Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G1322 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 2.5e-71 271.9 130 100.0
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 4.2e-55 218.0 125 79.2
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 2.6e-52 208.8 125 76.0
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 7.5e-52 207.2 125 75.2
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 9.8e-52 206.8 126 74.6
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 1.3e-51 206.5 126 73.8
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 1.3e-51 206.5 125 76.0
COL.COLO4_07282 Corchorus olitorius HOM05D000764 ORTHO05D004953 1.7e-51 206.1 125 75.2
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 4.9e-51 204.5 125 74.4
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 4.9e-51 204.5 127 71.7
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 4.9e-51 204.5 125 74.4
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 6.3e-51 204.1 125 73.6
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 8.3e-51 203.8 125 72.8
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 1.8e-50 202.6 125 74.4
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 2.4e-50 202.2 125 72.8
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 3.1e-50 201.8 128 74.2
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 4.1e-50 201.4 125 73.6
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 4.1e-50 201.4 125 72.8
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 4.1e-50 201.4 125 72.0
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 4.1e-50 201.4 125 72.0
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 4.1e-50 201.4 125 73.6
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 5.4e-50 201.1 125 72.8
Actinidia15647 Actinidia chinensis HOM05D000764 ORTHO05D004953 9.2e-50 200.3 125 73.6
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 9.2e-50 200.3 125 72.0
vmacro06920 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 1.2e-49 199.9 125 70.4
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 2.0e-49 199.1 125 70.4
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 2.7e-49 198.7 126 72.2
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 2.7e-49 198.7 125 72.8
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 4.5e-49 198.0 127 68.5
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 5.9e-49 197.6 128 72.7
Hma1.2p1_0449F.1_g155100 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 7.8e-49 197.2 125 72.0
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 7.8e-49 197.2 125 71.2
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 1.0e-48 196.8 124 72.6
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 1.0e-48 196.8 125 72.0
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 1.0e-48 196.8 125 72.0
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 1.3e-48 196.4 125 71.2
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 1.3e-48 196.4 126 71.4
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.3e-48 196.4 125 70.4
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 1.3e-48 196.4 125 70.4
VMungo1080G1824 Vigna mungo HOM05D000764 ORTHO05D004953 1.3e-48 196.4 125 70.4
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 2.3e-48 195.7 127 66.9
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 2.3e-48 195.7 125 69.6
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 2.9e-48 195.3 123 71.5
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 5.0e-48 194.5 125 71.2
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 5.0e-48 194.5 125 69.6
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 5.0e-48 194.5 125 71.2
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 8.6e-48 193.7 124 70.2
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.1e-47 193.4 125 68.8
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 1.9e-47 192.6 125 70.4
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 1.9e-47 192.6 125 69.6
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 2.5e-47 192.2 125 68.0
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 3.3e-47 191.8 127 70.1
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 5.6e-47 191.0 125 69.6
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 5.6e-47 191.0 125 71.2
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 9.5e-47 190.3 125 70.4
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 9.5e-47 190.3 125 68.8
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 1.2e-46 189.9 125 68.8
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 1.6e-46 189.5 125 67.2
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 2.1e-46 189.1 125 67.2
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 2.8e-46 188.7 150 61.3
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 2.8e-46 188.7 125 68.8
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 3.6e-46 188.3 127 67.7
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 6.1e-46 187.6 125 71.2
SEGI_19391 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 6.1e-46 187.6 129 69.8
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 8.0e-46 187.2 127 66.9
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 1.0e-45 186.8 126 65.9
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 1.0e-45 186.8 125 66.4
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 1.8e-45 186.0 125 67.2
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 1.8e-45 186.0 126 66.7
Lj2A763G34 Lonicera japonica HOM05D000764 ORTHO05D004953 1.8e-45 186.0 138 63.8
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 2.3e-45 185.7 125 67.2
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 3.1e-45 185.3 125 65.6
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 4.0e-45 184.9 125 65.6
SEGI_38078 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 4.0e-45 184.9 128 69.5
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 5.2e-45 184.5 125 64.8
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 5.2e-45 184.5 124 66.1
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 6.8e-45 184.1 125 65.6
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 1.2e-44 183.3 125 64.8
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 1.2e-44 183.3 125 64.8
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 1.2e-44 183.3 125 65.6
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 2.0e-44 182.6 125 64.8
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 2.6e-44 182.2 126 65.9
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 2.6e-44 182.2 126 65.9
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 2.6e-44 182.2 126 65.9
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 2.6e-44 182.2 126 65.9
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 7.5e-44 180.6 128 64.8
Os05g0447580 Oryza sativa ssp. japonica HOM05D000764 ORTHO05D004953 1.3e-43 179.9 125 64.8
SalBow6G2556 Salvia bowleyana HOM05D000764 ORTHO05D004953 1.3e-43 179.9 125 64.8
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 1.7e-43 179.5 124 67.7
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.7e-43 179.5 124 67.7
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 2.2e-43 179.1 124 67.7
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 2.9e-43 178.7 124 67.7
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 3.7e-43 178.3 124 66.9
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 4.9e-43 177.9 124 66.9
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 4.9e-43 177.9 126 65.9
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 5.4e-42 174.5 125 64.0
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 9.2e-42 173.7 125 63.2
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 1.6e-41 172.9 125 62.4
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 8.6e-40 167.2 127 63.8
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 1.5e-36 156.4 97 71.1
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 2.0e-36 156.0 90 78.9
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 4.4e-36 154.8 101 68.3
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.6e-30 136.3 127 54.3
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.6e-30 136.3 127 54.3
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 1.6e-22 109.8 124 42.7
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 1.2e-20 103.6 125 42.4
Pp3c7_4610 Physcomitrium patens HOM05D000764 ORTHO05D004953 8.4e-19 97.4 125 41.6
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 9.2e-18 94.0 97 49.5
BcaC03g15090 Brassica carinata HOM05D000951 ORTHO05D032059 1.5e-12 76.6 44 72.7
BolC2t08722H Brassica oleracea HOM05D000951 ORTHO05D032059 1.5e-12 76.6 44 72.7
AagrBONN_evm.TU.Sc2ySwM_117.2245 Anthoceros agrestis HOM05D000764 ORTHO05D004953 2.4e-10 69.3 133 33.1
SHI31294 Sapria himalayana HOM05D000764 ORTHO05D004953 2.7e-09 65.9 75 48.0
VMungo1383G3575 Vigna mungo HOM05D000764 ORTHO05D004953 1.3e-08 63.5 59 45.8
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 2.1e-06 56.2 53 49.1


User provided reference genes

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