Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.7e-45 185.7 94 100.0
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 2.9e-37 158.3 90 84.4
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 8.4e-37 156.8 90 84.4
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 8.4e-37 156.8 90 83.3
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 1.1e-36 156.4 90 82.2
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 1.4e-36 156.0 90 84.4
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 1.9e-36 155.6 90 82.2
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 4.2e-36 154.5 90 83.3
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 5.4e-36 154.1 90 84.4
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 7.1e-36 153.7 90 81.1
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 1.2e-35 152.9 88 81.8
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 1.6e-35 152.5 90 78.9
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.6e-35 152.5 90 83.3
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 1.6e-35 152.5 90 82.2
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 2.7e-35 151.8 88 85.2
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 2.7e-35 151.8 88 83.0
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 3.5e-35 151.4 92 79.3
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 4.6e-35 151.0 89 78.7
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 4.6e-35 151.0 88 81.8
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 4.6e-35 151.0 88 83.0
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 4.6e-35 151.0 91 81.3
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 7.9e-35 150.2 86 82.6
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 1.0e-34 149.8 90 77.8
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 1.0e-34 149.8 90 77.8
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 1.8e-34 149.1 90 82.2
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 2.3e-34 148.7 89 77.5
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 2.3e-34 148.7 85 83.5
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 2.3e-34 148.7 90 77.8
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 2.3e-34 148.7 89 82.0
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 3.0e-34 148.3 86 81.4
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 3.0e-34 148.3 88 79.5
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 3.0e-34 148.3 90 80.0
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 3.0e-34 148.3 89 80.9
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 3.9e-34 147.9 90 78.9
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 3.9e-34 147.9 93 76.3
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 3.9e-34 147.9 93 74.2
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 5.1e-34 147.5 92 79.3
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 5.1e-34 147.5 90 80.0
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 6.7e-34 147.1 90 80.0
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 6.7e-34 147.1 88 80.7
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 1.1e-33 146.4 90 76.7
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 1.1e-33 146.4 93 74.2
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.1e-33 146.4 93 74.2
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.1e-33 146.4 93 74.2
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 1.1e-33 146.4 92 78.3
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.5e-33 146.0 90 77.8
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 1.9e-33 145.6 88 79.5
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 1.9e-33 145.6 88 78.4
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.9e-33 145.6 92 77.2
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 2.5e-33 145.2 90 77.8
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 4.3e-33 144.4 92 76.1
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 4.3e-33 144.4 92 76.1
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 5.6e-33 144.1 92 76.1
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 5.6e-33 144.1 92 76.1
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 5.6e-33 144.1 92 76.1
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 5.6e-33 144.1 92 77.2
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 7.4e-33 143.7 92 76.1
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 7.4e-33 143.7 85 77.6
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 7.4e-33 143.7 84 83.3
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 9.6e-33 143.3 90 75.6
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 9.6e-33 143.3 88 77.3
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 9.6e-33 143.3 88 77.3
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 1.6e-32 142.5 92 76.1
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 1.6e-32 142.5 90 77.8
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 2.1e-32 142.1 85 77.6
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 2.8e-32 141.7 90 75.6
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 2.8e-32 141.7 88 77.3
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 3.7e-32 141.4 92 75.0
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 3.7e-32 141.4 88 77.3
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 3.7e-32 141.4 86 77.9
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 4.8e-32 141.0 88 75.0
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 6.2e-32 140.6 92 75.0
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 6.2e-32 140.6 90 74.4
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 8.1e-32 140.2 92 73.9
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 8.1e-32 140.2 88 76.1
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 2.4e-31 138.7 86 76.7
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 4.0e-31 137.9 88 73.9
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 4.0e-31 137.9 104 66.3
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 4.0e-31 137.9 88 75.0
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 1.5e-30 136.0 83 79.5
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 5.8e-30 134.0 88 73.9
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.3e-29 132.9 67 98.5
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.7e-29 132.5 105 62.9
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 2.9e-29 131.7 74 82.4
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 3.8e-29 131.3 126 56.3
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 1.2e-27 126.3 74 81.1
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 6.0e-27 124.0 69 85.5
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 7.9e-27 123.6 70 80.0
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 2.3e-26 122.1 78 73.1
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 2.3e-26 122.1 78 73.1
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 6.7e-26 120.6 75 77.3
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 5.6e-25 117.5 67 82.1
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 9.6e-25 116.7 67 83.6
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.6e-24 115.9 68 82.4
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 4.8e-24 114.4 139 48.2
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 1.8e-23 112.5 71 76.1
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 4.0e-23 111.3 81 63.0
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 4.0e-23 111.3 69 73.9
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 6.9e-23 110.5 67 74.6
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 2.0e-22 109.0 66 80.3
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 5.8e-22 107.5 66 78.8
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 1.0e-21 106.7 67 70.1
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 4.9e-21 104.4 65 72.3
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 1.0e-18 96.7 75 60.0
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 2.3e-18 95.5 81 58.0
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 1.1e-17 93.2 65 63.1
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 4.1e-15 84.7 67 64.2
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 1.5e-14 82.8 45 82.2
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 4.2e-12 74.7 71 49.3
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 4.6e-11 71.2 88 48.9
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 2.0e-09 65.9 80 46.2


User provided reference genes

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