Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0326 Ceratophyllum demersum HOM05D007450 ORTHO05D009377 4.3e-47 191.0 101 100.0
Rhsim07G0130700 Rhododendron simsii HOM05D007450 ORTHO05D009377 5.1e-16 87.8 95 52.6
HPP92_001521 Vanilla planifolia HOM05D007450 ORTHO05D009377 5.1e-16 87.8 90 54.4
PGR031G1038 Punica granatum HOM05D007450 ORTHO05D009377 8.8e-16 87.0 86 57.0
Manes.14G162800 Manihot esculenta HOM05D007450 ORTHO05D009377 2.0e-15 85.9 87 56.3
Aqoxy3G02217 Aquilegia oxysepala HOM05D007450 ORTHO05D009377 2.6e-15 85.5 74 54.1
CSS0005314 Camellia sinensis var. sinensis HOM05D007450 ORTHO05D009377 4.4e-15 84.7 95 49.5
GSVIVG01013568001 Vitis vinifera HOM05D007450 ORTHO05D009377 4.4e-15 84.7 86 57.0
CiPaw.11G096800 Carya illinoinensis HOM05D007450 ORTHO05D009377 5.7e-15 84.3 85 56.5
Cfa012487 Carpinus fangiana HOM05D007450 ORTHO05D009377 7.4e-15 84.0 85 55.3
HanXRQChr13g0395471 Helianthus annuus HOM05D007450 ORTHO05D009377 9.7e-15 83.6 98 48.0
PSO063G4138 Papaver somniferum HOM05D007450 ORTHO05D009377 1.3e-14 83.2 93 51.6
Dinv25243 Davidia involucrata HOM05D007450 ORTHO05D009377 1.7e-14 82.8 99 49.5
Potri.001G138700 Populus trichocarpa HOM05D007450 ORTHO05D009377 1.7e-14 82.8 81 54.3
QL12p004405 Quercus lobata HOM05D007450 ORTHO05D009377 2.2e-14 82.4 91 50.5
Sabra01G0107700 Salix brachista HOM05D007450 ORTHO05D009377 2.2e-14 82.4 81 54.3
Thecc.03G307400 Theobroma cacao HOM05D007450 ORTHO05D009377 2.2e-14 82.4 86 55.8
TAR629G3037 Trochodendron aralioides HOM05D007450 ORTHO05D009377 2.2e-14 82.4 90 52.2
Dinv28985 Davidia involucrata HOM05D007450 ORTHO05D009377 2.8e-14 82.0 86 53.5
Nitab4.5_0000353g0070 Nicotiana tabacum HOM05D007450 ORTHO05D009377 2.8e-14 82.0 94 50.0
Actinidia09178 Actinidia chinensis HOM05D007450 ORTHO05D009377 3.7e-14 81.6 86 54.7
Actinidia14787 Actinidia chinensis HOM05D007450 ORTHO05D009377 4.8e-14 81.3 86 55.8
Gohir.A12G207000 Gossypium hirsutum HOM05D007450 ORTHO05D009377 4.8e-14 81.3 87 55.2
PSO782G2764 Papaver somniferum HOM05D007450 ORTHO05D009377 4.8e-14 81.3 93 50.5
Cc08_g03220 Coffea canephora HOM05D007450 ORTHO05D009377 6.3e-14 80.9 88 53.4
Lsat_1_v5_gn_6_1640 Lactuca sativa HOM05D007450 ORTHO05D009377 6.3e-14 80.9 98 46.9
Ciclev10018330m.g Citrus clementina HOM05D007450 ORTHO05D009377 8.2e-14 80.5 84 54.8
ATR0829G039 Amborella trichopoda HOM05D007450 ORTHO05D009377 1.1e-13 80.1 92 54.3
Potri.003G095100 Populus trichocarpa HOM05D007450 ORTHO05D009377 1.4e-13 79.7 56 66.1
DCAR_008242 Daucus carota HOM05D007450 ORTHO05D009377 1.8e-13 79.3 86 54.7
vmacro14189 Vaccinium macrocarpon HOM05D007450 ORTHO05D009377 1.8e-13 79.3 92 48.9
PGSC0003DMG400014800 Solanum tuberosum HOM05D007450 ORTHO05D009377 2.4e-13 79.0 87 51.7
Lj2g0017142 Lotus japonicus HOM05D007450 ORTHO05D009377 4.1e-13 78.2 85 51.8
Medtr5g029660 Medicago truncatula HOM05D007450 ORTHO05D009377 4.1e-13 78.2 85 50.6
Gohir.D12G209400 Gossypium hirsutum HOM05D007450 ORTHO05D009377 7.0e-13 77.4 55 65.5
Nitab4.5_0000685g0040 Nicotiana tabacum HOM05D007450 ORTHO05D009377 7.0e-13 77.4 86 51.2
FAN08G0787 Fragaria x ananassa HOM05D007450 ORTHO05D009377 9.1e-13 77.0 88 53.4
Gorai.008G225000 Gossypium raimondii HOM05D007450 ORTHO05D009377 9.1e-13 77.0 92 48.9
ECA233G1068 Erigeron canadensis HOM05D007450 ORTHO05D009377 1.2e-12 76.6 98 45.9
FAN04G2147 Fragaria x ananassa HOM05D007450 ORTHO05D009377 1.2e-12 76.6 88 53.4
Sopen08g025140 Solanum pennellii HOM05D007450 ORTHO05D009377 1.2e-12 76.6 87 51.7
RcHm_v2.0_Chr7g0211351 Rosa chinensis HOM05D007450 ORTHO05D009377 1.6e-12 76.3 88 53.4
MSTRG.1994 Avicennia marina HOM05D007450 ORTHO05D009377 2.0e-12 75.9 94 42.6
Psat2g138000 Pisum sativum HOM05D007450 ORTHO05D009377 2.6e-12 75.5 85 49.4
Duzib205G1651 Durio zibethinus HOM05D007450 ORTHO05D009377 3.5e-12 75.1 86 48.8
FvH4_5g22750 Fragaria vesca HOM05D007450 ORTHO05D009377 3.5e-12 75.1 88 52.3
FAN18G1197 Fragaria x ananassa HOM05D007450 ORTHO05D009377 3.5e-12 75.1 88 52.3
FAN18G1518 Fragaria x ananassa HOM05D007450 ORTHO05D009377 3.5e-12 75.1 88 52.3
Solyc08g076580.3 Solanum lycopersicum HOM05D007450 ORTHO05D009377 3.5e-12 75.1 87 51.7
FAN13G0277 Fragaria x ananassa HOM05D007450 ORTHO05D009377 4.5e-12 74.7 91 50.5
FAN13G1033 Fragaria x ananassa HOM05D007450 ORTHO05D009377 4.5e-12 74.7 91 50.5
Glyma.09G206700 Glycine max HOM05D007450 ORTHO05D009377 5.9e-12 74.3 65 60.0
CAN.G298.58 Capsicum annuum HOM05D007450 ORTHO05D009377 7.7e-12 73.9 87 51.7
Peaxi162Scf00879g00221 Petunia axillaris HOM05D007450 ORTHO05D009377 7.7e-12 73.9 95 47.4
Ca_08150_v3 Cicer arietinum L. HOM05D007450 ORTHO05D009377 1.0e-11 73.6 87 48.3
Glyma.01G015700 Glycine max HOM05D007450 ORTHO05D009377 1.0e-11 73.6 65 60.0
Peaxi162Scf00170g00915 Petunia axillaris HOM05D007450 ORTHO05D009377 1.7e-11 72.8 96 45.8
Peaxi162Scf00170g01010 Petunia axillaris HOM05D007450 ORTHO05D009377 1.7e-11 72.8 94 46.8
THA.LOC104798592 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 1.7e-11 72.8 55 60.0
Aa31LG2G13720 Aethionema arabicum HOM05D007450 ORTHO05D009377 2.9e-11 72.0 55 60.0
CANSAT21G1074 Cannabis sativa HOM05D007450 ORTHO05D009377 2.9e-11 72.0 55 61.8
Atru.chr6.1639 Acer truncatum HOM05D007450 ORTHO05D009377 3.8e-11 71.6 55 60.0
Eucgr.E00251 Eucalyptus grandis HOM05D007450 ORTHO05D009377 3.8e-11 71.6 87 47.1
TPR.G8094 Trifolium pratense HOM05D007450 ORTHO05D009377 6.5e-11 70.9 87 48.3
Thhalv10009436m.g Eutrema salsugineum HOM05D007450 ORTHO05D009377 8.5e-11 70.5 55 56.4
Zm00001eb024740 Zea mays HOM05D007450 ORTHO05D009377 8.5e-11 70.5 57 57.9
MELO3C003430.2 Cucumis melo HOM05D007450 ORTHO05D009377 1.5e-10 69.7 84 45.2
Prupe.5G030900 Prunus persica HOM05D007450 ORTHO05D009377 1.5e-10 69.7 87 50.6
SHI36446 Sapria himalayana HOM05D007450 ORTHO05D009377 1.5e-10 69.7 54 63.0
Carub.0001s3064 Capsella rubella HOM05D007450 ORTHO05D009377 1.9e-10 69.3 87 46.0
AT1G32310 Arabidopsis thaliana HOM05D007450 ORTHO05D009377 2.5e-10 68.9 87 46.0
CARHR031660 Cardamine hirsuta HOM05D007450 ORTHO05D009377 2.5e-10 68.9 87 46.0
ClCG09G011730 Citrullus lanatus HOM05D007450 ORTHO05D009377 2.5e-10 68.9 85 44.7
Lalb_Chr05g0215841 Lupinus albus HOM05D007450 ORTHO05D009377 2.5e-10 68.9 48 62.5
arahy.Tifrunner.gnm1.ann1.UE78BX Arachis hypogaea HOM05D007450 ORTHO05D009377 3.2e-10 68.6 91 45.1
arahy.Tifrunner.gnm1.ann1.XXZI65 Arachis hypogaea HOM05D007450 ORTHO05D009377 3.2e-10 68.6 91 45.1
EL10Ac5g12043 Beta vulgaris HOM05D007450 ORTHO05D009377 3.2e-10 68.6 90 48.9
THA.LOC104808475 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 3.2e-10 68.6 84 46.4
VMungo1215G2816 Vigna mungo HOM05D007450 ORTHO05D009377 4.2e-10 68.2 85 49.4
Sed0003049 Sechium edule HOM05D007450 ORTHO05D009377 5.5e-10 67.8 85 45.9
Sed0022287 Sechium edule HOM05D007450 ORTHO05D009377 7.2e-10 67.4 85 43.5
Haze_08178 Corylus avellana HOM05D007450 ORTHO05D009377 1.6e-09 66.2 121 38.8
BraA05t21386Z Brassica rapa HOM05D007450 ORTHO05D009377 2.7e-09 65.5 55 56.4
Sp1g27980 Schrenkiella parvula HOM05D007450 ORTHO05D009377 2.7e-09 65.5 86 44.2
Lalb_Chr16g0381181 Lupinus albus HOM05D007450 ORTHO05D009377 3.6e-09 65.1 70 51.4
A05p25040 Brassica napus HOM05D007450 ORTHO05D009377 4.7e-09 64.7 55 54.5
BcaC05g27880 Brassica carinata HOM05D007450 ORTHO05D009377 1.0e-08 63.5 55 52.7
C05p38880 Brassica napus HOM05D007450 ORTHO05D009377 1.0e-08 63.5 55 52.7
BolC5t32629H Brassica oleracea HOM05D007450 ORTHO05D009377 1.0e-08 63.5 55 52.7
Os10g0575950 Oryza sativa ssp. japonica HOM05D007450 ORTHO05D009377 1.0e-08 63.5 85 45.9
AUR62018673 Chenopodium quinoa HOM05D007450 ORTHO05D009377 1.8e-08 62.8 80 51.2
SalBow1G6923 Salvia bowleyana HOM05D007450 ORTHO05D009377 2.3e-08 62.4 50 54.0
Hund11210 Selenicereus undatus HOM05D007450 ORTHO05D009377 2.3e-08 62.4 73 52.1
BcaB03g13745 Brassica carinata HOM05D007450 ORTHO05D009377 8.8e-08 60.5 54 51.9
Sc01g0007300 Simmondsia chinensis HOM05D007450 ORTHO05D009377 1.1e-07 60.1 39 71.8
MD06G1038000 Malus domestica HOM05D007450 ORTHO05D009377 4.4e-07 58.2 51 54.9
Phvul.002G138300 Phaseolus vulgaris HOM05D007450 ORTHO05D009377 9.7e-07 57.0 63 52.4
Mapoly0093s0046 Marchantia polymorpha HOM05D028885 ORTHO05D028706 4.8e-06 54.7 84 42.9
CsaV3_3G048930 Cucumis sativus L. HOM05D007450 ORTHO05D009377 8.2e-06 53.9 35 65.7


User provided reference genes

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