Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 4.7e-92 341.3 183 100.0
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 2.8e-84 315.5 183 94.0
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 3.3e-53 212.2 180 67.8
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 3.4e-50 202.2 175 66.9
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 1.3e-49 200.3 180 66.1
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 4.9e-49 198.4 187 64.7
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 8.4e-49 197.6 176 65.9
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 2.4e-48 196.1 182 65.4
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 2.4e-48 196.1 175 65.7
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 3.2e-48 195.7 182 63.2
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 3.2e-48 195.7 170 67.6
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 7.1e-48 194.5 178 64.0
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 9.2e-48 194.1 169 66.9
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.6e-47 193.4 176 64.2
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 1.6e-47 193.4 176 64.2
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 2.1e-47 193.0 182 63.2
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 2.1e-47 193.0 177 64.4
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 2.7e-47 192.6 182 63.2
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 4.6e-47 191.8 172 64.5
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 6.0e-47 191.4 175 64.6
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 6.0e-47 191.4 169 66.3
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 1.0e-46 190.7 178 63.5
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 1.7e-46 189.9 179 64.2
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 1.7e-46 189.9 163 67.5
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 5.1e-46 188.3 147 72.8
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 5.1e-46 188.3 182 62.6
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 5.1e-46 188.3 176 64.8
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 5.1e-46 188.3 178 62.4
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 1.5e-45 186.8 178 65.2
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 1.5e-45 186.8 178 62.4
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 2.5e-45 186.0 177 66.1
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 3.3e-45 185.7 177 62.7
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 3.3e-45 185.7 177 62.7
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 3.3e-45 185.7 177 62.7
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 4.3e-45 185.3 172 64.5
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 5.6e-45 184.9 178 60.7
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 5.6e-45 184.9 178 60.7
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 9.6e-45 184.1 173 64.2
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 9.6e-45 184.1 190 59.5
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 1.2e-44 183.7 148 70.9
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 1.2e-44 183.7 177 62.1
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 1.2e-44 183.7 179 63.7
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 1.6e-44 183.3 179 61.5
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 1.6e-44 183.3 178 62.9
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 2.1e-44 183.0 150 67.3
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 2.8e-44 182.6 182 60.4
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 2.8e-44 182.6 149 67.1
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 3.6e-44 182.2 150 67.3
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 3.6e-44 182.2 158 64.6
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 3.6e-44 182.2 150 67.3
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 3.6e-44 182.2 181 61.3
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 4.7e-44 181.8 161 64.0
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 4.7e-44 181.8 161 64.0
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 4.7e-44 181.8 150 67.3
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 6.2e-44 181.4 186 62.4
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 6.2e-44 181.4 160 68.1
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 8.1e-44 181.0 161 64.0
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 8.1e-44 181.0 190 60.5
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 1.1e-43 180.6 136 70.6
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 1.1e-43 180.6 169 63.9
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 1.4e-43 180.3 148 68.2
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 1.8e-43 179.9 179 62.0
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 1.8e-43 179.9 178 61.2
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 2.4e-43 179.5 175 62.3
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 3.1e-43 179.1 144 70.1
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 4.0e-43 178.7 150 66.7
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 4.0e-43 178.7 175 62.3
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 5.2e-43 178.3 173 59.5
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 9.0e-43 177.6 175 61.1
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 1.2e-42 177.2 182 59.9
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 1.2e-42 177.2 161 63.4
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 1.2e-42 177.2 178 59.0
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 1.5e-42 176.8 217 51.6
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 1.5e-42 176.8 174 59.8
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 2.6e-42 176.0 175 62.3
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 3.4e-42 175.6 179 59.2
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 4.4e-42 175.3 149 67.1
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 4.4e-42 175.3 179 61.5
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 4.4e-42 175.3 176 60.8
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 9.9e-42 174.1 123 76.4
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 9.9e-42 174.1 177 61.6
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 9.9e-42 174.1 166 63.3
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 2.2e-41 172.9 175 60.0
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 2.2e-41 172.9 174 61.5
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 2.9e-41 172.6 144 68.1
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 3.8e-41 172.2 127 76.4
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 6.4e-41 171.4 160 62.5
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 1.1e-40 170.6 166 60.8
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 1.1e-40 170.6 178 57.3
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 1.1e-40 170.6 166 60.8
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 1.1e-40 170.6 177 59.3
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 3.2e-40 169.1 120 76.7
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 3.2e-40 169.1 148 64.2
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 5.4e-40 168.3 166 61.4
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 7.1e-40 167.9 120 75.8
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 7.1e-40 167.9 166 60.8
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 7.1e-40 167.9 166 60.8
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 7.1e-40 167.9 149 65.8
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 7.1e-40 167.9 167 61.7
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 4.6e-39 165.2 165 63.6
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 4.6e-39 165.2 176 56.8
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 7.8e-39 164.5 169 58.6
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 8.7e-38 161.0 177 57.1
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 1.5e-37 160.2 112 78.6
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 5.6e-37 158.3 173 58.4
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 9.6e-37 157.5 267 41.6
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 2.4e-35 152.9 171 55.6
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 2.1e-31 139.8 116 67.2
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 7.9e-31 137.9 168 50.6
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 7.9e-31 137.9 177 52.0
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 1.3e-30 137.1 136 59.6
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 1.1e-27 127.5 157 52.9
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 4.5e-26 122.1 125 54.4
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 4.9e-25 118.6 176 46.6
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 2.4e-24 116.3 129 54.3
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 3.9e-22 109.0 74 70.3
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 5.1e-22 108.6 115 58.3
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 5.1e-22 108.6 120 52.5
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 3.3e-21 105.9 100 58.0
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 1.3e-20 104.0 149 46.3
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 1.6e-20 103.6 352 30.4
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 4.6e-15 85.5 78 57.7
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 1.3e-14 84.0 105 48.6
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 6.7e-14 81.6 71 69.0
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 2.2e-12 76.6 107 52.3
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 4.8e-12 75.5 81 51.9
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 3.1e-11 72.8 104 51.9
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 2.0e-10 70.1 110 47.3
QL11p029078 Quercus lobata HOM05D006014 ORTHO05D013998 1.4e-06 57.4 40 77.5
Atru.chr2.2408 Acer truncatum HOM05D006014 ORTHO05D007608 1.8e-06 57.0 47 74.5


User provided reference genes

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