Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 7.8e-45 183.3 88 100.0
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 1.0e-20 103.2 77 62.3
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 1.9e-19 99.0 53 81.1
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 1.9e-19 99.0 53 81.1
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.9e-19 99.0 53 81.1
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 1.9e-19 99.0 53 81.1
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 3.3e-19 98.2 53 81.1
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 4.3e-19 97.8 53 81.1
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 4.3e-19 97.8 53 81.1
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 4.3e-19 97.8 53 81.1
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 4.3e-19 97.8 53 81.1
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 4.3e-19 97.8 96 53.1
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 9.7e-19 96.7 53 81.1
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 9.7e-19 96.7 53 81.1
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 1.6e-18 95.9 53 79.2
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.2e-18 95.5 53 79.2
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 2.2e-18 95.5 53 79.2
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 2.2e-18 95.5 53 79.2
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 2.8e-18 95.1 53 79.2
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 2.8e-18 95.1 52 82.7
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 3.7e-18 94.7 53 77.4
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 4.8e-18 94.4 53 77.4
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 4.8e-18 94.4 53 79.2
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 6.3e-18 94.0 53 77.4
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 6.3e-18 94.0 53 77.4
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 8.2e-18 93.6 53 79.2
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 1.1e-17 93.2 53 79.2
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 1.1e-17 93.2 53 77.4
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 1.4e-17 92.8 53 75.5
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.4e-17 92.8 53 79.2
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.4e-17 92.8 53 79.2
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 1.4e-17 92.8 53 79.2
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 1.4e-17 92.8 53 77.4
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 1.8e-17 92.4 53 77.4
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.4e-17 92.0 52 76.9
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 3.1e-17 91.7 53 75.5
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 3.1e-17 91.7 53 75.5
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 3.1e-17 91.7 53 75.5
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 3.1e-17 91.7 53 75.5
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 5.3e-17 90.9 53 81.1
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 5.3e-17 90.9 53 75.5
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 5.3e-17 90.9 52 76.9
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 5.3e-17 90.9 53 77.4
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 5.3e-17 90.9 53 77.4
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 5.3e-17 90.9 53 77.4
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 5.3e-17 90.9 53 73.6
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 5.3e-17 90.9 53 77.4
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 6.9e-17 90.5 53 75.5
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 6.9e-17 90.5 53 75.5
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 6.9e-17 90.5 52 76.9
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 6.9e-17 90.5 52 75.0
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 6.9e-17 90.5 53 73.6
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 9.0e-17 90.1 52 76.9
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 9.0e-17 90.1 52 76.9
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 9.0e-17 90.1 52 75.0
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 1.2e-16 89.7 53 73.6
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.2e-16 89.7 52 76.9
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 1.2e-16 89.7 53 77.4
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 1.2e-16 89.7 52 75.0
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.2e-16 89.7 53 75.5
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.2e-16 89.7 53 75.5
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.5e-16 89.4 53 77.4
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 1.5e-16 89.4 52 75.0
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 1.5e-16 89.4 53 73.6
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 2.0e-16 89.0 53 73.6
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 2.6e-16 88.6 53 73.6
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 2.6e-16 88.6 54 79.6
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 3.4e-16 88.2 53 69.8
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 3.4e-16 88.2 53 75.5
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 3.4e-16 88.2 53 77.4
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 4.5e-16 87.8 52 73.1
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 4.5e-16 87.8 53 71.7
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 5.9e-16 87.4 53 75.5
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 7.7e-16 87.0 53 73.6
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 7.7e-16 87.0 53 71.7
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 7.7e-16 87.0 53 71.7
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.7e-15 85.9 53 71.7
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 1.7e-15 85.9 53 69.8
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.7e-15 85.9 56 76.8
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 1.7e-15 85.9 56 76.8
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 2.2e-15 85.5 48 81.2
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 2.2e-15 85.5 53 69.8
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 2.9e-15 85.1 46 80.4
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 2.9e-15 85.1 53 69.8
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 3.8e-15 84.7 53 69.8
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 3.8e-15 84.7 56 69.6
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.8e-15 84.7 46 82.6
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 8.5e-15 83.6 53 71.7
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 8.5e-15 83.6 53 71.7
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 8.5e-15 83.6 52 73.1
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 1.4e-14 82.8 52 75.0
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 1.4e-14 82.8 56 73.2
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 1.9e-14 82.4 54 68.5
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.5e-14 82.0 53 67.9
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 3.2e-14 81.6 51 74.5
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 4.2e-14 81.3 53 71.7
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 7.2e-14 80.5 50 76.0
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 1.6e-13 79.3 48 77.1
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 3.6e-13 78.2 51 74.5
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 6.1e-13 77.4 50 68.0
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 6.1e-13 77.4 50 68.0
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 6.1e-13 77.4 52 67.3
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 7.9e-13 77.0 49 79.6
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 7.9e-13 77.0 49 79.6
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 3.0e-12 75.1 58 60.3
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 3.0e-12 75.1 58 62.1
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.5e-11 72.0 55 60.0
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 4.3e-11 71.2 50 64.0
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 2.2e-10 68.9 55 58.2
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 5.3e-09 64.3 53 52.8
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 3.4e-08 61.6 49 67.3
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 4.5e-08 61.2 36 83.3


User provided reference genes

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