Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0147 Ceratophyllum demersum HOM05D002130 ORTHO05D002157 1.9e-37 158.7 82 100.0
CDE05G1691 Ceratophyllum demersum HOM05D002130 ORTHO05D002157 3.1e-27 124.8 73 86.3
CDE11G1246 Ceratophyllum demersum HOM05D002130 ORTHO05D002157 6.4e-25 117.1 57 100.0
Aqoxy5G00513 Aquilegia oxysepala HOM05D002130 ORTHO05D002157 5.8e-10 67.4 76 50.0
Potri.005G034400 Populus trichocarpa HOM05D002130 ORTHO05D002157 5.8e-10 67.4 67 50.7
Manes.08G121700 Manihot esculenta HOM05D002130 ORTHO05D002157 1.0e-09 66.6 76 48.7
Thecc.05G304800 Theobroma cacao HOM05D002130 ORTHO05D002157 2.2e-09 65.5 64 50.0
TWI12G0807 Tripterygium wilfordii HOM05D002130 ORTHO05D002157 2.2e-09 65.5 73 49.3
A02p05340 Brassica napus HOM05D002130 ORTHO05D002157 2.9e-09 65.1 69 49.3
BraA02t05492Z Brassica rapa HOM05D002130 ORTHO05D002157 2.9e-09 65.1 69 49.3
AUR62038084 Chenopodium quinoa HOM05D002130 ORTHO05D002157 2.9e-09 65.1 52 57.7
AUR62038164 Chenopodium quinoa HOM05D002130 ORTHO05D002157 2.9e-09 65.1 52 57.7
AT5G19250 Arabidopsis thaliana HOM05D002130 ORTHO05D002157 3.8e-09 64.7 69 46.4
Nn4g26233 Nelumbo nucifera HOM05D002130 ORTHO05D002157 3.8e-09 64.7 71 46.5
arahy.Tifrunner.gnm1.ann1.657ZKM Arachis hypogaea HOM05D002130 ORTHO05D002157 5.0e-09 64.3 68 51.5
CiPaw.01G162300 Carya illinoinensis HOM05D002130 ORTHO05D002157 5.0e-09 64.3 74 48.6
A02p05390 Brassica napus HOM05D002130 ORTHO05D002157 8.4e-09 63.5 69 47.8
GSVIVG01017912001 Vitis vinifera HOM05D002130 ORTHO05D002157 8.4e-09 63.5 70 45.7
AUR62038162 Chenopodium quinoa HOM05D002130 ORTHO05D002157 1.1e-08 63.2 52 55.8
arahy.Tifrunner.gnm1.ann1.2HZ4P1 Arachis hypogaea HOM05D002130 ORTHO05D002157 1.4e-08 62.8 68 48.5
Manes.15G025500 Manihot esculenta HOM05D002130 ORTHO05D002157 1.4e-08 62.8 76 44.7
TAR636G1168 Trochodendron aralioides HOM05D002130 ORTHO05D002157 1.9e-08 62.4 72 45.8
AL6G30710 Arabidopsis lyrata HOM05D002130 ORTHO05D002157 2.5e-08 62.0 69 43.5
BcaB05g23380 Brassica carinata HOM05D002130 ORTHO05D002157 2.5e-08 62.0 69 47.8
BcaC03g13656 Brassica carinata HOM05D002130 ORTHO05D002157 2.5e-08 62.0 69 47.8
BNapus_Darmor_BZH_scaffold_38p02690 Brassica napus HOM05D002130 ORTHO05D002157 2.5e-08 62.0 69 47.8
BolC2t06947H Brassica oleracea HOM05D002130 ORTHO05D002157 2.5e-08 62.0 69 47.8
TWI09G0344 Tripterygium wilfordii HOM05D002130 ORTHO05D002157 2.5e-08 62.0 61 45.9
Atru.chr2.441 Acer truncatum HOM05D002130 ORTHO05D002157 3.2e-08 61.6 73 46.6
Hma1.2p1_0995F.1_g245730 Hydrangea macrophylla HOM05D002130 ORTHO05D002157 3.2e-08 61.6 75 45.3
Lalb_Chr09g0319691 Lupinus albus HOM05D002130 ORTHO05D002157 3.2e-08 61.6 74 50.0
Carub.0003s0546 Capsella rubella HOM05D002130 ORTHO05D002157 4.2e-08 61.2 71 47.9
Haze_00942 Corylus avellana HOM05D002130 ORTHO05D002157 4.2e-08 61.2 69 46.4
CsaV3_6G038340 Cucumis sativus L. HOM05D002130 ORTHO05D002157 4.2e-08 61.2 71 43.7
Phvul.007G053500 Phaseolus vulgaris HOM05D002130 ORTHO05D002157 4.2e-08 61.2 66 51.5
Potri.013G023801 Populus trichocarpa HOM05D002130 ORTHO05D002157 4.2e-08 61.2 50 58.0
Sc06g0003360 Simmondsia chinensis HOM05D002130 ORTHO05D002157 4.2e-08 61.2 62 48.4
MELO3C014498.2 Cucumis melo HOM05D002130 ORTHO05D002157 5.5e-08 60.8 68 45.6
Sp6g25160 Schrenkiella parvula HOM05D002130 ORTHO05D002157 5.5e-08 60.8 69 42.0
Sed0004357 Sechium edule HOM05D002130 ORTHO05D002157 5.5e-08 60.8 71 43.7
COL.COLO4_13483 Corchorus olitorius HOM05D002130 ORTHO05D002157 7.1e-08 60.5 70 50.0
Medtr1g105305 Medicago truncatula HOM05D002130 ORTHO05D002157 7.1e-08 60.5 48 54.2
Carub.0006s1758 Capsella rubella HOM05D002130 ORTHO05D002157 9.3e-08 60.1 69 43.5
Cpa.g.sc994.1 Carica papaya HOM05D002130 ORTHO05D002157 9.3e-08 60.1 76 44.7
CiPaw.08G165700 Carya illinoinensis HOM05D002130 ORTHO05D002157 9.3e-08 60.1 66 50.0
AL6G30680 Arabidopsis lyrata HOM05D002130 ORTHO05D002157 1.2e-07 59.7 71 47.9
CARHR080530 Cardamine hirsuta HOM05D002130 ORTHO05D002157 1.2e-07 59.7 71 43.7
CARHR193730 Cardamine hirsuta HOM05D002130 ORTHO05D002157 1.2e-07 59.7 74 45.9
CiPaw.02G094000 Carya illinoinensis HOM05D002130 ORTHO05D002157 1.2e-07 59.7 73 43.8
ClCG06G005930 Citrullus lanatus HOM05D002130 ORTHO05D002157 1.2e-07 59.7 53 47.2
Duzib128G0265 Durio zibethinus HOM05D002130 ORTHO05D002157 1.2e-07 59.7 68 48.5
Glyma.10G251000 Glycine max HOM05D002130 ORTHO05D002157 1.2e-07 59.7 67 46.3
Gohir.A02G029500 Gossypium hirsutum HOM05D002130 ORTHO05D002157 1.2e-07 59.7 70 44.3
Psat6g209320 Pisum sativum HOM05D002130 ORTHO05D002157 1.2e-07 59.7 70 47.1
Potri.008G195000 Populus trichocarpa HOM05D002130 ORTHO05D002157 1.2e-07 59.7 79 41.8
AT1G54860 Arabidopsis thaliana HOM05D002130 ORTHO05D002157 1.6e-07 59.3 74 41.9
BcaC06g31761 Brassica carinata HOM05D002130 ORTHO05D002157 1.6e-07 59.3 74 41.9
Carub.0002s0857 Capsella rubella HOM05D002130 ORTHO05D002157 1.6e-07 59.3 74 40.5
Dinv32943 Davidia involucrata HOM05D002130 ORTHO05D002157 1.6e-07 59.3 71 43.7
TWI73G0274 Tripterygium wilfordii HOM05D002130 ORTHO05D002157 1.6e-07 59.3 69 46.4
TAR365G0191 Trochodendron aralioides HOM05D002130 ORTHO05D002157 1.6e-07 59.3 74 45.9
EL10As3g23346 Beta vulgaris HOM05D002130 ORTHO05D002157 2.1e-07 58.9 48 54.2
Manes.08G121800 Manihot esculenta HOM05D002130 ORTHO05D002157 2.1e-07 58.9 76 47.4
Aqoxy2G03308 Aquilegia oxysepala HOM05D002130 ORTHO05D002157 2.7e-07 58.5 75 37.3
BcaB05g23381 Brassica carinata HOM05D002130 ORTHO05D002157 2.7e-07 58.5 70 48.6
Ca_10971_v3 Cicer arietinum L. HOM05D002130 ORTHO05D002157 2.7e-07 58.5 78 44.9
Duzib151G1141 Durio zibethinus HOM05D002130 ORTHO05D002157 2.7e-07 58.5 78 43.6
AL1G65320 Arabidopsis lyrata HOM05D002130 ORTHO05D002157 3.5e-07 58.2 74 40.5
AL3G16870 Arabidopsis lyrata HOM05D002130 ORTHO05D002157 3.5e-07 58.2 72 44.4
BcaC03g13654 Brassica carinata HOM05D002130 ORTHO05D002157 3.5e-07 58.2 75 40.0
BcaC03g13657 Brassica carinata HOM05D002130 ORTHO05D002157 3.5e-07 58.2 75 40.0
BolC2t06948H Brassica oleracea HOM05D002130 ORTHO05D002157 3.5e-07 58.2 75 40.0
Gohir.D02G037300 Gossypium hirsutum HOM05D002130 ORTHO05D002157 3.5e-07 58.2 78 41.0
Gorai.005G041200 Gossypium raimondii HOM05D002130 ORTHO05D002157 3.5e-07 58.2 78 41.0
HanXRQChr09g0250291 Helianthus annuus HOM05D002130 ORTHO05D002157 3.5e-07 58.2 70 42.9
Lj1g0004318 Lotus japonicus HOM05D002130 ORTHO05D002157 3.5e-07 58.2 71 43.7
PGR142G2917 Punica granatum HOM05D002130 ORTHO05D002157 3.5e-07 58.2 59 47.5
BcaC05g30065 Brassica carinata HOM05D002130 ORTHO05D002157 4.6e-07 57.8 68 48.5
Gohir.D09G054300 Gossypium hirsutum HOM05D002130 ORTHO05D002157 4.6e-07 57.8 78 43.6
Psat4g211040 Pisum sativum HOM05D002130 ORTHO05D002157 4.6e-07 57.8 67 44.8
Rhsim07G0182100 Rhododendron simsii HOM05D002130 ORTHO05D002157 4.6e-07 57.8 68 47.1
Ca_24380_v3 Cicer arietinum L. HOM05D002130 ORTHO05D002157 6.1e-07 57.4 53 45.3
Dinv23951 Davidia involucrata HOM05D002130 ORTHO05D002157 6.1e-07 57.4 65 46.2
Gohir.A09G055400 Gossypium hirsutum HOM05D002130 ORTHO05D002157 6.1e-07 57.4 78 43.6
Gorai.006G052800 Gossypium raimondii HOM05D002130 ORTHO05D002157 6.1e-07 57.4 78 43.6
HanXRQChr09g0259661 Helianthus annuus HOM05D002130 ORTHO05D002157 6.1e-07 57.4 63 42.9
Nitab4.5_0000630g0100 Nicotiana tabacum HOM05D002130 ORTHO05D002157 6.1e-07 57.4 71 45.1
GSVIVG01000039001 Vitis vinifera HOM05D002130 ORTHO05D002157 6.1e-07 57.4 71 46.5
BcaC03g13653 Brassica carinata HOM05D002130 ORTHO05D002157 7.9e-07 57.0 69 44.9
A03p68430 Brassica napus HOM05D002130 ORTHO05D002157 7.9e-07 57.0 74 40.5
CAN.G1077.19 Capsicum annuum HOM05D002130 ORTHO05D002157 7.9e-07 57.0 63 46.0
ClCG02G015890 Citrullus lanatus HOM05D002130 ORTHO05D002157 7.9e-07 57.0 69 39.1
MELO3C004276.2 Cucumis melo HOM05D002130 ORTHO05D002157 7.9e-07 57.0 62 40.3
AT5G19230 Arabidopsis thaliana HOM05D002130 ORTHO05D002157 1.0e-06 56.6 69 40.6
BcaC02g10741 Brassica carinata HOM05D002130 ORTHO05D002157 1.0e-06 56.6 74 39.2
BcaC09g47873 Brassica carinata HOM05D002130 ORTHO05D002157 1.0e-06 56.6 70 38.6
C04p25490 Brassica napus HOM05D002130 ORTHO05D002157 1.0e-06 56.6 74 39.2
BraA01t04454Z Brassica rapa HOM05D002130 ORTHO05D002157 1.0e-06 56.6 70 38.6
Lj9C27T3 Lonicera japonica HOM05D002130 ORTHO05D002157 1.0e-06 56.6 56 46.4
MD12G1220400 Malus domestica HOM05D002130 ORTHO05D002157 1.0e-06 56.6 66 45.5
PGR031G3063 Punica granatum HOM05D002130 ORTHO05D002157 1.0e-06 56.6 68 45.6
Sp3g04980 Schrenkiella parvula HOM05D002130 ORTHO05D002157 1.0e-06 56.6 69 44.9
Hund12172 Selenicereus undatus HOM05D002130 ORTHO05D002157 1.0e-06 56.6 48 56.2
TPR.G37889 Trifolium pratense HOM05D002130 ORTHO05D002157 1.0e-06 56.6 70 42.9
TWI53G1258 Tripterygium wilfordii HOM05D002130 ORTHO05D002157 1.0e-06 56.6 69 43.5
AT3G06035 Arabidopsis thaliana HOM05D002130 ORTHO05D002157 1.3e-06 56.2 65 46.2
arahy.Tifrunner.gnm1.ann1.AGRZ5A Arachis hypogaea HOM05D002130 ORTHO05D002157 1.3e-06 56.2 78 43.6
A02p05350 Brassica napus HOM05D002130 ORTHO05D002157 1.3e-06 56.2 71 40.8
A02p05400 Brassica napus HOM05D002130 ORTHO05D002157 1.3e-06 56.2 71 40.8
BraA02t05493Z Brassica rapa HOM05D002130 ORTHO05D002157 1.3e-06 56.2 71 40.8
Cpa.g.sc48.38 Carica papaya HOM05D002130 ORTHO05D002157 1.3e-06 56.2 74 40.5
MD12G1220500 Malus domestica HOM05D002130 ORTHO05D002157 1.3e-06 56.2 47 51.1
Nn1g02204 Nelumbo nucifera HOM05D002130 ORTHO05D002157 1.3e-06 56.2 74 45.9
Aa31LG2G11840 Aethionema arabicum HOM05D002130 ORTHO05D002157 1.8e-06 55.8 61 42.6
Cfa015603 Carpinus fangiana HOM05D002130 ORTHO05D002157 1.8e-06 55.8 69 42.0
ECA240G4823 Erigeron canadensis HOM05D002130 ORTHO05D000016 1.8e-06 55.8 50 48.0
Migut.N00160 Erythranthe guttata HOM05D002130 ORTHO05D002157 1.8e-06 55.8 70 40.0
Lalb_Chr06g0164821 Lupinus albus HOM05D002130 ORTHO05D002157 1.8e-06 55.8 68 42.6
Medtr5g005710 Medicago truncatula HOM05D002130 ORTHO05D002157 1.8e-06 55.8 53 43.4
Potri.010G033400 Populus trichocarpa HOM05D002130 ORTHO05D002157 1.8e-06 55.8 62 45.2
QL06p003670 Quercus lobata HOM05D002130 ORTHO05D002157 1.8e-06 55.8 72 41.7
VMungo0720G2803 Vigna mungo HOM05D002130 ORTHO05D002157 1.8e-06 55.8 69 43.5
Gohir.A13G107300 Gossypium hirsutum HOM05D002130 ORTHO05D002157 2.3e-06 55.5 56 48.2
Gohir.D13G110500 Gossypium hirsutum HOM05D002130 ORTHO05D002157 2.3e-06 55.5 56 48.2
Gorai.013G123800 Gossypium raimondii HOM05D002130 ORTHO05D002157 2.3e-06 55.5 56 48.2
QL03p006519 Quercus lobata HOM05D002130 ORTHO05D002157 2.3e-06 55.5 74 43.2
Thecc.04G225600 Theobroma cacao HOM05D002130 ORTHO05D002157 2.3e-06 55.5 80 40.0
Eucgr.B01107 Eucalyptus grandis HOM05D002130 ORTHO05D002157 3.0e-06 55.1 46 47.8
Thhalv10021555m.g Eutrema salsugineum HOM05D002130 ORTHO05D002157 3.0e-06 55.1 70 44.3
Lj5g0002149 Lotus japonicus HOM05D002130 ORTHO05D002157 3.0e-06 55.1 70 41.4
MD04G1206700 Malus domestica HOM05D002130 ORTHO05D002157 3.0e-06 55.1 72 41.7
Manes.08G121950 Manihot esculenta HOM05D002130 ORTHO05D002157 3.0e-06 55.1 80 43.8
PSO170G5605 Papaver somniferum HOM05D002130 ORTHO05D002157 3.0e-06 55.1 70 41.4
PSO302G0238 Papaver somniferum HOM05D002130 ORTHO05D002157 3.0e-06 55.1 70 41.4
PGR083G2719 Punica granatum HOM05D002130 ORTHO05D002157 3.0e-06 55.1 83 41.0
THA.LOC104805872 Tarenaya hassleriana HOM05D002130 ORTHO05D002157 3.0e-06 55.1 66 43.9
TWI09G1072 Tripterygium wilfordii HOM05D002130 ORTHO05D002157 3.0e-06 55.1 48 45.8
BcaB04g21320 Brassica carinata HOM05D002130 ORTHO05D002157 3.9e-06 54.7 63 42.9
Ca_24374_v3 Cicer arietinum L. HOM05D002130 ORTHO05D002157 3.9e-06 54.7 70 38.6
Eucgr.L00601 Eucalyptus grandis HOM05D002130 ORTHO05D002157 3.9e-06 54.7 46 50.0
Glyma.20G142700 Glycine max HOM05D002130 ORTHO05D002157 3.9e-06 54.7 67 41.8
Peaxi162Scf01336g00020 Petunia axillaris HOM05D002130 ORTHO05D002157 3.9e-06 54.7 67 41.8
A05p41970 Brassica napus HOM05D002130 ORTHO05D002157 5.1e-06 54.3 63 44.4
C05p61220 Brassica napus HOM05D002130 ORTHO05D002157 5.1e-06 54.3 63 44.4
Carub.0006s1757 Capsella rubella HOM05D002130 ORTHO05D002157 5.1e-06 54.3 66 47.0
AUR62000838 Chenopodium quinoa HOM05D002130 ORTHO05D002157 5.1e-06 54.3 69 42.0
Lj6A595T59 Lonicera japonica HOM05D002130 ORTHO05D002157 5.1e-06 54.3 70 38.6
MD16G1187000 Malus domestica HOM05D002130 ORTHO05D002157 5.1e-06 54.3 76 40.8
Nitab4.5_0005388g0040 Nicotiana tabacum HOM05D002130 ORTHO05D002157 5.1e-06 54.3 64 46.9
THA.LOC104802757 Tarenaya hassleriana HOM05D002130 ORTHO05D002157 5.1e-06 54.3 67 43.3
Actinidia23499 Actinidia chinensis HOM05D002130 ORTHO05D002157 6.7e-06 53.9 69 39.1
Aa31LG5G16520 Aethionema arabicum HOM05D002130 ORTHO05D002157 6.7e-06 53.9 65 46.2
arahy.Tifrunner.gnm1.ann1.275AW9 Arachis hypogaea HOM05D002130 ORTHO05D002157 6.7e-06 53.9 76 39.5
EL10Ac4g09342 Beta vulgaris HOM05D002130 ORTHO05D002157 6.7e-06 53.9 67 44.8
BolC4t24070H Brassica oleracea HOM05D002130 ORTHO05D002157 6.7e-06 53.9 74 41.9
CARHR056030 Cardamine hirsuta HOM05D002130 ORTHO05D002157 6.7e-06 53.9 74 39.2
FAN07G0935 Fragaria x ananassa HOM05D002130 ORTHO05D002157 6.7e-06 53.9 68 42.6
Nitab4.5_0008677g0030 Nicotiana tabacum HOM05D002130 ORTHO05D002157 6.7e-06 53.9 62 45.2
QL03p006535 Quercus lobata HOM05D002130 ORTHO05D002157 6.7e-06 53.9 67 47.8
Sabra08G0148200 Salix brachista HOM05D002130 ORTHO05D002157 6.7e-06 53.9 50 50.0
SalBow5G1342 Salvia bowleyana HOM05D002130 ORTHO05D002157 6.7e-06 53.9 64 40.6
SalBow5G5354 Salvia bowleyana HOM05D002130 ORTHO05D002157 6.7e-06 53.9 64 40.6
Atru.chr4.2528 Acer truncatum HOM05D002130 ORTHO05D002157 8.7e-06 53.5 72 40.3
AUR62005135 Chenopodium quinoa HOM05D002130 ORTHO05D002157 8.7e-06 53.5 57 43.9
Thhalv10023896m.g Eutrema salsugineum HOM05D002130 ORTHO05D002157 8.7e-06 53.5 76 40.8
FvH4_6g05670 Fragaria vesca HOM05D002130 ORTHO05D002157 8.7e-06 53.5 73 42.5
Medtr7g113640 Medicago truncatula HOM05D002130 ORTHO05D002157 8.7e-06 53.5 66 40.9
PGSC0003DMG400028587 Solanum tuberosum HOM05D002130 ORTHO05D002157 8.7e-06 53.5 51 49.0


User provided reference genes

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