Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 9.7e-107 390.2 201 100.0
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 1.9e-33 146.7 90 83.3
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 1.5e-14 84.0 85 56.5
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 2.5e-14 83.2 102 49.0
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 9.6e-14 81.3 97 49.5
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 4.0e-12 75.9 102 48.0
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 5.3e-12 75.5 45 75.6
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 6.9e-12 75.1 86 53.5
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 2.6e-11 73.2 93 46.2
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 1.7e-10 70.5 99 42.4
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 1.7e-10 70.5 75 52.0
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 2.2e-10 70.1 48 66.7
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 2.2e-10 70.1 96 45.8
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 2.2e-10 70.1 109 42.2
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 2.2e-10 70.1 79 49.4
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 2.9e-10 69.7 57 63.2
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 3.8e-10 69.3 37 81.1
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 3.8e-10 69.3 79 51.9
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 3.8e-10 69.3 50 66.0
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 3.8e-10 69.3 70 48.6
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 4.9e-10 68.9 93 43.0
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 6.4e-10 68.6 37 78.4
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 8.4e-10 68.2 97 46.4
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 1.1e-09 67.8 63 50.8
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 1.1e-09 67.8 81 48.1
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.4e-09 67.4 37 78.4
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.4e-09 67.4 37 78.4
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.4e-09 67.4 37 78.4
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.4e-09 67.4 92 46.7
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.9e-09 67.0 92 46.7
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 1.9e-09 67.0 92 46.7
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 1.9e-09 67.0 37 75.7
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 1.9e-09 67.0 75 52.0
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 2.4e-09 66.6 85 47.1
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 2.4e-09 66.6 66 50.0
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 3.2e-09 66.2 57 56.1
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 3.2e-09 66.2 37 75.7
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 3.2e-09 66.2 81 48.1
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 4.2e-09 65.9 39 74.4
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 4.2e-09 65.9 39 74.4
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 4.2e-09 65.9 36 77.8
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 4.2e-09 65.9 37 75.7
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 4.2e-09 65.9 100 48.0
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 4.2e-09 65.9 100 48.0
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 5.4e-09 65.5 61 62.3
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 5.4e-09 65.5 75 52.0
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 5.4e-09 65.5 39 74.4
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 7.1e-09 65.1 104 43.3
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 9.3e-09 64.7 44 65.9
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 9.3e-09 64.7 44 65.9
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 9.3e-09 64.7 75 50.7
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 9.3e-09 64.7 72 45.8
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 1.2e-08 64.3 36 75.0
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 1.2e-08 64.3 36 75.0
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 1.2e-08 64.3 37 73.0
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 1.2e-08 64.3 48 60.4
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 1.2e-08 64.3 78 44.9
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 1.2e-08 64.3 83 45.8
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 1.6e-08 63.9 40 72.5
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 1.6e-08 63.9 75 49.3
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 1.6e-08 63.9 91 44.0
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.6e-08 63.9 79 45.6
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 2.1e-08 63.5 44 63.6
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 2.1e-08 63.5 82 47.6
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 2.1e-08 63.5 44 63.6
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.1e-08 63.5 104 42.3
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 2.7e-08 63.2 38 71.1
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 2.7e-08 63.2 76 51.3
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 3.5e-08 62.8 95 41.1
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 3.5e-08 62.8 98 39.8
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 3.5e-08 62.8 51 58.8
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 3.5e-08 62.8 122 35.2
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 4.6e-08 62.4 38 71.1
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 4.6e-08 62.4 94 42.6
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 4.6e-08 62.4 94 42.6
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 6.0e-08 62.0 94 42.6
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 6.0e-08 62.0 94 42.6
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 6.0e-08 62.0 37 73.0
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 7.9e-08 61.6 75 46.7
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 7.9e-08 61.6 37 73.0
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 7.9e-08 61.6 44 65.9
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 7.9e-08 61.6 81 50.6
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 1.0e-07 61.2 98 39.8
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 1.0e-07 61.2 104 44.2
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 1.0e-07 61.2 75 45.3
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.3e-07 60.8 38 68.4
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 1.3e-07 60.8 37 67.6
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.8e-07 60.5 101 42.6
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 1.8e-07 60.5 44 63.6
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 1.8e-07 60.5 47 59.6
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 3.0e-07 59.7 78 46.2
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 3.0e-07 59.7 40 70.0
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 3.0e-07 59.7 61 55.7
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 3.9e-07 59.3 92 39.1
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 5.1e-07 58.9 98 38.8
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 5.1e-07 58.9 98 38.8
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 5.1e-07 58.9 98 38.8
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 5.1e-07 58.9 82 41.5
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 5.1e-07 58.9 46 60.9
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 6.7e-07 58.5 89 40.4
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 1.1e-06 57.8 90 38.9
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.5e-06 57.4 45 57.8
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 1.5e-06 57.4 82 39.0
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 4.3e-06 55.8 91 38.5
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 5.6e-06 55.5 44 61.4


User provided reference genes

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