Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0164 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 3.9e-34 147.5 72 100.0
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 7.6e-30 133.3 69 92.8
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 1.4e-23 112.5 69 78.3
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 2.2e-08 62.0 71 45.1
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.8e-08 61.6 72 48.6
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 2.8e-08 61.6 74 47.3
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 8.2e-08 60.1 69 44.9
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.8e-07 58.9 73 43.8
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.8e-07 58.9 73 43.8
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 1.8e-07 58.9 73 43.8
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 2.4e-07 58.5 77 44.2
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 3.1e-07 58.2 71 45.1
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 4.1e-07 57.8 70 42.9
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 5.3e-07 57.4 75 44.0
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 5.3e-07 57.4 71 42.3
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 5.3e-07 57.4 71 46.5
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 6.9e-07 57.0 69 42.0
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 6.9e-07 57.0 69 42.0
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 6.9e-07 57.0 70 41.4
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 1.2e-06 56.2 69 43.5
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 1.2e-06 56.2 69 42.0
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 1.5e-06 55.8 69 43.5
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 1.5e-06 55.8 69 42.0
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 2.0e-06 55.5 72 45.8
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 2.0e-06 55.5 72 45.8
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 2.6e-06 55.1 69 42.0
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 2.6e-06 55.1 74 39.2
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 2.6e-06 55.1 81 40.7
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 3.4e-06 54.7 84 40.5
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 3.4e-06 54.7 69 42.0
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 4.5e-06 54.3 78 43.6
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 5.9e-06 53.9 75 42.7
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 5.9e-06 53.9 69 47.8
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 5.9e-06 53.9 78 43.6
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 5.9e-06 53.9 69 46.4
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 5.9e-06 53.9 71 43.7
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 7.7e-06 53.5 72 38.9
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 7.7e-06 53.5 69 39.1
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 7.7e-06 53.5 69 39.1


User provided reference genes

Program Settings