Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0046 Ceratophyllum demersum HOM05D000818 ORTHO05D001324 3.6e-106 388.3 198 100.0
CDE09G1039 Ceratophyllum demersum HOM05D000818 ORTHO05D001324 2.9e-15 86.3 46 89.1
Nn1g00855 Nelumbo nucifera HOM05D000818 ORTHO05D001324 4.4e-11 72.4 46 73.9
Nn6g33830 Nelumbo nucifera HOM05D000818 ORTHO05D001324 5.7e-11 72.0 46 73.9
Aqoxy7G00863 Aquilegia oxysepala HOM05D000818 ORTHO05D001324 9.8e-11 71.2 46 71.7
Peaxi162Scf00475g00517 Petunia axillaris HOM05D000818 ORTHO05D001324 9.8e-11 71.2 46 71.7
MSTRG.20692 Avicennia marina HOM05D000818 ORTHO05D001324 1.3e-10 70.9 56 66.1
Glyma.18G251900 Glycine max HOM05D000818 ORTHO05D001324 1.3e-10 70.9 46 71.7
Nitab4.5_0000920g0140 Nicotiana tabacum HOM05D000818 ORTHO05D001324 1.7e-10 70.5 46 71.7
Nitab4.5_0013736g0010 Nicotiana tabacum HOM05D000818 ORTHO05D001324 1.7e-10 70.5 46 71.7
MBI04_g46825_MAGBIO Magnolia biondii HOM05D000818 ORTHO05D001324 2.2e-10 70.1 46 71.7
Sed0002445 Sechium edule HOM05D000818 ORTHO05D001324 2.2e-10 70.1 46 71.7
arahy.Tifrunner.gnm1.ann1.TH0YQP Arachis hypogaea HOM05D000818 ORTHO05D001324 2.8e-10 69.7 46 69.6
CSS0027266 Camellia sinensis var. sinensis HOM05D000818 ORTHO05D001324 2.8e-10 69.7 46 71.7
CSS0039590 Camellia sinensis var. sinensis HOM05D000818 ORTHO05D001324 2.8e-10 69.7 46 71.7
Ca_08069_v3 Cicer arietinum L. HOM05D000818 ORTHO05D001324 2.8e-10 69.7 46 69.6
Medtr7g081705 Medicago truncatula HOM05D000818 ORTHO05D001324 2.8e-10 69.7 46 69.6
Sc02g0003090 Simmondsia chinensis HOM05D000818 ORTHO05D001324 2.8e-10 69.7 46 71.7
CAN.G1473.11 Capsicum annuum HOM05D000818 ORTHO05D001324 3.7e-10 69.3 46 69.6
CiPaw.13G026400 Carya illinoinensis HOM05D000818 ORTHO05D001324 3.7e-10 69.3 46 69.6
Dinv43618 Davidia involucrata HOM05D000818 ORTHO05D001324 4.9e-10 68.9 46 69.6
Oeu024168.1 Olea europaea HOM05D000818 ORTHO05D001324 4.9e-10 68.9 46 69.6
Potri.014G047400 Populus trichocarpa HOM05D000818 ORTHO05D001324 4.9e-10 68.9 46 69.6
Sabra14G0034400 Salix brachista HOM05D000818 ORTHO05D001324 4.9e-10 68.9 46 69.6
Solyc01g090270.4 Solanum lycopersicum HOM05D000818 ORTHO05D001324 4.9e-10 68.9 46 69.6
Sopen01g036060 Solanum pennellii HOM05D000818 ORTHO05D001324 4.9e-10 68.9 46 69.6
PGSC0003DMG400025994 Solanum tuberosum HOM05D000818 ORTHO05D001324 4.9e-10 68.9 46 69.6
Migut.B01537 Erythranthe guttata HOM05D000818 ORTHO05D001324 6.3e-10 68.6 46 69.6
Lj1g0016313 Lotus japonicus HOM05D000818 ORTHO05D001324 6.3e-10 68.6 46 69.6
ClCG06G002500 Citrullus lanatus HOM05D000818 ORTHO05D001324 8.3e-10 68.2 46 69.6
DCAR_029467 Daucus carota HOM05D000818 ORTHO05D001324 8.3e-10 68.2 46 69.6
FAN01G1404 Fragaria x ananassa HOM05D000818 ORTHO05D001324 8.3e-10 68.2 46 69.6
FAN03G2811 Fragaria x ananassa HOM05D000818 ORTHO05D001324 8.3e-10 68.2 46 69.6
MD02G1212400 Malus domestica HOM05D000818 ORTHO05D001324 8.3e-10 68.2 46 69.6
MD07G1108500 Malus domestica HOM05D000818 ORTHO05D001324 8.3e-10 68.2 46 69.6
Prupe.2G131300 Prunus persica HOM05D000818 ORTHO05D001324 8.3e-10 68.2 46 69.6
SalBow5G2839 Salvia bowleyana HOM05D000818 ORTHO05D001324 8.3e-10 68.2 46 69.6
SalBow5G2909 Salvia bowleyana HOM05D000818 ORTHO05D001324 8.3e-10 68.2 46 69.6
vmacro13495 Vaccinium macrocarpon HOM05D000818 ORTHO05D001324 8.3e-10 68.2 46 67.4
arahy.Tifrunner.gnm1.ann1.YC8C9S Arachis hypogaea HOM05D000818 ORTHO05D001324 1.1e-09 67.8 46 67.4
Ciclev10018930m.g Citrus clementina HOM05D000818 ORTHO05D001324 1.1e-09 67.8 46 67.4
MELO3C022278.2 Cucumis melo HOM05D000818 ORTHO05D001324 1.1e-09 67.8 46 69.6
CsaV3_6G008620 Cucumis sativus L. HOM05D000818 ORTHO05D001324 1.1e-09 67.8 46 69.6
Oeu020084.1 Olea europaea HOM05D000818 ORTHO05D001324 1.1e-09 67.8 46 69.6
SalBow5G3905 Salvia bowleyana HOM05D000818 ORTHO05D001324 1.1e-09 67.8 46 67.4
Atru.chr5.129 Acer truncatum HOM05D000818 ORTHO05D001324 1.4e-09 67.4 46 67.4
Actinidia12145 Actinidia chinensis HOM05D000818 ORTHO05D001324 1.4e-09 67.4 46 69.6
Actinidia32501 Actinidia chinensis HOM05D000818 ORTHO05D001324 1.4e-09 67.4 46 69.6
Cpa.g.sc410.2 Carica papaya HOM05D000818 ORTHO05D001324 1.4e-09 67.4 62 56.5
AUR62013745 Chenopodium quinoa HOM05D000818 ORTHO05D001324 1.4e-09 67.4 46 67.4
Rhsim07G0035800 Rhododendron simsii HOM05D000818 ORTHO05D001324 1.4e-09 67.4 46 69.6
TWI14G1028 Tripterygium wilfordii HOM05D000818 ORTHO05D001324 1.4e-09 67.4 46 67.4
TWI59G1205 Tripterygium wilfordii HOM05D000818 ORTHO05D001324 1.4e-09 67.4 46 67.4
EL10Ac1g00760 Beta vulgaris HOM05D000818 ORTHO05D001324 1.8e-09 67.0 46 67.4
CANSAT21G0338 Cannabis sativa HOM05D000818 ORTHO05D001324 1.8e-09 67.0 46 67.4
CANSAT21G2497 Cannabis sativa HOM05D000818 ORTHO05D001324 1.8e-09 67.0 46 67.4
AUR62023406 Chenopodium quinoa HOM05D000818 ORTHO05D001324 1.8e-09 67.0 46 67.4
MBI13_g08645_MAGBIO Magnolia biondii HOM05D000818 ORTHO05D001324 1.8e-09 67.0 46 67.4
Potri.002G137600 Populus trichocarpa HOM05D000818 ORTHO05D001324 1.8e-09 67.0 46 67.4
QL04p030348 Quercus lobata HOM05D000818 ORTHO05D001324 1.8e-09 67.0 46 67.4
Sp1g00160 Schrenkiella parvula HOM05D000818 ORTHO05D001324 1.8e-09 67.0 46 67.4
Thecc.01G394700 Theobroma cacao HOM05D000818 ORTHO05D001324 1.8e-09 67.0 46 67.4
Aa31LG1G26380 Aethionema arabicum HOM05D000818 ORTHO05D001324 2.4e-09 66.6 46 69.6
Ah.05g177850 Amaranthus hybridus HOM05D000818 ORTHO05D001324 2.4e-09 66.6 46 67.4
Carub.0005s2707 Capsella rubella HOM05D000818 ORTHO05D001324 2.4e-09 66.6 46 65.2
ECA234G3360 Erigeron canadensis HOM05D000818 ORTHO05D001324 2.4e-09 66.6 46 67.4
Glyma.09G242800 Glycine max HOM05D000818 ORTHO05D001324 2.4e-09 66.6 75 53.3
Lsat_1_v5_gn_4_39741 Lactuca sativa HOM05D000818 ORTHO05D001324 2.4e-09 66.6 46 67.4
CARHR000220 Cardamine hirsuta HOM05D000818 ORTHO05D001324 3.1e-09 66.2 46 67.4
CiPaw.14G020700 Carya illinoinensis HOM05D000818 ORTHO05D001324 3.1e-09 66.2 46 65.2
Thhalv10006946m.g Eutrema salsugineum HOM05D000818 ORTHO05D001324 3.1e-09 66.2 46 67.4
Glyma.03G111300 Glycine max HOM05D000818 ORTHO05D001324 3.1e-09 66.2 46 67.4
Rhsim01G0140100 Rhododendron simsii HOM05D000818 ORTHO05D001324 3.1e-09 66.2 46 67.4
Hund17087 Selenicereus undatus HOM05D000818 ORTHO05D001324 3.1e-09 66.2 46 65.2
SGA_v2.0_scaffold116G32291 Striga asiatica HOM05D000818 ORTHO05D001324 3.1e-09 66.2 46 65.2
SGA_v2.0_scaffold153G36903 Striga asiatica HOM05D000818 ORTHO05D001324 3.1e-09 66.2 46 67.4
AL5G42540 Arabidopsis lyrata HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 65.2
AT3G60320 Arabidopsis thaliana HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 65.2
BcaB02g08176 Brassica carinata HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 65.2
BcaC02g10147 Brassica carinata HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 65.2
A04p01690 Brassica napus HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 65.2
C04p32320 Brassica napus HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 65.2
BolC4t24782H Brassica oleracea HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 65.2
BraA04t15893Z Brassica rapa HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 65.2
Thhalv10005793m.g Eutrema salsugineum HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 65.2
HanXRQChr17g0562501 Helianthus annuus HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 67.4
PSO675G5646 Papaver somniferum HOM05D000818 ORTHO05D001324 4.1e-09 65.9 45 68.9
PSO732G0390 Papaver somniferum HOM05D000818 ORTHO05D001324 4.1e-09 65.9 45 68.9
Phvul.008G046800 Phaseolus vulgaris HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 67.4
Sp5g02910 Schrenkiella parvula HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 65.2
VMungo1383G0257 Vigna mungo HOM05D000818 ORTHO05D001324 4.1e-09 65.9 46 67.4
AL1G10120 Arabidopsis lyrata HOM05D000818 ORTHO05D001324 5.4e-09 65.5 46 67.4
AT1G02110 Arabidopsis thaliana HOM05D000818 ORTHO05D001324 5.4e-09 65.5 46 67.4
Eucgr.D01227 Eucalyptus grandis HOM05D000818 ORTHO05D001324 5.4e-09 65.5 46 65.2
FAN10G3602 Fragaria x ananassa HOM05D000818 ORTHO05D001324 5.4e-09 65.5 46 67.4
Lj3g0019294 Lotus japonicus HOM05D000818 ORTHO05D001324 5.4e-09 65.5 46 67.4
THA.LOC104817191 Tarenaya hassleriana HOM05D000818 ORTHO05D001324 5.4e-09 65.5 46 65.2
unitig_578.g16711 Utricularia gibba HOM05D000818 ORTHO05D001324 5.4e-09 65.5 90 44.4
CSS0009534 Camellia sinensis var. sinensis HOM05D000818 ORTHO05D001324 7.0e-09 65.1 82 50.0
Duzib133G0528 Durio zibethinus HOM05D000818 ORTHO05D001324 7.0e-09 65.1 45 66.7
FAN10G0853 Fragaria x ananassa HOM05D000818 ORTHO05D001324 7.0e-09 65.1 46 67.4
Gohir.D08G159700 Gossypium hirsutum HOM05D000818 ORTHO05D001324 7.0e-09 65.1 46 65.2
Gorai.004G165900 Gossypium raimondii HOM05D000818 ORTHO05D001324 7.0e-09 65.1 46 65.2
vmacro21058 Vaccinium macrocarpon HOM05D000818 ORTHO05D001324 7.0e-09 65.1 46 65.2
Gohir.A08G138400 Gossypium hirsutum HOM05D000818 ORTHO05D001324 1.2e-08 64.3 46 63.0
Os10g0562700 Oryza sativa ssp. japonica HOM05D000818 ORTHO05D001324 1.2e-08 64.3 46 65.2
Gohir.A11G075400 Gossypium hirsutum HOM05D000818 ORTHO05D001324 1.6e-08 63.9 46 65.2
Manes.05G054700 Manihot esculenta HOM05D000818 ORTHO05D001324 1.6e-08 63.9 46 63.0
VMungo1309G0379 Vigna mungo HOM05D000818 ORTHO05D001324 1.6e-08 63.9 46 65.2
Carub.0004s2741 Capsella rubella HOM05D000818 ORTHO05D001324 2.0e-08 63.5 46 63.0
CARHR170640 Cardamine hirsuta HOM05D000818 ORTHO05D001324 2.0e-08 63.5 46 63.0
Gohir.A08G058500 Gossypium hirsutum HOM05D000818 ORTHO05D001324 2.0e-08 63.5 46 63.0
Gohir.D08G067600 Gossypium hirsutum HOM05D000818 ORTHO05D001324 2.0e-08 63.5 46 63.0
arahy.Tifrunner.gnm1.ann1.27NEX2 Arachis hypogaea HOM05D000818 ORTHO05D001324 2.7e-08 63.2 46 65.2
arahy.Tifrunner.gnm1.ann1.U024VF Arachis hypogaea HOM05D000818 ORTHO05D001324 2.7e-08 63.2 46 65.2
Gorai.004G070400 Gossypium raimondii HOM05D000818 ORTHO05D001324 2.7e-08 63.2 46 63.0
Lalb_Chr03g0040381 Lupinus albus HOM05D000818 ORTHO05D001324 2.7e-08 63.2 46 65.2
Sp4g26930 Schrenkiella parvula HOM05D000818 ORTHO05D001324 2.7e-08 63.2 46 65.2
AL4G43920 Arabidopsis lyrata HOM05D000818 ORTHO05D001324 3.5e-08 62.8 46 60.9
Lj9A557G32 Lonicera japonica HOM05D000818 ORTHO05D001324 3.5e-08 62.8 41 70.7
PGR004G0558 Punica granatum HOM05D000818 ORTHO05D001324 3.5e-08 62.8 46 63.0
COL.COLO4_12411 Corchorus olitorius HOM05D000818 ORTHO05D001324 4.5e-08 62.4 79 45.6
HanXRQChr16g0521311 Helianthus annuus HOM05D000818 ORTHO05D001324 4.5e-08 62.4 46 60.9
TPR.G33133 Trifolium pratense HOM05D000818 ORTHO05D001324 4.5e-08 62.4 46 63.0
Lalb_Chr13g0290601 Lupinus albus HOM05D000818 ORTHO05D001324 5.9e-08 62.0 46 58.7
Cfa011073 Carpinus fangiana HOM05D000818 ORTHO05D001324 7.7e-08 61.6 46 63.0
Cc02_g25100 Coffea canephora HOM05D000818 ORTHO05D001324 7.7e-08 61.6 45 64.4
Haze_02844 Corylus avellana HOM05D000818 ORTHO05D001324 7.7e-08 61.6 46 63.0
Gohir.D11G080100 Gossypium hirsutum HOM05D000818 ORTHO05D001324 7.7e-08 61.6 46 63.0
Gorai.007G085700 Gossypium raimondii HOM05D000818 ORTHO05D001324 7.7e-08 61.6 46 63.0
Medtr8g006850 Medicago truncatula HOM05D000818 ORTHO05D001324 7.7e-08 61.6 46 60.9
Oeu001716.1 Olea europaea HOM05D000818 ORTHO05D001324 7.7e-08 61.6 46 65.2
Phvul.010G050100 Phaseolus vulgaris HOM05D000818 ORTHO05D001324 7.7e-08 61.6 46 63.0
VMungo0331G1446 Vigna mungo HOM05D000818 ORTHO05D001324 7.7e-08 61.6 46 63.0
Duzib138G0248 Durio zibethinus HOM05D000818 ORTHO05D001324 1.0e-07 61.2 46 63.0
unitig_8.g3851 Utricularia gibba HOM05D000818 ORTHO05D001324 1.0e-07 61.2 46 60.9
Zm00001eb023690 Zea mays HOM05D000818 ORTHO05D001324 1.0e-07 61.2 46 63.0
Zm00001eb390970 Zea mays HOM05D000818 ORTHO05D001324 1.0e-07 61.2 46 63.0
ATR0057G102 Amborella trichopoda HOM05D000818 ORTHO05D001324 1.3e-07 60.8 46 63.0
A03p24960 Brassica napus HOM05D000818 ORTHO05D001324 1.7e-07 60.5 46 60.9
C03p29730 Brassica napus HOM05D000818 ORTHO05D001324 1.7e-07 60.5 46 60.9
BolC3t15323H Brassica oleracea HOM05D000818 ORTHO05D001324 1.7e-07 60.5 46 60.9
BraA03t11699Z Brassica rapa HOM05D000818 ORTHO05D001324 1.7e-07 60.5 46 60.9
Carub.0001s0011 Capsella rubella HOM05D000818 ORTHO05D001324 1.7e-07 60.5 46 63.0
Psat4g224960 Pisum sativum HOM05D000818 ORTHO05D001324 1.7e-07 60.5 46 60.9
Ca_25806_v3 Cicer arietinum L. HOM05D000818 ORTHO05D001324 5.0e-07 58.9 46 60.9
THA.LOC104802494 Tarenaya hassleriana HOM05D000818 ORTHO05D001324 6.6e-07 58.5 46 60.9
Migut.N01737 Erythranthe guttata HOM05D000818 ORTHO05D001324 8.6e-07 58.2 46 56.5
Thhalv10001315m.g Eutrema salsugineum HOM05D000818 ORTHO05D001324 1.1e-06 57.8 46 58.7
SEGI_13742 Sequoiadendron giganteum HOM05D000818 ORTHO05D001324 1.9e-06 57.0 45 60.0


User provided reference genes

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