1_0593F.1_g185660 Hydrangea macrophylla HOM05D006385 ORTHO05D007948 1.3e-119 433.7 350 68.0
CSS0041418 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 1.6e-119 433.3 352 66.8
Prupe.1G522500 Prunus persica HOM05D006385 ORTHO05D007948 1.4e-118 430.3 349 65.9
Atru.chr13.1121 Acer truncatum HOM05D006385 ORTHO05D007948 5.3e-118 428.3 347 66.9
Medtr5g064610 Medicago truncatula HOM05D006385 ORTHO05D007948 9.0e-118 427.6 352 68.5
CiPaw.16G033200 Carya illinoinensis HOM05D006385 ORTHO05D007948 2.6e-117 426.0 354 65.5
Ciclev10001685m.g Citrus clementina HOM05D006385 ORTHO05D007948 3.4e-117 425.6 349 66.2
TAR629G0260 Trochodendron aralioides HOM05D006385 ORTHO05D007948 3.4e-117 425.6 353 64.9
Potri.005G161900 Populus trichocarpa HOM05D006385 ORTHO05D007948 4.5e-117 425.2 347 67.7
EL10Ac1g01150 Beta vulgaris HOM05D006385 ORTHO05D007948 5.9e-117 424.9 348 67.2
Gohir.A06G033800 Gossypium hirsutum HOM05D006385 ORTHO05D007948 2.2e-116 422.9 355 66.2
AUR62027809 Chenopodium quinoa HOM05D006385 ORTHO05D007948 3.8e-116 422.2 357 66.1
Ca_05312_v3 Cicer arietinum L. HOM05D006385 ORTHO05D007948 3.8e-116 422.2 350 66.3
COL.COLO4_12014 Corchorus olitorius HOM05D006385 ORTHO05D007948 5.0e-116 421.8 350 66.9
Aqoxy3G02613 Aquilegia oxysepala HOM05D006385 ORTHO05D007948 8.5e-116 421.0 354 66.7
Ah.05g169700 Amaranthus hybridus HOM05D006385 ORTHO05D007948 1.4e-115 420.2 353 65.7
QL02p002520 Quercus lobata HOM05D006385 ORTHO05D007948 3.2e-115 419.1 349 65.0
Sc23g0000390 Simmondsia chinensis HOM05D006385 ORTHO05D007948 3.2e-115 419.1 344 66.3
Peaxi162Scf00030g02222 Petunia axillaris HOM05D006385 ORTHO05D007948 9.4e-115 417.5 348 68.4
MD15G1373900 Malus domestica HOM05D006385 ORTHO05D007948 1.2e-114 417.2 347 64.6
Gohir.D06G034700 Gossypium hirsutum HOM05D006385 ORTHO05D007948 1.6e-114 416.8 353 65.4
TPR.G31376 Trifolium pratense HOM05D006385 ORTHO05D007948 4.6e-114 415.2 350 66.6
FvH4_5g36620 Fragaria vesca HOM05D006385 ORTHO05D007948 1.4e-113 413.7 347 63.7
TWI56G0191 Tripterygium wilfordii HOM05D006385 ORTHO05D007948 1.8e-113 413.3 346 65.6
QL02p002481 Quercus lobata HOM05D006385 ORTHO05D007948 2.3e-113 412.9 348 63.2
RcHm_v2.0_Chr7g0242391 Rosa chinensis HOM05D006385 ORTHO05D007948 2.3e-113 412.9 347 64.0
AT4G09010 Arabidopsis thaliana HOM05D006385 ORTHO05D007948 3.0e-113 412.5 347 65.4
BcaB01g02829 Brassica carinata HOM05D006385 ORTHO05D007948 3.0e-113 412.5 347 65.4
CSS0028326 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 1.1e-112 410.6 349 65.3
Aa31LG9G14680 Aethionema arabicum HOM05D006385 ORTHO05D007948 2.0e-112 409.8 346 65.3
Eucgr.F00373 Eucalyptus grandis HOM05D006385 ORTHO05D007948 2.0e-112 409.8 354 62.7
BolC3t15735H Brassica oleracea HOM05D006385 ORTHO05D007948 2.5e-112 409.5 348 65.2
Glyma.14G177200 Glycine max HOM05D006385 ORTHO05D007948 3.3e-112 409.1 347 64.6
Gorai.010G038200 Gossypium raimondii HOM05D006385 ORTHO05D007948 4.3e-112 408.7 387 61.2
PSO063G4930 Papaver somniferum HOM05D006385 ORTHO05D007948 4.3e-112 408.7 351 65.0
PGR042G2954 Punica granatum HOM05D006385 ORTHO05D007948 4.3e-112 408.7 359 63.8
BcaC01g04743 Brassica carinata HOM05D006385 ORTHO05D007948 5.7e-112 408.3 348 65.2
BraA03t12039Z Brassica rapa HOM05D006385 ORTHO05D007948 7.4e-112 407.9 348 65.2
Carub.0006s2759 Capsella rubella HOM05D006385 ORTHO05D007948 9.7e-112 407.5 347 66.0
FAN08G3484 Fragaria x ananassa HOM05D000076 ORTHO05D002730 1.3e-111 407.1 347 62.8
VMungo0647G2510 Vigna mungo HOM05D006385 ORTHO05D007948 1.3e-111 407.1 347 64.3
CsaV3_3G047650 Cucumis sativus L. HOM05D006385 ORTHO05D007948 2.2e-111 406.4 351 63.5
Lj4A97T74 Lonicera japonica HOM05D006385 ORTHO05D007948 2.2e-111 406.4 346 63.6
Sabra05G0122400 Salix brachista HOM05D000076 ORTHO05D007948 2.2e-111 406.4 367 62.4
Rhsim07G0205000 Rhododendron simsii HOM05D006385 ORTHO05D007948 3.7e-111 405.6 346 63.3
arahy.Tifrunner.gnm1.ann1.5I6DN4 Arachis hypogaea HOM05D006385 ORTHO05D007948 4.8e-111 405.2 353 64.0
AUR62018967 Chenopodium quinoa HOM05D006385 ORTHO05D007948 4.8e-111 405.2 283 75.3
SalBow7G0771 Salvia bowleyana HOM05D006385 ORTHO05D007948 4.8e-111 405.2 346 63.3
Thhalv10028739m.g Eutrema salsugineum HOM05D006385 ORTHO05D007948 6.3e-111 404.8 348 65.2
Lj1g0021451 Lotus japonicus HOM05D006385 ORTHO05D007948 8.2e-111 404.4 347 65.4
CSS0032215 Camellia sinensis var. sinensis HOM05D006385 ORTHO05D007948 6.9e-110 401.4 350 65.4
vmacro04711 Vaccinium macrocarpon HOM05D006385 ORTHO05D007948 6.9e-110 401.4 386 60.4
C03p34260 Brassica napus HOM05D006385 ORTHO05D007948 1.2e-109 400.6 374 60.7
CARHR260020 Cardamine hirsuta HOM05D006385 ORTHO05D007948 1.5e-109 400.2 349 64.8
ECA247G1006 Erigeron canadensis HOM05D006385 ORTHO05D007948 2.0e-109 399.8 355 63.4
A03p28350 Brassica napus HOM05D006385 ORTHO05D007948 2.6e-109 399.4 374 60.7
HanXRQChr05g0149631 Helianthus annuus HOM05D006385 ORTHO05D007948 3.4e-109 399.1 351 64.4
Sed0018010 Sechium edule HOM05D006385 ORTHO05D007948 5.9e-109 398.3 352 63.6
PGSC0003DMG400030834 Solanum tuberosum HOM05D006385 ORTHO05D007948 7.7e-109 397.9 346 64.2
PSO782G1429 Papaver somniferum HOM05D006385 ORTHO05D007948 1.0e-108 397.5 351 63.8
Hund16889 Selenicereus undatus HOM05D006385 ORTHO05D007948 2.2e-108 396.4 297 70.0
DCAR_012886 Daucus carota HOM05D006385 ORTHO05D007948 5.0e-108 395.2 346 62.1
Nitab4.5_0010488g0040 Nicotiana tabacum HOM05D006385 ORTHO05D007948 6.5e-108 394.8 346 64.5
Sopen04g029620 Solanum pennellii HOM05D006385 ORTHO05D007948 6.5e-108 394.8 346 63.9
Lsat_1_v5_gn_1_3240 Lactuca sativa HOM05D006385 ORTHO05D007948 8.5e-108 394.4 352 63.9
Solyc04g074640.4 Solanum lycopersicum HOM05D006385 ORTHO05D007948 8.5e-108 394.4 346 63.6
Zm00001eb071800 Zea mays HOM05D006385 ORTHO05D007948 1.4e-107 393.7 318 67.0
CAN.G857.10 Capsicum annuum HOM05D006385 ORTHO05D007948 2.5e-107 392.9 347 63.4
HPP92_021090 Vanilla planifolia HOM05D006385 ORTHO05D007948 4.2e-107 392.1 288 71.2
ClCG11G014260 Citrullus lanatus HOM05D006385 ORTHO05D007948 5.5e-107 391.7 408 56.1
Lalb_Chr17g0344281 Lupinus albus HOM05D006385 ORTHO05D007948 7.2e-107 391.3 347 62.5
Os04g0602100 Oryza sativa ssp. japonica HOM05D006385 ORTHO05D007948 7.2e-107 391.3 353 62.3
Migut.C00083 Erythranthe guttata HOM05D006385 ORTHO05D007948 9.4e-107 391.0 351 62.1
THA.LOC104813110 Tarenaya hassleriana HOM05D006385 ORTHO05D007948 4.7e-106 388.7 347 62.0
Nitab4.5_0000786g0090 Nicotiana tabacum HOM05D006385 ORTHO05D007948 6.1e-106 388.3 346 64.2
MSTRG.24988 Avicennia marina HOM05D006385 ORTHO05D007948 7.9e-106 387.9 350 61.7
Glyma.02G209000 Glycine max HOM05D006385 ORTHO05D007948 1.3e-103 380.6 283 71.4
unitig_578.g16554 Utricularia gibba HOM05D006385 ORTHO05D007948 1.7e-103 380.2 343 62.7
Sp6g08630 Schrenkiella parvula HOM05D006385 ORTHO05D007948 6.3e-103 378.3 275 73.1
AL6G41510 Arabidopsis lyrata HOM05D006385 ORTHO05D007948 1.8e-102 376.7 287 70.4
Haze_18272 Corylus avellana HOM05D006385 ORTHO05D007948 5.3e-102 375.2 349 59.6
Haze_18276 Corylus avellana HOM05D006385 ORTHO05D007948 7.0e-102 374.8 349 59.6
Phvul.008G176700 Phaseolus vulgaris HOM05D006385 ORTHO05D007948 1.5e-101 373.6 272 70.2
arahy.Tifrunner.gnm1.ann1.A6MVZL Arachis hypogaea HOM05D006385 ORTHO05D007948 2.0e-101 373.2 365 59.5
Cc10_g06720 Coffea canephora HOM05D006385 ORTHO05D007948 1.8e-94 350.1 315 61.3
ATR0829G184 Amborella trichopoda HOM05D006385 ORTHO05D007948 1.0e-92 344.4 254 70.1
Oeu029745.1 Olea europaea HOM05D006385 ORTHO05D007948 2.9e-92 342.8 330 60.0
Cfa017889 Carpinus fangiana HOM05D006385 ORTHO05D007948 1.1e-91 340.9 352 55.7
Actinidia37405 Actinidia chinensis HOM05D006385 ORTHO05D007948 1.6e-90 337.0 352 56.5
Actinidia33123 Actinidia chinensis HOM05D006385 ORTHO05D007948 4.7e-90 335.5 352 56.2
SGA_v2.0_scaffold69G23149 Striga asiatica HOM05D006385 ORTHO05D007948 1.3e-84 317.4 328 56.1
Dinv07071 Davidia involucrata HOM05D006385 ORTHO05D007948 2.0e-80 303.5 278 61.5
SMO331G0009 Selaginella moellendorffii HOM05D006385 ORTHO05D007948 7.5e-80 301.6 268 59.7
Pp3c1_18860 Physcomitrium patens HOM05D006385 ORTHO05D007948 6.3e-79 298.5 295 54.9
Mapoly0019s0014 Marchantia polymorpha HOM05D006385 ORTHO05D007948 3.1e-78 296.2 328 51.5
Pp3c2_15430 Physcomitrium patens HOM05D006385 ORTHO05D007948 7.0e-78 295.0 295 54.2
FAN04G3219 Fragaria x ananassa HOM05D006385 ORTHO05D007948 9.1e-78 294.7 296 56.8
Cpa.g.sc36.176 Carica papaya HOM05D006385 ORTHO05D007948 8.0e-74 281.6 227 65.6
AagrBONN_evm.TU.Sc2ySwM_368.1614 Anthoceros agrestis HOM05D006385 ORTHO05D007948 1.0e-73 281.2 267 54.3
MELO3C003559.2 Cucumis melo HOM05D006385 ORTHO05D007948 1.7e-71 273.9 269 57.6
vmacro04724 Vaccinium macrocarpon HOM05D006385 ORTHO05D007948 2.7e-69 266.5 284 53.9
CBR_g39625 Chara braunii HOM05D006385 ORTHO05D007948 2.1e-66 256.9 339 46.3
RcHm_v2.0_Chr7g0242491 Rosa chinensis HOM05D006385 ORTHO05D007948 4.4e-56 222.6 222 54.1
Psat2g069720 Pisum sativum HOM05D006385 ORTHO05D007948 7.1e-54 215.3 224 57.6
FAN04G2677 Fragaria x ananassa HOM05D006385 ORTHO05D007948 3.0e-52 209.9 128 80.5
RcHm_v2.0_Chr7g0242541 Rosa chinensis HOM05D006385 ORTHO05D007948 1.7e-44 184.1 185 58.4
FAN04G2124 Fragaria x ananassa HOM05D006385 ORTHO05D007948 2.4e-38 163.7 96 83.3
Dinv44802 Davidia involucrata HOM05D006385 ORTHO05D007948 3.5e-29 133.3 78 80.8
Lsat_1_v5_gn_3_128800 Lactuca sativa HOM05D006385 ORTHO05D007948 1.1e-27 128.3 191 45.5
Lsat_1_v5_gn_1_92961 Lactuca sativa HOM05D006385 ORTHO05D007948 5.6e-27 125.9 158 50.0
Lsat_1_v5_gn_5_37701 Lactuca sativa HOM05D006385 ORTHO05D007948 2.1e-26 124.0 202 45.0
RcHm_v2.0_Chr7g0242431 Rosa chinensis HOM05D006385 ORTHO05D007948 2.2e-23 114.0 101 65.3
FAN04G3079 Fragaria x ananassa HOM05D006385 ORTHO05D007948 3.5e-21 106.7 63 81.0
FAN04G2113 Fragaria x ananassa HOM05D000076 ORTHO05D002730 9.0e-17 92.0 201 35.3
Dinv44803 Davidia involucrata HOM05D006385 ORTHO05D007948 8.4e-15 85.5 47 85.1
Cc10_g06730 Coffea canephora HOM05D006385 ORTHO05D007948 5.3e-09 66.2 37 89.2
SGA_v2.0_scaffold105G30294 Striga asiatica HOM05D006385 ORTHO05D007948 5.3e-09 66.2 44 72.7
Cre05.g233900 Chlamydomonas reinhardtii HOM05D006385 ORTHO05D007948 5.8e-08 62.8 348 27.9


User provided reference genes

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