Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0151 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 0.0e+00 1710.7 860 100.0
CDE05G1788 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 0.0e+00 1562.0 951 85.2
TAR626G1694 Trochodendron aralioides HOM05D005576 ORTHO05D007010 0.0e+00 1162.5 992 60.7
Nn8g38631 Nelumbo nucifera HOM05D005576 ORTHO05D007010 0.0e+00 1137.1 992 58.6
Nn6g35707 Nelumbo nucifera HOM05D005576 ORTHO05D007010 0.0e+00 1116.3 992 58.7
Aqoxy7G04073 Aquilegia oxysepala HOM05D005576 ORTHO05D007010 0.0e+00 1110.9 993 57.7
MBI13_g12059_MAGBIO Magnolia biondii HOM05D005576 ORTHO05D007010 0.0e+00 1107.4 992 57.5
Dinv20428 Davidia involucrata HOM05D005576 ORTHO05D007010 0.0e+00 1092.8 970 57.8
Actinidia26024 Actinidia chinensis HOM05D005576 ORTHO05D007010 0.0e+00 1088.2 992 55.8
Sopen03g041140 Solanum pennellii HOM05D005576 ORTHO05D007010 0.0e+00 1077.4 993 55.6
Manes.11G019400 Manihot esculenta HOM05D005576 ORTHO05D007010 5.9e-312 1074.7 993 54.9
PGSC0003DMG400022883 Solanum tuberosum HOM05D005576 ORTHO05D007010 4.1e-311 1071.2 993 55.2
CAN.G668.41 Capsicum annuum HOM05D005576 ORTHO05D007010 7.1e-311 1070.5 992 55.2
Haze_16039 Corylus avellana HOM05D005576 ORTHO05D007010 1.5e-310 1069.3 992 55.6
CiPaw.01G218000 Carya illinoinensis HOM05D005576 ORTHO05D007010 6.4e-309 1063.9 992 55.4
Nitab4.5_0004422g0040 Nicotiana tabacum HOM05D005576 ORTHO05D007010 2.1e-307 1058.9 981 55.4
Nitab4.5_0002898g0010 Nicotiana tabacum HOM05D005576 ORTHO05D007010 3.5e-307 1058.1 981 54.9
Atru.chr1.3999 Acer truncatum HOM05D005576 ORTHO05D007010 6.0e-307 1057.4 992 54.8
TWI31G0259 Tripterygium wilfordii HOM05D005576 ORTHO05D007010 7.9e-307 1057.0 992 55.0
Lsat_1_v5_gn_4_93500 Lactuca sativa HOM05D005576 ORTHO05D007010 1.0e-306 1056.6 989 54.9
HanXRQChr09g0276901 Helianthus annuus HOM05D005576 ORTHO05D007010 1.3e-306 1056.2 993 55.4
Prupe.3G039600 Prunus persica HOM05D005576 ORTHO05D007010 1.3e-306 1056.2 992 55.0
Dinv37863 Davidia involucrata HOM05D005576 ORTHO05D007010 1.9e-305 1052.4 1017 54.1
Aa31LG4G2910 Aethionema arabicum HOM05D005576 ORTHO05D007010 4.3e-305 1051.2 993 55.5
Cc04_g01260 Coffea canephora HOM05D005576 ORTHO05D007010 4.3e-305 1051.2 993 55.1
vmacro22036 Vaccinium macrocarpon HOM05D005576 ORTHO05D007010 4.8e-304 1047.7 994 54.8
ECA232G2029 Erigeron canadensis HOM05D005576 ORTHO05D007010 6.2e-304 1047.3 992 55.0
GSVIVG01016742001 Vitis vinifera HOM05D005576 ORTHO05D007010 6.2e-304 1047.3 995 54.4
Thhalv10018070m.g Eutrema salsugineum HOM05D005576 ORTHO05D007010 1.1e-303 1046.6 992 54.3
Peaxi162Scf00038g02138 Petunia axillaris HOM05D005576 ORTHO05D007010 1.8e-303 1045.8 1076 51.3
COL.COLO4_30746 Corchorus olitorius HOM05D005576 ORTHO05D007010 1.3e-301 1039.6 992 54.9
Sc15g0000400 Simmondsia chinensis HOM05D005576 ORTHO05D007010 1.7e-301 1039.3 994 54.8
THA.LOC104808055 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 1.7e-301 1039.3 992 54.3
CiPaw.02G135100 Carya illinoinensis HOM05D005576 ORTHO05D007010 8.4e-301 1036.9 992 54.6
PGR102G0536 Punica granatum HOM05D005576 ORTHO05D007010 8.4e-301 1036.9 998 55.8
CSS0000574 Camellia sinensis var. sinensis HOM05D005576 ORTHO05D007010 4.2e-300 1034.6 996 54.5
QL05p004145 Quercus lobata HOM05D005576 ORTHO05D007010 5.5e-300 1034.2 992 54.3
TPR.G28874 Trifolium pratense HOM05D005576 ORTHO05D007010 5.5e-300 1034.2 993 54.4
PSO421G0066 Papaver somniferum HOM05D005576 ORTHO05D007010 7.1e-300 1033.9 1004 54.3
Rhsim12G0210100 Rhododendron simsii HOM05D005576 ORTHO05D007010 1.2e-299 1033.1 970 55.4
RcHm_v2.0_Chr2g0145781 Rosa chinensis HOM05D005576 ORTHO05D007010 1.2e-299 1033.1 992 53.8
Glyma.03G264400 Glycine max HOM05D005576 ORTHO05D007010 1.6e-299 1032.7 961 55.7
Migut.I01082 Erythranthe guttata HOM05D005576 ORTHO05D007010 4.6e-299 1031.2 994 54.0
FAN09G4405 Fragaria x ananassa HOM05D005576 ORTHO05D007010 4.6e-299 1031.2 992 54.0
MD09G1181500 Malus domestica HOM05D005576 ORTHO05D007010 7.9e-299 1030.4 992 54.2
MD17G1167700 Malus domestica HOM05D005576 ORTHO05D007010 2.3e-298 1028.9 992 53.9
VMungo1309G3067 Vigna mungo HOM05D005576 ORTHO05D007010 2.3e-298 1028.9 993 54.2
Glyma.19G263400 Glycine max HOM05D005576 ORTHO05D007010 3.9e-298 1028.1 992 54.4
Ca_09568_v3 Cicer arietinum L. HOM05D005576 ORTHO05D007010 6.7e-298 1027.3 993 53.6
FvH4_6g34890 Fragaria vesca HOM05D005576 ORTHO05D007010 6.7e-298 1027.3 992 53.7
AT1G72560 Arabidopsis thaliana HOM05D005576 ORTHO05D007010 8.7e-298 1026.9 992 53.6
Lalb_Chr04g0261101 Lupinus albus HOM05D005576 ORTHO05D007010 1.5e-297 1026.2 993 53.8
Psat3g000040 Pisum sativum HOM05D005576 ORTHO05D007010 2.5e-297 1025.4 993 53.6
Thecc.06G121300 Theobroma cacao HOM05D005576 ORTHO05D007010 2.5e-297 1025.4 992 54.4
Ciclev10024809m.g Citrus clementina HOM05D005576 ORTHO05D007010 3.7e-296 1021.5 971 55.1
CARHR065500 Cardamine hirsuta HOM05D005576 ORTHO05D007010 1.4e-295 1019.6 992 53.3
DCAR_026415 Daucus carota HOM05D005576 ORTHO05D007010 5.3e-295 1017.7 962 54.6
Duzib235G0347 Durio zibethinus HOM05D005576 ORTHO05D007010 1.2e-294 1016.5 992 53.3
Lalb_Chr15g0076791 Lupinus albus HOM05D005576 ORTHO05D007010 1.5e-294 1016.1 993 53.2
Gorai.011G059500 Gossypium raimondii HOM05D005576 ORTHO05D007010 3.4e-294 1015.0 992 53.8
Gohir.A10G053800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 3.8e-293 1011.5 992 53.7
Lj5C36G17 Lonicera japonica HOM05D005576 ORTHO05D007010 3.8e-293 1011.5 987 52.7
Carub.0002s1942 Capsella rubella HOM05D005576 ORTHO05D007010 4.9e-293 1011.1 992 52.1
Lj1g0011724 Lotus japonicus HOM05D005576 ORTHO05D007010 4.9e-293 1011.1 992 53.1
Oeu000412.2 Olea europaea HOM05D005576 ORTHO05D007010 1.4e-292 1009.6 994 52.6
Potri.001G168100 Populus trichocarpa HOM05D005576 ORTHO05D007010 1.9e-292 1009.2 995 52.4
Ah.08g216850 Amaranthus hybridus HOM05D005576 ORTHO05D007010 2.5e-292 1008.8 994 53.5
CsaV3_7G034420 Cucumis sativus L. HOM05D005576 ORTHO05D007010 7.1e-292 1007.3 993 52.8
Potri.003G066200 Populus trichocarpa HOM05D005576 ORTHO05D007010 1.6e-291 1006.1 997 51.8
THA.LOC104812251 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 1.6e-291 1006.1 992 53.2
CANSAT56G3183 Cannabis sativa HOM05D005576 ORTHO05D007010 3.5e-291 1005.0 993 52.9
ClCG09G001010 Citrullus lanatus HOM05D005576 ORTHO05D007010 4.6e-291 1004.6 1006 52.6
PSO063G0826 Papaver somniferum HOM05D005576 ORTHO05D007010 2.3e-290 1002.3 998 53.6
MELO3C024350.2 Cucumis melo HOM05D005576 ORTHO05D007010 5.1e-290 1001.1 993 52.5
Medtr7g117565 Medicago truncatula HOM05D005576 ORTHO05D007010 3.3e-289 998.4 997 52.9
Sp5g27640 Schrenkiella parvula HOM05D005576 ORTHO05D007010 9.6e-289 996.9 992 52.6
Sed0003060 Sechium edule HOM05D005576 ORTHO05D007010 9.6e-289 996.9 993 52.7
EL10Ac7g16417 Beta vulgaris HOM05D005576 ORTHO05D007010 2.8e-288 995.3 995 52.8
ATR0598G079 Amborella trichopoda HOM05D005576 ORTHO05D007010 4.8e-288 994.6 970 53.1
AL2G32250 Arabidopsis lyrata HOM05D005576 ORTHO05D007010 1.4e-287 993.0 991 52.2
Oeu015487.1 Olea europaea HOM05D005576 ORTHO05D007010 1.5e-286 989.6 973 54.1
SGA_v2.0_scaffold71G23839 Striga asiatica HOM05D005576 ORTHO05D007010 1.5e-286 989.6 994 52.3
MSTRG.4792 Avicennia marina HOM05D005576 ORTHO05D007010 4.6e-283 978.0 995 51.9
Sabra03G0038700 Salix brachista HOM05D005576 ORTHO05D007010 4.6e-283 978.0 973 51.7
Gohir.D10G055800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 6.1e-283 977.6 964 53.2
Actinidia25327 Actinidia chinensis HOM05D005576 ORTHO05D007010 6.3e-280 967.6 899 54.8
arahy.Tifrunner.gnm1.ann1.E27NE4 Arachis hypogaea HOM05D005576 ORTHO05D007010 1.3e-277 959.9 995 50.8
BolC6t39733H Brassica oleracea HOM05D005576 ORTHO05D007010 8.5e-277 957.2 995 50.8
C06p46920 Brassica napus HOM05D005576 ORTHO05D007010 1.4e-276 956.4 995 50.8
SalBow6G0288 Salvia bowleyana HOM05D005576 ORTHO05D007010 1.4e-276 956.4 980 51.1
SalBow6G5091 Salvia bowleyana HOM05D005576 ORTHO05D007010 1.4e-276 956.4 980 51.1
BraA07t31429Z Brassica rapa HOM05D005576 ORTHO05D007010 3.6e-275 951.8 995 50.8
A07p38760 Brassica napus HOM05D005576 ORTHO05D007010 7.9e-275 950.7 994 50.7
arahy.Tifrunner.gnm1.ann1.W8MD5J Arachis hypogaea HOM05D005576 ORTHO05D007010 2.3e-274 949.1 1025 49.3
Hund18687 Selenicereus undatus HOM05D005576 ORTHO05D007010 2.4e-271 939.1 921 53.3
MSTRG.10949 Avicennia marina HOM05D005576 ORTHO05D007010 5.0e-269 931.4 993 49.8
FAN02G3375 Fragaria x ananassa HOM05D005576 ORTHO05D007010 2.1e-267 926.0 934 52.6
AUR62001476 Chenopodium quinoa HOM05D005576 ORTHO05D007010 1.8e-266 922.9 960 51.1
FAN14G0396 Fragaria x ananassa HOM05D005576 ORTHO05D007010 1.1e-265 920.2 936 51.6
Duzib160G0875 Durio zibethinus HOM05D005576 ORTHO05D007010 1.8e-263 912.9 995 49.8
Solyc03g122370.4 Solanum lycopersicum HOM05D005576 ORTHO05D007010 2.5e-260 902.5 992 49.3
Oeu015486.1 Olea europaea HOM05D005576 ORTHO05D007010 3.6e-235 818.9 864 51.5
Lj9A532T67 Lonicera japonica HOM05D005576 ORTHO05D007010 2.9e-232 809.3 914 48.4
AUR62009889 Chenopodium quinoa HOM05D005576 ORTHO05D007010 1.0e-229 800.8 995 45.4
Zm00001eb327340 Zea mays HOM05D005576 ORTHO05D007010 1.1e-220 770.8 999 42.9
Mapoly0019s0146 Marchantia polymorpha HOM05D005576 ORTHO05D007010 9.5e-220 767.7 999 41.3
Zm00001eb109040 Zea mays HOM05D005576 ORTHO05D007010 1.6e-219 766.9 999 42.6
Pp3c12_21910 Physcomitrium patens HOM05D005576 ORTHO05D007010 3.1e-218 762.7 996 41.0
Os07g0613300 Oryza sativa ssp. japonica HOM05D005576 ORTHO05D007010 1.2e-214 750.7 1000 42.6
FAN05G3283 Fragaria x ananassa HOM05D005576 ORTHO05D007010 3.3e-204 716.1 609 58.0
Phvul.009G263000 Phaseolus vulgaris HOM05D005576 ORTHO05D007010 2.0e-193 680.2 726 51.2
Eucgr.F04406 Eucalyptus grandis HOM05D005576 ORTHO05D007010 2.2e-192 676.8 913 42.8
unitig_899.g14764 Utricularia gibba HOM05D005576 ORTHO05D007010 1.5e-188 664.1 785 47.1
SMO141G0108 Selaginella moellendorffii HOM05D005576 ORTHO05D007010 3.7e-187 659.4 984 37.4
SEGI_13199 Sequoiadendron giganteum HOM05D005576 ORTHO05D007010 6.2e-187 658.7 643 51.5
HPP92_026306 Vanilla planifolia HOM05D005576 ORTHO05D007010 1.6e-182 644.0 742 49.1
CBR_g44922 Chara braunii HOM05D005576 ORTHO05D007010 5.0e-160 569.3 1082 32.7
Actinidia27733 Actinidia chinensis HOM05D005576 ORTHO05D007010 2.5e-159 567.0 613 50.2
Actinidia26822 Actinidia chinensis HOM05D005576 ORTHO05D007010 2.1e-158 563.9 619 49.8
Cpa.g.sc589.4 Carica papaya HOM05D005576 ORTHO05D007010 9.7e-156 555.1 422 62.1
AagrBONN_evm.TU.Sc2ySwM_344.1866 Anthoceros agrestis HOM05D005576 ORTHO05D007010 2.7e-150 537.0 909 34.9
Dinv20426 Davidia involucrata HOM05D005576 ORTHO05D007010 4.4e-92 343.6 224 72.3
Actinidia26823 Actinidia chinensis HOM05D005576 ORTHO05D007010 7.3e-87 326.2 264 58.3
Actinidia27734 Actinidia chinensis HOM05D005576 ORTHO05D007010 7.3e-87 326.2 264 58.3
Cpa.g.sc1732.1 Carica papaya HOM05D005576 ORTHO05D007010 6.2e-78 296.6 194 70.6
Cre12.g496200 Chlamydomonas reinhardtii HOM05D005576 ORTHO05D007010 8.1e-78 296.2 781 28.7
Aa31LG4G2950 Aethionema arabicum HOM05D005576 ORTHO05D007010 1.2e-65 255.8 358 43.0
HPP92_026305 Vanilla planifolia HOM05D005576 ORTHO05D007010 1.8e-56 225.3 240 48.8
MCO02G354 Micromonas commoda HOM05D005576 ORTHO05D007010 1.6e-41 175.6 738 25.2
unitig_899.g14765 Utricularia gibba HOM05D005576 ORTHO05D007010 1.1e-29 136.3 109 56.9
C02p30110 Brassica napus HOM05D005576 ORTHO05D007010 5.3e-21 107.5 142 43.7
BolC2t09060H Brassica oleracea HOM05D005576 ORTHO05D007010 9.4e-18 96.7 141 41.1
PRCOL_00005439 Prasinoderma coloniale HOM05D005576 ORTHO05D007010 2.7e-12 78.6 603 20.9
BcaB05g24763 Brassica carinata HOM05D000046 ORTHO05D000457 2.3e-11 75.5 65 52.3
Cfa022457 Carpinus fangiana HOM05D002636 ORTHO05D003490 1.5e-07 62.8 315 22.9
Sabra01G0142500 Salix brachista HOM05D005576 ORTHO05D007010 3.7e-06 58.2 49 57.1


User provided reference genes

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