Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0290 Ceratophyllum demersum HOM05D003186 ORTHO05D003452 8.7e-75 283.5 137 100.0
CDE02G0869 Ceratophyllum demersum HOM05D003186 ORTHO05D003452 4.7e-28 128.3 72 84.7
Nn6g33672 Nelumbo nucifera HOM05D003186 ORTHO05D003452 2.2e-14 82.8 109 47.7
Actinidia05791 Actinidia chinensis HOM05D003186 ORTHO05D003452 6.5e-14 81.3 90 48.9
Hma1.2p1_0021F.1_g014275 Hydrangea macrophylla HOM05D003186 ORTHO05D003452 8.5e-14 80.9 107 47.7
Hma1.2p1_0021F.1_g014290 Hydrangea macrophylla HOM05D003186 ORTHO05D003452 8.5e-14 80.9 107 47.7
MBI04_g03333_MAGBIO Magnolia biondii HOM05D003186 ORTHO05D003452 1.9e-13 79.7 90 46.7
CDE12G0434 Ceratophyllum demersum HOM05D003186 ORTHO05D003452 2.5e-13 79.3 85 49.4
Nn1g00622 Nelumbo nucifera HOM05D003186 ORTHO05D003452 2.5e-13 79.3 114 43.9
TAR375G0380 Trochodendron aralioides HOM05D003186 ORTHO05D003452 2.5e-13 79.3 106 47.2
Actinidia33295 Actinidia chinensis HOM05D003186 ORTHO05D003452 3.2e-13 79.0 90 47.8
Ciclev10021280m.g Citrus clementina HOM05D003186 ORTHO05D003452 4.2e-13 78.6 116 43.1
Actinidia30956 Actinidia chinensis HOM05D003186 ORTHO05D003452 1.2e-12 77.0 91 48.4
Gohir.A08G141000 Gossypium hirsutum HOM05D003186 ORTHO05D003452 2.7e-12 75.9 90 48.9
TAR374G0545 Trochodendron aralioides HOM05D003186 ORTHO05D003452 4.7e-12 75.1 105 45.7
Gohir.D08G065200 Gossypium hirsutum HOM05D003186 ORTHO05D003452 6.1e-12 74.7 98 46.9
Duzib138G0449 Durio zibethinus HOM05D003186 ORTHO05D003452 8.0e-12 74.3 101 43.6
Duzib268G0279 Durio zibethinus HOM05D003186 ORTHO05D003452 1.0e-11 73.9 98 46.9
Gorai.004G067500 Gossypium raimondii HOM05D003186 ORTHO05D003452 1.0e-11 73.9 98 45.9
Gohir.D08G162100 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.8e-11 73.2 90 47.8
Cfa011019 Carpinus fangiana HOM05D003186 ORTHO05D003452 2.3e-11 72.8 104 44.2
PSO339G5444 Papaver somniferum HOM05D003186 ORTHO05D003452 3.0e-11 72.4 129 38.8
Dinv44017 Davidia involucrata HOM05D003186 ORTHO05D003452 5.2e-11 71.6 100 46.0
Rhsim01G0144500 Rhododendron simsii HOM05D003186 ORTHO05D003452 5.2e-11 71.6 94 47.9
Rhsim07G0039500 Rhododendron simsii HOM05D003186 ORTHO05D003452 5.2e-11 71.6 126 38.1
Atru.chr5.38 Acer truncatum HOM05D003186 ORTHO05D003452 8.8e-11 70.9 102 41.2
Atru.chr5.68 Acer truncatum HOM05D003186 ORTHO05D003452 8.8e-11 70.9 102 41.2
Gohir.A08G055900 Gossypium hirsutum HOM05D003186 ORTHO05D003452 8.8e-11 70.9 98 44.9
Psat3g101600 Pisum sativum HOM05D003186 ORTHO05D003452 8.8e-11 70.9 101 38.6
MSTRG.20661 Avicennia marina HOM05D003186 ORTHO05D003452 1.2e-10 70.5 146 38.4
COL.COLO4_12347 Corchorus olitorius HOM05D003186 ORTHO05D003452 1.2e-10 70.5 99 44.4
Lj1g0019973 Lotus japonicus HOM05D003186 ORTHO05D003452 1.2e-10 70.5 119 39.5
SGA_v2.0_scaffold77G25250 Striga asiatica HOM05D003186 ORTHO05D003452 1.2e-10 70.5 112 41.1
CAN.G756.11 Capsicum annuum HOM05D003186 ORTHO05D003452 2.0e-10 69.7 119 39.5
SalBow5G4877 Salvia bowleyana HOM05D003186 ORTHO05D003452 2.0e-10 69.7 104 40.4
Lalb_Chr03g0040811 Lupinus albus HOM05D003186 ORTHO05D003452 2.6e-10 69.3 121 33.1
Phvul.008G051200 Phaseolus vulgaris HOM05D003186 ORTHO05D003452 3.4e-10 68.9 105 39.0
Thecc.01G403000 Theobroma cacao HOM05D003186 ORTHO05D003452 3.4e-10 68.9 101 43.6
Lj9P549T18 Lonicera japonica HOM05D003186 ORTHO05D003452 4.4e-10 68.6 118 41.5
MSTRG.28131 Avicennia marina HOM05D003186 ORTHO05D003452 5.7e-10 68.2 90 44.4
Haze_02907 Corylus avellana HOM05D003186 ORTHO05D003452 5.7e-10 68.2 106 41.5
SalBow4G0872 Salvia bowleyana HOM05D003186 ORTHO05D003452 5.7e-10 68.2 109 42.2
Glyma.18G245700 Glycine max HOM05D003186 ORTHO05D003452 7.5e-10 67.8 90 42.2
Gorai.004G168400 Gossypium raimondii HOM05D003186 ORTHO05D003452 7.5e-10 67.8 94 43.6
PSO648G0113 Papaver somniferum HOM05D003186 ORTHO05D003452 7.5e-10 67.8 127 38.6
Sed0022506 Sechium edule HOM05D003186 ORTHO05D003452 7.5e-10 67.8 107 43.9
ClCG06G000800 Citrullus lanatus HOM05D003186 ORTHO05D003452 9.8e-10 67.4 113 43.4
CsaV3_6G006600 Cucumis sativus L. HOM05D003186 ORTHO05D003452 9.8e-10 67.4 110 43.6
Solyc01g088530.2 Solanum lycopersicum HOM05D003186 ORTHO05D003452 1.3e-09 67.0 115 41.7
BolC4t22186H Brassica oleracea HOM05D003186 ORTHO05D003452 1.7e-09 66.6 90 43.3
MELO3C022461.2 Cucumis melo HOM05D003186 ORTHO05D003452 2.2e-09 66.2 112 43.8
TWI59G0953 Tripterygium wilfordii HOM05D003186 ORTHO05D003452 2.2e-09 66.2 115 40.0
VMungo1383G2278 Vigna mungo HOM05D003186 ORTHO05D003452 2.2e-09 66.2 154 35.1
Ca_08022_v3 Cicer arietinum L. HOM05D003186 ORTHO05D003452 2.8e-09 65.9 99 40.4
Migut.B01481 Erythranthe guttata HOM05D003186 ORTHO05D003452 3.7e-09 65.5 110 40.9
Glyma.09G247300 Glycine max HOM05D003186 ORTHO05D003452 3.7e-09 65.5 104 40.4
Prupe.2G114900 Prunus persica HOM05D003186 ORTHO05D003452 3.7e-09 65.5 109 39.4
Duzib133G0015 Durio zibethinus HOM05D003186 ORTHO05D003452 4.8e-09 65.1 103 40.8
Nitab4.5_0016340g0010 Nicotiana tabacum HOM05D003186 ORTHO05D003452 4.8e-09 65.1 119 39.5
HPP92_025455 Vanilla planifolia HOM05D003186 ORTHO05D003452 4.8e-09 65.1 109 39.4
A05p04750 Brassica napus HOM05D003186 ORTHO05D003452 6.3e-09 64.7 90 44.4
FAN10G1238 Fragaria x ananassa HOM05D003186 ORTHO05D003452 6.3e-09 64.7 114 37.7
BcaC02g12291 Brassica carinata HOM05D003186 ORTHO05D003452 8.3e-09 64.3 91 44.0
C04p05560 Brassica napus HOM05D003186 ORTHO05D003452 8.3e-09 64.3 91 44.0
Sopen01g035390 Solanum pennellii HOM05D003186 ORTHO05D003452 8.3e-09 64.3 119 39.5
PGSC0003DMG400001684 Solanum tuberosum HOM05D003186 ORTHO05D003452 8.3e-09 64.3 120 40.0
MSTRG.17102 Avicennia marina HOM05D003186 ORTHO05D003452 1.1e-08 63.9 99 43.4
CiPaw.13G021700 Carya illinoinensis HOM05D003186 ORTHO05D003452 1.1e-08 63.9 110 37.3
Dinv43584 Davidia involucrata HOM05D003186 ORTHO05D003452 1.1e-08 63.9 120 39.2
FAN10G4096 Fragaria x ananassa HOM05D003186 ORTHO05D003452 1.1e-08 63.9 114 36.8
MD07G1088100 Malus domestica HOM05D003186 ORTHO05D003452 1.4e-08 63.5 102 37.3
Aqoxy3G02543 Aquilegia oxysepala HOM05D000001 ORTHO05D004986 1.8e-08 63.2 91 41.8
BraA05t19451Z Brassica rapa HOM05D003186 ORTHO05D003452 1.8e-08 63.2 90 43.3
Peaxi162Scf00745g00012 Petunia axillaris HOM05D003186 ORTHO05D003452 1.8e-08 63.2 108 41.7
Manes.05G059100 Manihot esculenta HOM05D003186 ORTHO05D003452 2.4e-08 62.8 105 41.0
Nitab4.5_0004088g0100 Nicotiana tabacum HOM05D003186 ORTHO05D003452 2.4e-08 62.8 126 38.9
Nitab4.5_0006873g0020 Nicotiana tabacum HOM05D003186 ORTHO05D003452 2.4e-08 62.8 128 39.8
ECA236G2684 Erigeron canadensis HOM05D003186 ORTHO05D003452 3.1e-08 62.4 92 40.2
Gohir.A12G099500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 3.1e-08 62.4 93 40.9
Carub.0004s2715 Capsella rubella HOM05D003186 ORTHO05D003452 4.1e-08 62.0 89 42.7
CARHR139820 Cardamine hirsuta HOM05D003186 ORTHO05D003452 4.1e-08 62.0 101 35.6
unitig_0.g1329 Utricularia gibba HOM05D003186 ORTHO05D003452 4.1e-08 62.0 94 44.7
EL10Ac1g00705 Beta vulgaris HOM05D003186 ORTHO05D003452 5.4e-08 61.6 121 38.8
Glyma.07G120800 Glycine max HOM05D003186 ORTHO05D003452 5.4e-08 61.6 151 33.1
FvH4_7g08720 Fragaria vesca HOM05D003186 ORTHO05D003452 7.0e-08 61.2 118 34.7
FAN03G3421 Fragaria x ananassa HOM05D003186 ORTHO05D003452 7.0e-08 61.2 117 35.9
Gohir.D12G102500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 7.0e-08 61.2 93 41.9
QL04p025941 Quercus lobata HOM05D003186 ORTHO05D003452 7.0e-08 61.2 110 37.3
QL04p026933 Quercus lobata HOM05D003186 ORTHO05D003452 7.0e-08 61.2 110 37.3
THA.LOC104803082 Tarenaya hassleriana HOM05D003186 ORTHO05D003452 7.0e-08 61.2 98 39.8
Cc02_g25690 Coffea canephora HOM05D003186 ORTHO05D003452 1.2e-07 60.5 102 40.2
DCAR_025021 Daucus carota HOM05D003186 ORTHO05D003452 1.2e-07 60.5 97 37.1
FAN06G1121 Fragaria x ananassa HOM05D003186 ORTHO05D003452 1.2e-07 60.5 130 33.8
Gorai.008G111700 Gossypium raimondii HOM05D003186 ORTHO05D003452 1.2e-07 60.5 93 41.9
Zm00001eb187670 Zea mays HOM05D003186 ORTHO05D003452 1.2e-07 60.5 86 38.4
Oeu024385.1 Olea europaea HOM05D003186 ORTHO05D003452 1.6e-07 60.1 129 38.0
THA.LOC104817174 Tarenaya hassleriana HOM05D003186 ORTHO05D003452 1.6e-07 60.1 120 36.7
Thhalv10001551m.g Eutrema salsugineum HOM05D003186 ORTHO05D003452 2.0e-07 59.7 92 38.0
TPR.G27403 Trifolium pratense HOM05D003186 ORTHO05D003452 2.0e-07 59.7 101 38.6
Sed0018587 Sechium edule HOM05D003186 ORTHO05D003452 2.7e-07 59.3 101 42.6
Aa31LG10G14340 Aethionema arabicum HOM05D003186 ORTHO05D003452 3.5e-07 58.9 91 38.5
arahy.Tifrunner.gnm1.ann1.U9U8W4 Arachis hypogaea HOM05D003186 ORTHO05D003452 4.5e-07 58.5 105 35.2
A09p52480 Brassica napus HOM05D003186 ORTHO05D003452 4.5e-07 58.5 90 41.1
Aa31LG1G26150 Aethionema arabicum HOM05D003186 ORTHO05D003452 5.9e-07 58.2 104 34.6
AT2G44600 Arabidopsis thaliana HOM05D003186 ORTHO05D003452 5.9e-07 58.2 94 38.3
Os04g0588000 Oryza sativa ssp. japonica HOM05D003186 ORTHO05D003452 5.9e-07 58.2 86 39.5
MELO3C006262.2 Cucumis melo HOM05D003186 ORTHO05D003452 7.7e-07 57.8 98 38.8
Glyma.03G103001 Glycine max HOM05D003186 ORTHO05D003452 7.7e-07 57.8 126 34.9
Ah.05g177570 Amaranthus hybridus HOM05D003186 ORTHO05D003452 1.0e-06 57.4 107 36.4
CANSAT25G0028 Cannabis sativa HOM05D003186 ORTHO05D003452 1.0e-06 57.4 146 33.6
CsaV3_3G010380 Cucumis sativus L. HOM05D003186 ORTHO05D003452 1.0e-06 57.4 98 38.8
FAN01G1315 Fragaria x ananassa HOM05D003186 ORTHO05D003452 1.0e-06 57.4 116 34.5
Zm00001eb072580 Zea mays HOM05D003186 ORTHO05D003452 1.0e-06 57.4 87 36.8
BcaB02g08836 Brassica carinata HOM05D003186 ORTHO05D003452 1.3e-06 57.0 92 40.2
Gohir.D11G078500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.3e-06 57.0 108 38.9
Gorai.007G084000 Gossypium raimondii HOM05D003186 ORTHO05D003452 1.3e-06 57.0 108 38.9
Oeu034770.1 Olea europaea HOM05D003186 ORTHO05D003452 1.7e-06 56.6 103 39.8
AL5G42410 Arabidopsis lyrata HOM05D003186 ORTHO05D003452 3.8e-06 55.5 105 37.1
BcaC07g40517 Brassica carinata HOM05D003186 ORTHO05D003452 3.8e-06 55.5 90 40.0
BcaC07g40522 Brassica carinata HOM05D003186 ORTHO05D003452 3.8e-06 55.5 90 40.0
C08p35230 Brassica napus HOM05D003186 ORTHO05D003452 3.8e-06 55.5 90 40.0
BolC8t51117H Brassica oleracea HOM05D003186 ORTHO05D003452 3.8e-06 55.5 90 40.0
BraA09t40678Z Brassica rapa HOM05D003186 ORTHO05D003452 3.8e-06 55.5 92 41.3
CiPaw.14G016300 Carya illinoinensis HOM05D003186 ORTHO05D003452 3.8e-06 55.5 132 33.3
Thhalv10006502m.g Eutrema salsugineum HOM05D003186 ORTHO05D003452 3.8e-06 55.5 93 39.8
Nitab4.5_0000204g0050 Nicotiana tabacum HOM05D003186 ORTHO05D003452 8.6e-06 54.3 107 40.2


User provided reference genes

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