Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 1.5e-74 282.7 140 100.0
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 1.1e-64 250.0 140 87.9
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 1.3e-38 163.3 138 60.9
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 1.5e-37 159.8 139 61.2
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 7.3e-37 157.5 140 58.6
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 1.6e-36 156.4 134 60.4
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 3.6e-36 155.2 139 59.0
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 4.8e-36 154.8 139 59.7
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 6.2e-36 154.5 131 61.1
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 6.2e-36 154.5 135 63.0
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 2.4e-35 152.5 139 57.6
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 3.1e-35 152.1 134 59.0
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 4.0e-35 151.8 146 54.8
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 4.0e-35 151.8 140 59.3
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 5.3e-35 151.4 139 56.8
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 6.9e-35 151.0 140 58.6
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 9.0e-35 150.6 139 58.3
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 1.2e-34 150.2 128 61.7
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 2.0e-34 149.4 138 55.1
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 2.0e-34 149.4 139 57.6
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 2.6e-34 149.1 140 57.1
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 3.4e-34 148.7 138 57.2
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 3.4e-34 148.7 137 59.9
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 4.5e-34 148.3 142 54.9
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 4.5e-34 148.3 134 60.4
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 5.8e-34 147.9 123 61.0
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 7.6e-34 147.5 146 56.2
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 7.6e-34 147.5 134 59.0
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 9.9e-34 147.1 148 55.4
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 1.7e-33 146.4 139 57.6
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 1.7e-33 146.4 139 56.8
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 1.7e-33 146.4 137 56.9
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 1.7e-33 146.4 143 56.6
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 1.7e-33 146.4 127 61.4
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 2.2e-33 146.0 127 59.1
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 2.2e-33 146.0 148 55.4
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 2.9e-33 145.6 139 56.8
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 2.9e-33 145.6 123 61.8
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 2.9e-33 145.6 134 56.0
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 3.8e-33 145.2 138 58.0
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 6.4e-33 144.4 137 56.9
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 6.4e-33 144.4 137 56.9
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 6.4e-33 144.4 140 54.3
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 8.4e-33 144.1 141 56.0
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 8.4e-33 144.1 141 54.6
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 1.4e-32 143.3 136 55.9
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 1.9e-32 142.9 144 54.9
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 4.2e-32 141.7 121 61.2
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 4.2e-32 141.7 145 53.8
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 4.2e-32 141.7 141 53.2
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 4.2e-32 141.7 139 55.4
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 9.3e-32 140.6 137 52.6
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 9.3e-32 140.6 136 55.9
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 1.2e-31 140.2 131 55.7
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 1.6e-31 139.8 143 55.2
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 1.6e-31 139.8 136 53.7
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 1.6e-31 139.8 136 53.7
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 2.1e-31 139.4 136 54.4
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 2.1e-31 139.4 136 54.4
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 2.1e-31 139.4 140 52.9
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 2.1e-31 139.4 141 53.9
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 2.1e-31 139.4 145 51.7
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 2.1e-31 139.4 128 58.6
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 2.1e-31 139.4 139 54.0
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 2.7e-31 139.0 127 55.9
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 3.5e-31 138.7 127 56.7
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 4.6e-31 138.3 138 55.8
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 4.6e-31 138.3 136 53.7
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 7.9e-31 137.5 139 51.1
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 1.0e-30 137.1 141 52.5
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 1.3e-30 136.7 141 53.9
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 1.3e-30 136.7 147 52.4
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 1.8e-30 136.3 141 51.8
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 2.3e-30 136.0 126 54.8
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 3.0e-30 135.6 136 54.4
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 5.1e-30 134.8 143 53.8
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 6.7e-30 134.4 141 53.9
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 6.7e-30 134.4 127 55.1
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 8.7e-30 134.0 140 55.0
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 1.1e-29 133.7 138 54.3
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 1.1e-29 133.7 127 57.5
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 1.1e-29 133.7 123 56.1
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 1.5e-29 133.3 131 55.7
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 1.9e-29 132.9 144 51.4
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 2.5e-29 132.5 126 57.1
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 3.3e-29 132.1 128 54.7
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 4.3e-29 131.7 152 52.6
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 9.6e-29 130.6 141 53.2
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 9.6e-29 130.6 141 50.4
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 9.6e-29 130.6 138 55.8
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 1.3e-28 130.2 142 50.7
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 1.3e-28 130.2 144 53.5
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 1.6e-28 129.8 145 50.3
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 1.6e-28 129.8 144 50.0
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 2.1e-28 129.4 144 50.0
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 2.8e-28 129.0 143 51.0
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 4.8e-28 128.3 145 48.3
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 8.1e-28 127.5 139 49.6
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 1.4e-27 126.7 142 52.1
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 2.4e-27 125.9 128 55.5
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 3.1e-27 125.6 128 53.1
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 4.0e-27 125.2 149 49.7
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 4.0e-27 125.2 140 50.7
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 4.0e-27 125.2 140 50.7
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 6.9e-27 124.4 124 50.8
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 9.0e-27 124.0 126 48.4
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 9.0e-27 124.0 135 50.4
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 3.4e-26 122.1 122 53.3
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 4.5e-26 121.7 124 52.4
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 1.9e-24 116.3 123 51.2
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 3.2e-24 115.5 143 49.0
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 9.3e-24 114.0 90 65.6
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 1.2e-23 113.6 143 49.0
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 3.9e-22 108.6 120 50.8
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 1.1e-21 107.1 124 49.2
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 8.1e-20 100.9 89 60.7
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 1.8e-19 99.8 106 52.8
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 3.1e-19 99.0 119 47.1
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 6.9e-19 97.8 132 45.5
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 9.0e-19 97.4 131 45.0
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 4.5e-18 95.1 138 38.4
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 8.4e-17 90.9 125 44.0
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 3.0e-14 82.4 138 39.9
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 5.1e-14 81.6 93 51.6
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 3.3e-13 79.0 93 50.5
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 2.1e-12 76.3 95 47.4
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 8.5e-09 64.3 119 37.0
PSO210G6050 Papaver somniferum HOM05D000045 ORTHO05D000067 1.6e-07 60.1 82 43.9
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea HOM05D005924 ORTHO05D007290 3.0e-06 55.8 53 54.7
C09p49910 Brassica napus HOM05D005924 ORTHO05D007290 8.7e-06 54.3 44 56.8


User provided reference genes

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