Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0010 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 2.0e-90 335.9 184 100.0
CDE02G4728 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 6.0e-79 297.7 177 91.0
Eucgr.D02068 Eucalyptus grandis HOM05D006466 ORTHO05D008084 2.4e-35 152.9 186 52.7
Gohir.A12G217700 Gossypium hirsutum HOM05D006466 ORTHO05D008084 3.1e-35 152.5 191 53.4
Ciclev10005762m.g Citrus clementina HOM05D006466 ORTHO05D008084 6.9e-35 151.4 196 52.0
Lj1A353T9 Lonicera japonica HOM05D006466 ORTHO05D008084 2.6e-34 149.4 185 52.4
Gorai.008G235900 Gossypium raimondii HOM05D006466 ORTHO05D008084 4.5e-34 148.7 191 52.4
Sabra01G0094900 Salix brachista HOM05D006466 ORTHO05D008084 4.5e-34 148.7 191 51.8
Thecc.03G253200 Theobroma cacao HOM05D006466 ORTHO05D008084 4.5e-34 148.7 188 52.7
CsaV3_5G004180 Cucumis sativus L. HOM05D006466 ORTHO05D008084 1.0e-33 147.5 182 51.1
Gohir.D12G220200 Gossypium hirsutum HOM05D006466 ORTHO05D008084 1.0e-33 147.5 191 52.4
GSVIVG01001313001 Vitis vinifera HOM05D006466 ORTHO05D008084 1.0e-33 147.5 177 52.5
MELO3C005537.2 Cucumis melo HOM05D006466 ORTHO05D008084 1.7e-33 146.7 182 51.1
ClCG01G004000 Citrullus lanatus HOM05D006466 ORTHO05D008084 2.9e-33 146.0 179 54.7
Potri.001G123200 Populus trichocarpa HOM05D006466 ORTHO05D008084 5.0e-33 145.2 191 52.9
QL12p012545 Quercus lobata HOM05D006466 ORTHO05D008084 6.5e-33 144.8 199 51.3
Cfa012739 Carpinus fangiana HOM05D006466 ORTHO05D008084 3.2e-32 142.5 190 49.5
Actinidia27463 Actinidia chinensis HOM05D006466 ORTHO05D008084 5.5e-32 141.7 188 52.1
Haze_07889 Corylus avellana HOM05D006466 ORTHO05D008084 9.3e-32 141.0 189 49.2
Hma1.2p1_2380F.1_g320960 Hydrangea macrophylla HOM05D006466 ORTHO05D008084 2.1e-31 139.8 199 49.2
TWI81G0148 Tripterygium wilfordii HOM05D006466 ORTHO05D008084 2.7e-31 139.4 200 48.5
CiPaw.11G153200 Carya illinoinensis HOM05D006466 ORTHO05D008084 4.6e-31 138.7 182 49.5
Nn1g01036 Nelumbo nucifera HOM05D006466 ORTHO05D008084 7.9e-31 137.9 182 51.1
Ah.12g056750 Amaranthus hybridus HOM05D006466 ORTHO05D008084 1.0e-30 137.5 200 48.5
PGR031G1557 Punica granatum HOM05D006466 ORTHO05D008084 1.0e-30 137.5 184 52.7
Sed0012351 Sechium edule HOM05D006466 ORTHO05D008084 1.3e-30 137.1 179 52.5
PSO170G1975 Papaver somniferum HOM05D006466 ORTHO05D008084 5.1e-30 135.2 186 48.9
TAR375G0032 Trochodendron aralioides HOM05D006466 ORTHO05D008084 5.1e-30 135.2 180 51.1
PSO528G0015 Papaver somniferum HOM05D006466 ORTHO05D008084 6.7e-30 134.8 184 48.9
Solyc08g078740.1 Solanum lycopersicum HOM05D006466 ORTHO05D008084 6.7e-30 134.8 196 46.4
Sopen08g027210 Solanum pennellii HOM05D006466 ORTHO05D008084 6.7e-30 134.8 196 46.4
PGSC0003DMG401004755 Solanum tuberosum HOM05D006466 ORTHO05D008084 1.5e-29 133.7 194 47.4
FAN04G2180 Fragaria x ananassa HOM05D006466 ORTHO05D008084 5.7e-29 131.7 192 49.0
Nitab4.5_0000312g0170 Nicotiana tabacum HOM05D006466 ORTHO05D008084 5.7e-29 131.7 194 45.9
RcHm_v2.0_Chr7g0203001 Rosa chinensis HOM05D006466 ORTHO05D008084 5.7e-29 131.7 190 48.4
Dinv39131 Davidia involucrata HOM05D006466 ORTHO05D008084 9.7e-29 131.0 190 48.4
Sed0026776 Sechium edule HOM05D006466 ORTHO05D008084 1.3e-28 130.6 182 50.5
MSTRG.12091 Avicennia marina HOM05D006466 ORTHO05D008084 2.2e-28 129.8 202 46.5
Lsat_1_v5_gn_3_521 Lactuca sativa HOM05D006466 ORTHO05D008084 1.1e-27 127.5 194 44.8
Manes.15G178500 Manihot esculenta HOM05D006466 ORTHO05D008084 1.4e-27 127.1 190 46.8
Nitab4.5_0008481g0010 Nicotiana tabacum HOM05D006466 ORTHO05D008084 1.8e-27 126.7 193 46.1
Manes.01G079600 Manihot esculenta HOM05D006466 ORTHO05D008084 2.4e-27 126.3 189 47.1
SHI10480 Sapria himalayana HOM05D006466 ORTHO05D008084 3.1e-27 125.9 184 46.2
Nn6g33981 Nelumbo nucifera HOM05D006466 ORTHO05D008084 4.1e-27 125.6 132 53.8
HPP92_014482 Vanilla planifolia HOM05D006466 ORTHO05D008084 5.3e-27 125.2 201 46.3
Aqoxy6G01886 Aquilegia oxysepala HOM05D006466 ORTHO05D008084 6.9e-27 124.8 206 47.6
Manes.15G178400 Manihot esculenta HOM05D006466 ORTHO05D008084 1.2e-26 124.0 190 45.3
Medtr4g101030 Medicago truncatula HOM05D006466 ORTHO05D008084 1.5e-26 123.6 198 44.9
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 3.4e-26 122.5 194 46.9
FAN18G0606 Fragaria x ananassa HOM05D006466 ORTHO05D008084 3.4e-26 122.5 189 46.0
GSVIVG01030884001 Vitis vinifera HOM05D006466 ORTHO05D008084 3.4e-26 122.5 177 46.9
FvH4_5g18710 Fragaria vesca HOM05D006466 ORTHO05D008084 7.7e-26 121.3 189 46.0
ATR0193G040 Amborella trichopoda HOM05D006466 ORTHO05D008084 1.0e-25 120.9 134 55.2
FAN13G1623 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.0e-25 120.9 189 46.0
Lj4g0024258 Lotus japonicus HOM05D006466 ORTHO05D008084 1.3e-25 120.6 132 51.5
Atru.chr2.1841 Acer truncatum HOM05D006466 ORTHO05D008084 1.7e-25 120.2 188 46.3
unitig_61.g26196 Utricularia gibba HOM05D006466 ORTHO05D008084 6.5e-25 118.2 204 44.6
Prupe.5G071300 Prunus persica HOM05D006466 ORTHO05D008084 1.1e-24 117.5 128 54.7
CANSAT21G1921 Cannabis sativa HOM05D006466 ORTHO05D008084 1.9e-24 116.7 200 44.5
TPR.G37616 Trifolium pratense HOM05D006466 ORTHO05D008084 1.9e-24 116.7 202 44.1
Migut.A00968 Erythranthe guttata HOM05D006466 ORTHO05D008084 5.5e-24 115.2 166 47.0
Sp7g15110 Schrenkiella parvula HOM05D006466 ORTHO05D008084 5.5e-24 115.2 218 39.9
BcaNung02868 Brassica carinata HOM05D006466 ORTHO05D008084 7.2e-24 114.8 216 42.1
Aa31LG2G12660 Aethionema arabicum HOM05D006466 ORTHO05D008084 9.4e-24 114.4 208 42.8
Cpa.g.sc29.144 Carica papaya HOM05D006466 ORTHO05D008084 9.4e-24 114.4 187 47.6
Carub.0007s2494 Capsella rubella HOM05D006466 ORTHO05D008084 1.2e-23 114.0 220 42.3
Psat4g071640 Pisum sativum HOM05D006466 ORTHO05D008084 1.6e-23 113.6 165 42.4
CARHR222950 Cardamine hirsuta HOM05D006466 ORTHO05D008084 2.1e-23 113.2 218 41.3
FAN08G0853 Fragaria x ananassa HOM05D006466 ORTHO05D008084 2.1e-23 113.2 159 45.9
SalBow6G4398 Salvia bowleyana HOM05D006466 ORTHO05D008084 2.7e-23 112.8 155 47.1
Cc08_g12600 Coffea canephora HOM05D006466 ORTHO05D008084 6.1e-23 111.7 145 46.2
SGA_v2.0_scaffold120G32877 Striga asiatica HOM05D006466 ORTHO05D008084 6.1e-23 111.7 196 43.9
Phvul.003G219800 Phaseolus vulgaris HOM05D006466 ORTHO05D008084 7.9e-23 111.3 187 44.9
ECA232G3467 Erigeron canadensis HOM05D006466 ORTHO05D008084 2.3e-22 109.8 196 40.8
Lalb_Chr16g0389331 Lupinus albus HOM05D006466 ORTHO05D008084 3.9e-22 109.0 161 46.0
MD04G1088600 Malus domestica HOM05D006466 ORTHO05D008084 3.9e-22 109.0 175 44.6
Rhsim07G0108000 Rhododendron simsii HOM05D006466 ORTHO05D008084 5.1e-22 108.6 141 49.6
Thhalv10026056m.g Eutrema salsugineum HOM05D006466 ORTHO05D008084 8.8e-22 107.8 221 41.2
arahy.Tifrunner.gnm1.ann1.LISY29 Arachis hypogaea HOM05D006466 ORTHO05D008084 4.3e-21 105.5 203 39.9
Lj8A452G56 Lonicera japonica HOM05D006466 ORTHO05D008084 9.7e-21 104.4 119 52.9
BcaC06g33488 Brassica carinata HOM05D006466 ORTHO05D008084 3.7e-20 102.4 217 39.2
C07p47980 Brassica napus HOM05D006466 ORTHO05D008084 3.7e-20 102.4 217 39.2
BolC7t45321H Brassica oleracea HOM05D006466 ORTHO05D008084 3.7e-20 102.4 217 39.2
AL7G38350 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 4.8e-20 102.1 217 38.7
AL7G38400 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 4.8e-20 102.1 217 38.7
Peaxi162Scf00002g00172 Petunia axillaris HOM05D006466 ORTHO05D008084 1.1e-19 100.9 221 37.1
VMungo0251G3296 Vigna mungo HOM05D006466 ORTHO05D008084 2.4e-19 99.8 190 40.5
A03p49940 Brassica napus HOM05D006466 ORTHO05D008084 5.3e-19 98.6 215 38.1
BraA03t14087Z Brassica rapa HOM05D006466 ORTHO05D008084 5.3e-19 98.6 215 38.1
Eucgr.D02058 Eucalyptus grandis HOM05D006466 ORTHO05D008084 9.1e-19 97.8 177 42.4
arahy.Tifrunner.gnm1.ann1.HK6I2L Arachis hypogaea HOM05D006466 ORTHO05D008084 4.5e-18 95.5 198 38.9
SEGI_30297 Sequoiadendron giganteum HOM05D006466 ORTHO05D008084 4.5e-18 95.5 206 37.9
arahy.Tifrunner.gnm1.ann1.VT8LY8 Arachis hypogaea HOM05D006466 ORTHO05D008084 2.9e-17 92.8 200 39.5
Os10g0507500 Oryza sativa ssp. japonica HOM05D006466 ORTHO05D008084 5.0e-17 92.0 218 36.7
AUR62039958 Chenopodium quinoa HOM05D006466 ORTHO05D008084 6.5e-17 91.7 185 41.1
AT4G16535 Arabidopsis thaliana HOM05D006466 ORTHO05D008084 5.5e-16 88.6 216 37.0
Ca_21959_v3 Cicer arietinum L. HOM05D006466 ORTHO05D008084 2.1e-15 86.7 154 39.0
AUR62007505 Chenopodium quinoa HOM05D006466 ORTHO05D008084 1.8e-14 83.6 194 36.6
Oeu019590.1 Olea europaea HOM05D006466 ORTHO05D008084 4.4e-13 79.0 195 40.0
arahy.Tifrunner.gnm1.ann1.AC5BZW Arachis hypogaea HOM05D006466 ORTHO05D008084 3.7e-12 75.9 187 38.0
arahy.Tifrunner.gnm1.ann1.MY6G43 Arachis hypogaea HOM05D006466 ORTHO05D008084 6.3e-12 75.1 197 35.5
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 8.2e-12 74.7 197 33.5
HanXRQChr02g0051581 Helianthus annuus HOM05D006466 ORTHO05D008084 1.8e-11 73.6 87 52.9
Glyma.17G140900 Glycine max HOM05D006466 ORTHO05D008084 2.0e-10 70.1 193 34.7
Mapoly0015s0012 Marchantia polymorpha HOM05D006466 ORTHO05D008084 7.7e-10 68.2 229 31.9
Actinidia05202 Actinidia chinensis HOM05D006466 ORTHO05D008084 1.0e-09 67.8 86 53.5
BcaC04g19403 Brassica carinata HOM05D006466 ORTHO05D008084 3.8e-09 65.9 86 47.7
BolC9t58475H Brassica oleracea HOM05D006466 ORTHO05D008084 3.8e-09 65.9 86 47.7
Sc22g0000810 Simmondsia chinensis HOM05D006466 ORTHO05D008084 8.0e-07 58.2 92 41.3
BcaC01g01648 Brassica carinata HOM05D006466 ORTHO05D008084 1.0e-06 57.8 98 35.7
Pp3c3_19850 Physcomitrium patens HOM05D006466 ORTHO05D008084 2.3e-06 56.6 212 28.8


User provided reference genes

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