Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 2.1e-129 465.7 232 100.0
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 2.7e-100 369.0 232 82.3
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 8.9e-64 247.7 170 74.7
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.5e-58 230.3 165 70.3
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 1.2e-57 227.3 167 70.1
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.2e-54 216.5 155 70.3
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.1e-52 209.9 165 69.1
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 2.7e-52 209.5 163 67.5
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 2.7e-52 209.5 166 66.3
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 4.6e-52 208.8 163 66.9
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 4.6e-52 208.8 165 67.9
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 6.0e-52 208.4 167 65.9
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 6.0e-52 208.4 165 67.9
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 7.8e-52 208.0 169 68.0
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 7.8e-52 208.0 166 66.3
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 1.0e-51 207.6 164 68.9
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 1.3e-51 207.2 167 67.1
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.7e-51 206.8 169 63.9
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 2.3e-51 206.5 163 66.9
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 3.0e-51 206.1 163 67.5
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 3.9e-51 205.7 165 66.1
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 6.6e-51 204.9 164 67.1
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 6.6e-51 204.9 167 65.9
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 6.6e-51 204.9 167 66.5
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 8.7e-51 204.5 164 67.1
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 8.7e-51 204.5 168 62.5
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 1.5e-50 203.8 161 67.1
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 1.9e-50 203.4 163 67.5
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 1.9e-50 203.4 161 67.7
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 1.9e-50 203.4 161 67.1
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 2.5e-50 203.0 166 65.7
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 2.5e-50 203.0 166 65.7
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 2.5e-50 203.0 165 67.3
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 2.5e-50 203.0 165 67.3
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 2.5e-50 203.0 161 68.3
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 3.3e-50 202.6 168 66.7
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 3.3e-50 202.6 163 68.1
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 5.6e-50 201.8 164 64.6
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 5.6e-50 201.8 163 66.3
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 5.6e-50 201.8 165 67.3
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 5.6e-50 201.8 165 67.3
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 5.6e-50 201.8 141 75.9
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 7.3e-50 201.4 163 66.9
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 7.3e-50 201.4 163 66.9
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 1.3e-49 200.7 164 64.6
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 1.3e-49 200.7 165 66.7
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.6e-49 200.3 162 66.7
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 2.1e-49 199.9 162 66.7
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 4.8e-49 198.7 165 66.7
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 4.8e-49 198.7 165 66.7
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 4.8e-49 198.7 163 66.9
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 4.8e-49 198.7 164 65.2
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 6.2e-49 198.4 165 66.7
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 8.1e-49 198.0 165 66.1
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 8.1e-49 198.0 162 66.0
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 1.1e-48 197.6 164 65.9
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 1.1e-48 197.6 164 65.9
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 1.1e-48 197.6 162 66.0
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.1e-48 197.6 162 66.0
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 1.4e-48 197.2 163 63.8
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 1.8e-48 196.8 168 62.5
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 2.4e-48 196.4 140 73.6
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 2.4e-48 196.4 164 65.2
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 4.0e-48 195.7 171 65.5
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 4.0e-48 195.7 168 64.3
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 4.0e-48 195.7 163 65.6
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 5.3e-48 195.3 166 65.1
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 5.3e-48 195.3 165 65.5
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 5.3e-48 195.3 139 75.5
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 5.3e-48 195.3 166 63.9
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 6.9e-48 194.9 164 65.9
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 6.9e-48 194.9 164 65.9
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 6.9e-48 194.9 164 65.9
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 9.0e-48 194.5 164 66.5
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 9.0e-48 194.5 142 72.5
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 1.2e-47 194.1 164 63.4
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.5e-47 193.7 102 89.2
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 2.0e-47 193.4 168 62.5
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 2.0e-47 193.4 154 69.5
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 2.6e-47 193.0 102 89.2
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 2.6e-47 193.0 164 67.7
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 3.4e-47 192.6 168 63.7
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 4.5e-47 192.2 168 66.1
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 7.6e-47 191.4 163 63.2
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 9.9e-47 191.0 164 64.6
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 9.9e-47 191.0 164 64.6
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 1.3e-46 190.7 167 62.3
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 1.3e-46 190.7 166 62.0
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 1.7e-46 190.3 153 68.0
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.7e-46 190.3 172 62.2
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.7e-46 190.3 166 62.7
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 8.4e-46 188.0 164 65.2
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 8.4e-46 188.0 168 63.1
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 8.4e-46 188.0 160 64.4
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.4e-45 187.2 154 66.9
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 4.2e-45 185.7 160 65.0
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 4.2e-45 185.7 164 63.4
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 5.4e-45 185.3 171 61.4
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 7.1e-45 184.9 168 63.1
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 1.2e-44 184.1 166 61.4
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 2.7e-44 183.0 136 69.1
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 3.5e-44 182.6 103 85.4
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 4.6e-44 182.2 103 84.5
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 4.6e-44 182.2 103 84.5
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 7.9e-44 181.4 168 62.5
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 1.0e-43 181.0 122 72.1
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 1.1e-42 177.6 143 66.4
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.1e-42 177.6 157 61.8
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 1.9e-42 176.8 102 82.4
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 5.6e-42 175.3 164 59.1
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 2.8e-41 172.9 101 81.2
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 4.8e-41 172.2 119 71.4
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 1.4e-40 170.6 101 81.2
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.3e-35 153.3 138 55.1
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 2.5e-34 149.8 163 54.0
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.5e-34 149.8 135 54.8
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 9.6e-34 147.9 163 54.0
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 9.6e-34 147.9 97 68.0
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 1.1e-32 144.4 126 56.3
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 2.4e-32 143.3 112 63.4
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 5.3e-32 142.1 111 62.2
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 6.9e-32 141.7 161 50.3
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 6.9e-24 115.2 72 72.2
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 3.2e-21 106.3 90 58.9
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.9e-18 97.1 131 46.6
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 4.8e-17 92.4 86 53.5
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 1.1e-16 91.3 55 81.8
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 5.3e-16 89.0 53 83.0
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 5.3e-16 89.0 53 83.0
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 1.2e-12 77.8 102 42.2


User provided reference genes

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