Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE10G1265 Ceratophyllum demersum HOM05D005452 ORTHO05D006618 3.1e-51 204.9 107 100.0
Lj5g0027337 Lotus japonicus HOM05D005452 ORTHO05D006618 1.4e-27 126.3 113 62.8
Lj4g0014743 Lotus japonicus HOM05D005452 ORTHO05D006618 3.1e-27 125.2 113 61.9
Psat5g193600 Pisum sativum HOM05D005452 ORTHO05D006618 5.8e-26 120.9 107 59.8
CSS0031935 Camellia sinensis var. sinensis HOM05D005452 ORTHO05D006618 7.6e-26 120.6 108 59.3
Medtr3g464760 Medicago truncatula HOM05D005452 ORTHO05D006618 7.6e-26 120.6 113 59.3
Dinv15209 Davidia involucrata HOM05D005452 ORTHO05D006618 1.7e-25 119.4 107 57.0
Atru.chr11.2163 Acer truncatum HOM05D005452 ORTHO05D006618 2.2e-25 119.0 86 67.4
Prupe.5G046400 Prunus persica HOM05D005452 ORTHO05D006618 2.9e-25 118.6 111 55.9
TAR371G0357 Trochodendron aralioides HOM05D005452 ORTHO05D006618 4.9e-25 117.9 110 61.8
Lalb_Chr01g0021741 Lupinus albus HOM05D005452 ORTHO05D006618 1.1e-24 116.7 113 56.6
AUR62024237 Chenopodium quinoa HOM05D005452 ORTHO05D006618 1.4e-24 116.3 104 57.7
Ca_14963_v3 Cicer arietinum L. HOM05D005452 ORTHO05D006618 1.9e-24 115.9 113 56.6
Lalb_Chr03g0040661 Lupinus albus HOM05D005452 ORTHO05D006618 1.9e-24 115.9 114 56.1
Nn1g08774 Nelumbo nucifera HOM05D005452 ORTHO05D006618 1.9e-24 115.9 110 59.1
PGR102G3216 Punica granatum HOM05D005452 ORTHO05D006618 1.9e-24 115.9 105 58.1
TAR629G2696 Trochodendron aralioides HOM05D005452 ORTHO05D006618 1.9e-24 115.9 110 59.1
Ciclev10033123m.g Citrus clementina HOM05D005452 ORTHO05D006618 2.4e-24 115.5 84 66.7
VMungo1383G1569 Vigna mungo HOM05D005452 ORTHO05D006618 2.4e-24 115.5 113 55.8
EL10Ac5g10516 Beta vulgaris HOM05D005452 ORTHO05D006618 5.4e-24 114.4 105 53.3
Glyma.09G244200 Glycine max HOM05D005452 ORTHO05D006618 7.1e-24 114.0 110 55.5
Sc04g0009650 Simmondsia chinensis HOM05D005452 ORTHO05D006618 7.1e-24 114.0 107 57.0
TPR.G32914 Trifolium pratense HOM05D005452 ORTHO05D006618 7.1e-24 114.0 111 57.7
Glyma.18G249300 Glycine max HOM05D005452 ORTHO05D006618 9.3e-24 113.6 113 54.0
TWI36G1628 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 9.3e-24 113.6 110 55.5
GSVIVG01003295001 Vitis vinifera HOM05D005452 ORTHO05D006618 9.3e-24 113.6 107 57.0
ClCG10G012250 Citrullus lanatus HOM05D005452 ORTHO05D006618 1.2e-23 113.2 108 57.4
Actinidia01359 Actinidia chinensis HOM05D005452 ORTHO05D006618 2.1e-23 112.5 108 57.4
Solyc10g054060.2 Solanum lycopersicum HOM05D005452 ORTHO05D006618 2.1e-23 112.5 103 56.3
Sed0011581 Sechium edule HOM05D005452 ORTHO05D006618 2.7e-23 112.1 108 54.6
Haze_12270 Corylus avellana HOM05D004112 ORTHO05D004739 3.5e-23 111.7 110 53.6
Phvul.008G048300 Phaseolus vulgaris HOM05D005452 ORTHO05D006618 3.5e-23 111.7 106 56.6
THA.LOC104824009 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 3.5e-23 111.7 84 67.9
VMungo1080G1735 Vigna mungo HOM05D005452 ORTHO05D006618 3.5e-23 111.7 110 57.3
HanXRQChr12g0371911 Helianthus annuus HOM05D005452 ORTHO05D006618 6.0e-23 110.9 107 50.5
QL03p056962 Quercus lobata HOM05D005452 ORTHO05D006618 6.0e-23 110.9 92 62.0
Sopen10g023920 Solanum pennellii HOM05D005452 ORTHO05D006618 6.0e-23 110.9 104 55.8
Actinidia08127 Actinidia chinensis HOM05D005452 ORTHO05D006618 7.9e-23 110.5 111 54.1
THA.LOC104805276 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 7.9e-23 110.5 87 64.4
CiPaw.05G172100 Carya illinoinensis HOM05D005452 ORTHO05D006618 1.0e-22 110.2 81 66.7
Lj4g0021307 Lotus japonicus HOM05D005452 ORTHO05D006618 1.3e-22 109.8 107 56.1
Thecc.02G263300 Theobroma cacao HOM05D005452 ORTHO05D006618 1.8e-22 109.4 81 67.9
ATR0691G211 Amborella trichopoda HOM05D005452 ORTHO05D006618 2.3e-22 109.0 90 66.7
MD09G1284200 Malus domestica HOM05D005452 ORTHO05D006618 2.3e-22 109.0 111 50.5
RcHm_v2.0_Chr7g0208311 Rosa chinensis HOM05D005452 ORTHO05D006618 3.9e-22 108.2 85 62.4
Cfa009234 Carpinus fangiana HOM05D005452 ORTHO05D006618 5.1e-22 107.8 107 54.2
Lsat_1_v5_gn_4_85301 Lactuca sativa HOM05D005452 ORTHO05D006618 5.1e-22 107.8 104 48.1
HPP92_017381 Vanilla planifolia HOM05D005452 ORTHO05D006618 5.1e-22 107.8 108 54.6
Duzib268G1139 Durio zibethinus HOM05D005452 ORTHO05D006618 6.7e-22 107.5 81 67.9
vmacro06707 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 6.7e-22 107.5 105 54.3
AUR62005503 Chenopodium quinoa HOM05D005452 ORTHO05D006618 8.7e-22 107.1 97 56.7
Hund25399 Selenicereus undatus HOM05D005452 ORTHO05D006618 8.7e-22 107.1 81 65.4
TWI18G1019 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 8.7e-22 107.1 111 52.3
CANSAT11G1680 Cannabis sativa HOM05D005452 ORTHO05D006618 1.1e-21 106.7 107 56.1
FvH4_5g21170 Fragaria vesca HOM05D005452 ORTHO05D006618 1.1e-21 106.7 88 60.2
Lsat_1_v5_gn_8_152800 Lactuca sativa HOM05D005452 ORTHO05D006618 1.5e-21 106.3 104 47.1
PSO210G2974 Papaver somniferum HOM05D005452 ORTHO05D006618 1.5e-21 106.3 111 54.1
Hund06040 Selenicereus undatus HOM05D005452 ORTHO05D006618 1.5e-21 106.3 104 53.8
CiPaw.04G056800 Carya illinoinensis HOM05D005452 ORTHO05D006618 1.9e-21 105.9 78 65.4
ECA233G5110 Erigeron canadensis HOM05D005452 ORTHO05D006618 2.5e-21 105.5 109 46.8
Rhsim12G0039600 Rhododendron simsii HOM05D005452 ORTHO05D006618 2.5e-21 105.5 78 67.9
SHI03748 Sapria himalayana HOM05D005452 ORTHO05D006618 2.5e-21 105.5 111 54.1
Eucgr.B03269 Eucalyptus grandis HOM05D005452 ORTHO05D006618 3.3e-21 105.1 110 55.5
FAN13G0782 Fragaria x ananassa HOM05D005452 ORTHO05D006618 4.3e-21 104.8 88 59.1
Manes.13G021600 Manihot esculenta HOM05D005452 ORTHO05D006618 4.3e-21 104.8 81 65.4
CsaV3_3G032030 Cucumis sativus L. HOM05D005452 ORTHO05D006618 5.6e-21 104.4 108 53.7
Lj3C54T6 Lonicera japonica HOM05D005452 ORTHO05D006618 5.6e-21 104.4 77 66.2
Carub.0005s0428 Capsella rubella HOM05D005452 ORTHO05D006618 7.4e-21 104.0 107 54.2
DCAR_003344 Daucus carota HOM05D005452 ORTHO05D006618 7.4e-21 104.0 77 64.9
MBI15_g04991_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 7.4e-21 104.0 80 68.8
Sp2g15510 Schrenkiella parvula HOM05D005452 ORTHO05D006618 7.4e-21 104.0 107 54.2
Aa31LG2G6150 Aethionema arabicum HOM05D005452 ORTHO05D006618 1.6e-20 102.8 104 55.8
Nitab4.5_0000524g0050 Nicotiana tabacum HOM05D005452 ORTHO05D006618 1.6e-20 102.8 107 52.3
Oeu056705.1 Olea europaea HOM05D005452 ORTHO05D006618 1.6e-20 102.8 104 51.9
MD06G1040200 Malus domestica HOM05D005452 ORTHO05D006618 2.1e-20 102.4 81 59.3
PSO017G6805 Papaver somniferum HOM05D005452 ORTHO05D006618 2.1e-20 102.4 111 52.3
COL.COLO4_23485 Corchorus olitorius HOM05D005452 ORTHO05D006618 2.8e-20 102.1 78 65.4
Thhalv10005186m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 2.8e-20 102.1 107 54.2
BcaB07g30231 Brassica carinata HOM05D005452 ORTHO05D006618 3.7e-20 101.7 107 54.2
BcaC03g17336 Brassica carinata HOM05D005452 ORTHO05D006618 3.7e-20 101.7 107 54.2
CAN.G128.103 Capsicum annuum HOM05D005452 ORTHO05D000001 3.7e-20 101.7 103 55.3
Nitab4.5_0004217g0010 Nicotiana tabacum HOM05D001410 ORTHO05D006618 4.8e-20 101.3 106 52.8
unitig_22.g6942 Utricularia gibba HOM05D005452 ORTHO05D006618 4.8e-20 101.3 101 49.5
AL5G15130 Arabidopsis lyrata HOM05D005452 ORTHO05D006618 6.2e-20 100.9 107 52.3
FAN04G1087 Fragaria x ananassa HOM05D005452 ORTHO05D006618 6.2e-20 100.9 79 62.0
FAN18G0628 Fragaria x ananassa HOM05D005452 ORTHO05D006618 6.2e-20 100.9 80 61.2
MELO3C030920.2 Cucumis melo HOM05D005452 ORTHO05D006618 8.1e-20 100.5 105 54.3
MD02G1109400 Malus domestica HOM05D005452 ORTHO05D006618 8.1e-20 100.5 81 58.0
CARHR147370 Cardamine hirsuta HOM05D005452 ORTHO05D006618 1.1e-19 100.1 107 54.2
Cpa.g.c31584 Carica papaya HOM05D005452 ORTHO05D006618 1.1e-19 100.1 88 60.2
Cc01_g03580 Coffea canephora HOM05D005452 ORTHO05D006618 1.1e-19 100.1 107 52.3
Thhalv10005184m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 1.1e-19 100.1 108 52.8
FAN08G2976 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.1e-19 100.1 83 59.0
Hma1.2p1_0079F.1_g041110 Hydrangea macrophylla HOM05D005452 ORTHO05D006618 1.4e-19 99.8 76 63.2
Nitab4.5_0002322g0150 Nicotiana tabacum HOM05D001410 ORTHO05D006618 1.4e-19 99.8 106 51.9
SalBow6G0301 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.4e-19 99.8 88 58.0
SGA_v2.0_scaffold293G47424 Striga asiatica HOM05D005452 ORTHO05D006618 1.4e-19 99.8 77 63.6
Peaxi162Scf00067g00116 Petunia axillaris HOM05D005452 ORTHO05D006618 1.8e-19 99.4 102 54.9
Zm00001eb053730 Zea mays HOM05D005452 ORTHO05D006618 1.8e-19 99.4 102 56.9
A02p34530 Brassica napus HOM05D005452 ORTHO05D006618 3.1e-19 98.6 104 53.8
C02p52850 Brassica napus HOM05D005452 ORTHO05D006618 3.1e-19 98.6 104 53.8
C07p35420 Brassica napus HOM05D005452 ORTHO05D006618 3.1e-19 98.6 104 53.8
BraA02t08463Z Brassica rapa HOM05D005452 ORTHO05D006618 3.1e-19 98.6 104 53.8
A06p42060 Brassica napus HOM05D005452 ORTHO05D006618 4.0e-19 98.2 104 53.8
BolC7t44066H Brassica oleracea HOM05D005452 ORTHO05D006618 4.0e-19 98.2 104 52.9
BraA06t27123Z Brassica rapa HOM05D005452 ORTHO05D006618 4.0e-19 98.2 104 53.8
SalBow6G0335 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.0e-19 98.2 86 59.3
SalBow6G1267 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.0e-19 98.2 86 59.3
SalBow6G2856 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.0e-19 98.2 86 59.3
SalBow6G4340 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.0e-19 98.2 86 59.3
Potri.010G048600 Populus trichocarpa HOM05D005452 ORTHO05D006618 5.3e-19 97.8 90 60.0
Gohir.A05G223400 Gossypium hirsutum HOM05D005452 ORTHO05D006618 6.9e-19 97.4 81 63.0
Gorai.009G233700 Gossypium raimondii HOM05D005452 ORTHO05D006618 6.9e-19 97.4 81 63.0
Peaxi162Scf00128g00434 Petunia axillaris HOM05D005452 ORTHO05D006618 6.9e-19 97.4 77 64.9
AT3G26360 Arabidopsis thaliana HOM05D005452 ORTHO05D006618 9.0e-19 97.1 107 52.3
SalBow6G6484 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.0e-18 95.9 88 56.8
SGA_v2.0_scaffold12G06036 Striga asiatica HOM05D005452 ORTHO05D006618 2.0e-18 95.9 78 62.8
Zm00001eb217020 Zea mays HOM05D005452 ORTHO05D006618 2.0e-18 95.9 91 59.3
SalBow6G3385 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.6e-18 95.5 85 57.6
SEGI_27388 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 3.4e-18 95.1 78 62.8
SEGI_39778 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 3.4e-18 95.1 78 62.8
SalBow6G4107 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.5e-18 94.7 82 59.8
SalBow6G4977 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.5e-18 94.7 82 59.8
BolC2t11364H Brassica oleracea HOM05D005452 ORTHO05D006618 5.8e-18 94.4 104 51.9
Sabra10G0020400 Salix brachista HOM05D004112 ORTHO05D004739 5.8e-18 94.4 84 60.7
Gohir.D05G226100 Gossypium hirsutum HOM05D005452 ORTHO05D006618 1.3e-17 93.2 78 62.8
Oeu049174.1 Olea europaea HOM05D005452 ORTHO05D006618 1.3e-17 93.2 104 51.0
Aqoxy3G01257 Aquilegia oxysepala HOM05D005452 ORTHO05D006618 4.9e-17 91.3 111 48.6
Migut.K00615 Erythranthe guttata HOM05D005452 ORTHO05D006618 1.1e-16 90.1 81 54.3
MD04G1159200 Malus domestica HOM05D005452 ORTHO05D006618 1.6e-15 86.3 81 51.9
Os03g0694700 Oryza sativa ssp. japonica HOM05D005452 ORTHO05D006618 2.7e-15 85.5 81 61.7
MD12G1125700 Malus domestica HOM05D005452 ORTHO05D006618 7.9e-15 84.0 81 50.6
SalBow6G5661 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.9e-15 84.0 74 62.2
MBI15_g11303_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 3.0e-14 82.0 87 56.3
vmacro01118 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 8.2e-12 73.9 85 48.2
Zm00001eb217070 Zea mays HOM05D000876 ORTHO05D000285 3.1e-11 72.0 92 50.0
Medtr3g450960 Medicago truncatula HOM05D005452 ORTHO05D006618 3.8e-09 65.1 57 61.4
Nn1g09342 Nelumbo nucifera HOM05D005452 ORTHO05D006618 4.9e-09 64.7 60 56.7
unitig_8.g2920 Utricularia gibba HOM05D005452 ORTHO05D006618 6.7e-06 54.3 53 49.1


User provided reference genes

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