Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0023 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 5.4e-81 304.3 157 100.0
Nn3g19238 Nelumbo nucifera HOM05D005039 ORTHO05D006145 3.2e-49 198.7 107 86.0
Dinv29126 Davidia involucrata HOM05D005039 ORTHO05D006145 1.6e-48 196.4 107 84.1
Nn1g02122 Nelumbo nucifera HOM05D005039 ORTHO05D006145 1.6e-48 196.4 107 85.0
CsaV3_2G014060 Cucumis sativus L. HOM05D005039 ORTHO05D006145 2.7e-48 195.7 107 86.0
PSO063G4466 Papaver somniferum HOM05D005039 ORTHO05D006145 2.7e-48 195.7 107 84.1
PSO782G0889 Papaver somniferum HOM05D005039 ORTHO05D006145 2.7e-48 195.7 107 84.1
CANSAT21G2526 Cannabis sativa HOM05D005039 ORTHO05D006145 6.1e-48 194.5 107 86.0
MELO3C021899.2 Cucumis melo HOM05D005039 ORTHO05D006145 6.1e-48 194.5 107 85.0
HanXRQChr16g0512151 Helianthus annuus HOM05D005039 ORTHO05D006145 6.1e-48 194.5 107 83.2
TWI79G0887 Tripterygium wilfordii HOM05D005039 ORTHO05D006145 6.1e-48 194.5 107 85.0
GSVIVG01024328001 Vitis vinifera HOM05D005039 ORTHO05D006145 1.0e-47 193.7 107 86.0
ATR0829G179 Amborella trichopoda HOM05D005039 ORTHO05D006145 1.8e-47 193.0 107 86.0
AUR62002093 Chenopodium quinoa HOM05D005039 ORTHO05D006145 2.3e-47 192.6 107 85.0
AUR62028211 Chenopodium quinoa HOM05D005039 ORTHO05D006145 2.3e-47 192.6 107 85.0
FAN10G2688 Fragaria x ananassa HOM05D005039 ORTHO05D006145 3.0e-47 192.2 107 83.2
Aqoxy1G03063 Aquilegia oxysepala HOM05D005039 ORTHO05D006145 3.9e-47 191.8 106 84.0
Thecc.05G222600 Theobroma cacao HOM05D005039 ORTHO05D006145 5.1e-47 191.4 107 85.0
Actinidia08765 Actinidia chinensis HOM05D005039 ORTHO05D006145 6.7e-47 191.0 107 84.1
Actinidia24520 Actinidia chinensis HOM05D005039 ORTHO05D006145 6.7e-47 191.0 107 84.1
FvH4_7g34230 Fragaria vesca HOM05D005039 ORTHO05D006145 6.7e-47 191.0 107 83.2
FAN01G1789 Fragaria x ananassa HOM05D005039 ORTHO05D006145 6.7e-47 191.0 107 83.2
Potri.013G077700 Populus trichocarpa HOM05D005039 ORTHO05D006145 1.1e-46 190.3 108 85.2
Sed0001134 Sechium edule HOM05D005039 ORTHO05D006145 1.1e-46 190.3 107 83.2
TAR629G1612 Trochodendron aralioides HOM05D005039 ORTHO05D006145 1.5e-46 189.9 107 82.2
MD01G1239200 Malus domestica HOM05D005039 ORTHO05D006145 2.0e-46 189.5 106 83.0
MD07G1310900 Malus domestica HOM05D005039 ORTHO05D006145 2.0e-46 189.5 106 83.0
Hund09811 Selenicereus undatus HOM05D005039 ORTHO05D006145 2.0e-46 189.5 107 84.1
EL10Ac3g05043 Beta vulgaris HOM05D005039 ORTHO05D006145 2.6e-46 189.1 107 82.2
PGR142G1194 Punica granatum HOM05D005039 ORTHO05D006145 2.6e-46 189.1 107 83.2
RcHm_v2.0_Chr1g0384591 Rosa chinensis HOM05D005039 ORTHO05D006145 2.6e-46 189.1 106 84.0
SEGI_13634 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 2.6e-46 189.1 108 83.3
CSS0008859 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 3.3e-46 188.7 107 81.3
Cfa016075 Carpinus fangiana HOM05D005039 ORTHO05D006145 4.4e-46 188.3 107 80.4
CiPaw.05G212800 Carya illinoinensis HOM05D005039 ORTHO05D006145 7.4e-46 187.6 105 81.9
Duzib128G1855 Durio zibethinus HOM05D005039 ORTHO05D006145 1.3e-45 186.8 107 82.2
MBI04_g12218_MAGBIO Magnolia biondii HOM05D005039 ORTHO05D006145 1.7e-45 186.4 107 81.3
Sabra13G0066500 Salix brachista HOM05D005039 ORTHO05D006145 1.7e-45 186.4 108 84.3
SalBow7G2894 Salvia bowleyana HOM05D005039 ORTHO05D006145 1.7e-45 186.4 107 79.4
QL09p020758 Quercus lobata HOM05D005039 ORTHO05D006145 2.2e-45 186.0 107 78.5
Cc02_g00100 Coffea canephora HOM05D005039 ORTHO05D006145 2.8e-45 185.7 107 82.2
vmacro06372 Vaccinium macrocarpon HOM05D005039 ORTHO05D006145 2.8e-45 185.7 107 81.3
Ah.13g072370 Amaranthus hybridus HOM05D005039 ORTHO05D006145 3.7e-45 185.3 107 83.2
Lalb_Chr09g0320081 Lupinus albus HOM05D005039 ORTHO05D006145 3.7e-45 185.3 107 81.3
Aa31LG2G2190 Aethionema arabicum HOM05D005039 ORTHO05D006145 4.8e-45 184.9 107 82.2
Duzib106G2059 Durio zibethinus HOM05D005039 ORTHO05D006145 4.8e-45 184.9 107 81.3
Sc13g0011000 Simmondsia chinensis HOM05D005039 ORTHO05D006145 4.8e-45 184.9 107 81.3
Atru.chr12.1876 Acer truncatum HOM05D005039 ORTHO05D006145 1.1e-44 183.7 107 79.4
Carub.0002s1015 Capsella rubella HOM05D005039 ORTHO05D006145 1.1e-44 183.7 107 80.4
AT1G64990 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 1.4e-44 183.3 107 80.4
MSTRG.24939 Avicennia marina HOM05D005039 ORTHO05D006145 1.4e-44 183.3 107 79.4
BcaC09g50566 Brassica carinata HOM05D005039 ORTHO05D006145 1.4e-44 183.3 107 83.2
A01p18920 Brassica napus HOM05D005039 ORTHO05D006145 1.4e-44 183.3 107 83.2
C01p23870 Brassica napus HOM05D005039 ORTHO05D006145 1.4e-44 183.3 107 83.2
BolC1t02332H Brassica oleracea HOM05D005039 ORTHO05D006145 1.4e-44 183.3 107 83.2
BraA01t01833Z Brassica rapa HOM05D005039 ORTHO05D006145 1.4e-44 183.3 107 83.2
Migut.C00159 Erythranthe guttata HOM05D005039 ORTHO05D006145 1.4e-44 183.3 107 79.4
Nitab4.5_0009864g0010 Nicotiana tabacum HOM05D005039 ORTHO05D006145 1.4e-44 183.3 107 80.4
Carub.0007s1322 Capsella rubella HOM05D005039 ORTHO05D006145 1.8e-44 183.0 107 82.2
Gohir.A02G125900 Gossypium hirsutum HOM05D005039 ORTHO05D006145 1.8e-44 183.0 107 80.4
Gohir.D03G054700 Gossypium hirsutum HOM05D005039 ORTHO05D006145 1.8e-44 183.0 107 80.4
Gorai.003G057600 Gossypium raimondii HOM05D005039 ORTHO05D006145 1.8e-44 183.0 107 80.4
CAN.G437.12 Capsicum annuum HOM05D005039 ORTHO05D006145 2.4e-44 182.6 107 79.4
Lsat_1_v5_gn_9_47921 Lactuca sativa HOM05D005039 ORTHO05D006145 2.4e-44 182.6 107 79.4
Sopen07g023860 Solanum pennellii HOM05D005039 ORTHO05D006145 2.4e-44 182.6 107 78.5
SGA_v2.0_scaffold188G40301 Striga asiatica HOM05D005039 ORTHO05D006145 2.4e-44 182.6 107 79.4
Thhalv10025115m.g Eutrema salsugineum HOM05D005039 ORTHO05D006145 3.1e-44 182.2 107 82.2
FAN03G0337 Fragaria x ananassa HOM05D005039 ORTHO05D006145 3.1e-44 182.2 109 80.7
Solyc07g045330.3 Solanum lycopersicum HOM05D005039 ORTHO05D006145 3.1e-44 182.2 107 78.5
CARHR056390 Cardamine hirsuta HOM05D005039 ORTHO05D006145 4.1e-44 181.8 107 80.4
CARHR235330 Cardamine hirsuta HOM05D005039 ORTHO05D006145 4.1e-44 181.8 107 82.2
Glyma.11G109900 Glycine max HOM05D005039 ORTHO05D006145 4.1e-44 181.8 107 80.4
Glyma.12G014800 Glycine max HOM05D005039 ORTHO05D006145 4.1e-44 181.8 107 79.4
Manes.08G160900 Manihot esculenta HOM05D005039 ORTHO05D006145 4.1e-44 181.8 107 81.3
HPP92_014410 Vanilla planifolia HOM05D005039 ORTHO05D006145 4.1e-44 181.8 107 80.4
Lj3g0003232 Lotus japonicus HOM05D005039 ORTHO05D006145 6.9e-44 181.0 107 82.2
Sp7g25580 Schrenkiella parvula HOM05D005039 ORTHO05D006145 6.9e-44 181.0 107 81.3
AT4G27630 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 9.1e-44 180.6 107 81.3
Rhsim03G0224300 Rhododendron simsii HOM05D005039 ORTHO05D006145 9.1e-44 180.6 125 72.0
AL2G19600 Arabidopsis lyrata HOM05D005039 ORTHO05D006145 1.2e-43 180.3 107 78.5
arahy.Tifrunner.gnm1.ann1.GG16T8 Arachis hypogaea HOM05D005039 ORTHO05D006145 1.2e-43 180.3 107 79.4
arahy.Tifrunner.gnm1.ann1.IZT0PT Arachis hypogaea HOM05D005039 ORTHO05D006145 1.2e-43 180.3 107 79.4
THA.LOC104805716 Tarenaya hassleriana HOM05D005039 ORTHO05D006145 1.2e-43 180.3 107 80.4
BcaNung01651 Brassica carinata HOM05D005039 ORTHO05D006145 1.5e-43 179.9 107 81.3
Phvul.011G017800 Phaseolus vulgaris HOM05D005039 ORTHO05D006145 1.5e-43 179.9 107 80.4
PGSC0003DMG402017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 1.5e-43 179.9 107 76.6
VMungo1127G0275 Vigna mungo HOM05D005039 ORTHO05D006145 2.6e-43 179.1 107 80.4
BcaB05g25317 Brassica carinata HOM05D005039 ORTHO05D006145 3.4e-43 178.7 107 80.4
A02p12960 Brassica napus HOM05D005039 ORTHO05D006145 3.4e-43 178.7 107 80.4
C02p21070 Brassica napus HOM05D005039 ORTHO05D006145 3.4e-43 178.7 107 80.4
BolC2t08248H Brassica oleracea HOM05D005039 ORTHO05D006145 3.4e-43 178.7 107 80.4
BraA02t06350Z Brassica rapa HOM05D005039 ORTHO05D006145 3.4e-43 178.7 107 80.4
Sp5g19320 Schrenkiella parvula HOM05D005039 ORTHO05D006145 3.4e-43 178.7 107 80.4
Ca_26497_v3 Cicer arietinum L. HOM05D005039 ORTHO05D006145 7.7e-43 177.6 107 80.4
Ciclev10031435m.g Citrus clementina HOM05D005039 ORTHO05D006145 1.0e-42 177.2 107 80.4
Medtr5g005440 Medicago truncatula HOM05D005039 ORTHO05D006145 1.0e-42 177.2 107 80.4
unitig_0.g2070 Utricularia gibba HOM05D005039 ORTHO05D006145 1.3e-42 176.8 106 78.3
Nitab4.5_0006992g0040 Nicotiana tabacum HOM05D005039 ORTHO05D006145 6.5e-42 174.5 118 72.9
Oeu027894.4 Olea europaea HOM05D005039 ORTHO05D006145 2.5e-41 172.6 130 66.9
Zm00001eb430290 Zea mays HOM05D005039 ORTHO05D006145 5.5e-41 171.4 107 75.7
ECA232G0266 Erigeron canadensis HOM05D005039 ORTHO05D006145 4.7e-40 168.3 101 78.2
Os04g0600800 Oryza sativa ssp. japonica HOM05D005039 ORTHO05D006145 6.1e-40 167.9 107 75.7
Mapoly0094s0006 Marchantia polymorpha HOM05D005039 ORTHO05D006145 1.8e-39 166.4 107 72.9
SMO304G0068 Selaginella moellendorffii HOM05D005039 ORTHO05D006145 8.2e-37 157.5 98 71.4
AagrBONN_evm.TU.Sc2ySwM_117.727 Anthoceros agrestis HOM05D005039 ORTHO05D006145 1.1e-33 147.1 107 61.7
Eucgr.K00067 Eucalyptus grandis HOM05D005039 ORTHO05D006145 9.4e-33 144.1 87 81.6
Peaxi162Scf00802g00029 Petunia axillaris HOM05D005039 ORTHO05D006145 9.4e-33 144.1 107 71.0
CBR_g72647 Chara braunii HOM05D005039 ORTHO05D006145 7.0e-28 127.9 105 58.1
COL.COLO4_15138 Corchorus olitorius HOM05D005039 ORTHO05D006145 1.6e-27 126.7 72 84.7
Haze_00371 Corylus avellana HOM05D005039 ORTHO05D006145 2.0e-27 126.3 72 81.9
CSS0032758 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 2.7e-27 125.9 91 70.3
ClCG09G017320 Citrullus lanatus HOM05D005039 ORTHO05D006145 3.5e-27 125.6 72 84.7
Cpa.g.sc43.136 Carica papaya HOM05D005039 ORTHO05D006145 4.5e-27 125.2 72 81.9
CSS0031224 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 1.1e-25 120.6 74 78.4
CARHR057320 Cardamine hirsuta HOM05D005039 ORTHO05D006145 1.6e-24 116.7 66 84.8
SHI14975 Sapria himalayana HOM05D000023 ORTHO05D000014 5.2e-23 111.7 79 73.4
Cre16.g674739 Chlamydomonas reinhardtii HOM05D005039 ORTHO05D006145 2.8e-13 79.3 97 41.2
ClCG09G017310 Citrullus lanatus HOM05D005039 ORTHO05D006145 3.8e-10 68.9 35 80.0
Psat7g155320 Pisum sativum HOM05D005039 ORTHO05D006145 1.2e-08 63.9 34 79.4
Solyc07g045270.2 Solanum lycopersicum HOM05D005039 ORTHO05D006145 1.0e-07 60.8 32 78.1


User provided reference genes

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